Lineage for d2ab4a1 (2ab4 A:229-308)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2076966Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2076967Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)
  5. 2076968Family b.122.1.1: PUA domain [88698] (6 protein domains)
    RNA-binding domain
  6. 2076991Protein Pseudouridine synthase II TruB, C-terminal domain [88699] (5 species)
  7. 2077007Species Thermotoga maritima [TaxId:2336] [102023] (4 PDB entries)
  8. 2077009Domain d2ab4a1: 2ab4 A:229-308 [126505]
    Other proteins in same PDB: d2ab4a2
    protein/RNA complex; complexed with zn

Details for d2ab4a1

PDB Entry: 2ab4 (more details), 2.4 Å

PDB Description: Dissecting the Roles of a Strictly Conserved Tyrosine in Substrate Recognition and Catalysis by Pseudouridine 55 Synthase
PDB Compounds: (A:) tRNA pseudouridine synthase B

SCOPe Domain Sequences for d2ab4a1:

Sequence, based on SEQRES records: (download)

>d2ab4a1 b.122.1.1 (A:229-308) Pseudouridine synthase II TruB, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

Sequence, based on observed residues (ATOM records): (download)

>d2ab4a1 b.122.1.1 (A:229-308) Pseudouridine synthase II TruB, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

SCOPe Domain Coordinates for d2ab4a1:

Click to download the PDB-style file with coordinates for d2ab4a1.
(The format of our PDB-style files is described here.)

Timeline for d2ab4a1: