Lineage for d2ab4a1 (2ab4 A:229-308)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2823864Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2823865Superfamily b.122.1: PUA domain-like [88697] (15 families) (S)
  5. 2823866Family b.122.1.1: PUA domain [88698] (6 proteins)
    RNA-binding domain
  6. 2823889Protein Pseudouridine synthase II TruB, C-terminal domain [88699] (5 species)
  7. 2823905Species Thermotoga maritima [TaxId:2336] [102023] (4 PDB entries)
  8. 2823906Domain d2ab4a1: 2ab4 A:229-308 [126505]
    Other proteins in same PDB: d2ab4a2
    protein/RNA complex; complexed with zn

Details for d2ab4a1

PDB Entry: 2ab4 (more details), 2.4 Å

PDB Description: dissecting the roles of a strictly conserved tyrosine in substrate recognition and catalysis by pseudouridine 55 synthase
PDB Compounds: (A:) tRNA pseudouridine synthase B

SCOPe Domain Sequences for d2ab4a1:

Sequence, based on SEQRES records: (download)

>d2ab4a1 b.122.1.1 (A:229-308) Pseudouridine synthase II TruB, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

Sequence, based on observed residues (ATOM records): (download)

>d2ab4a1 b.122.1.1 (A:229-308) Pseudouridine synthase II TruB, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

SCOPe Domain Coordinates for d2ab4a1:

Click to download the PDB-style file with coordinates for d2ab4a1.
(The format of our PDB-style files is described here.)

Timeline for d2ab4a1: