Lineage for Superfamily b.122.1: PUA domain-like

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2076966Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2076967Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)

Families:

  1. 2076968b.122.1.1: PUA domain [88698] (6 protein domains)
    RNA-binding domain
  2. 2077019b.122.1.2: YggJ N-terminal domain-like [89451] (3 protein domains)
  3. 2077038b.122.1.3: ATP sulfurylase N-terminal domain [63801] (1 protein)
    contains extra structures; some similarity to the PK beta-barrel domain
    automatically mapped to Pfam PF14306
  4. 2077074b.122.1.4: Hypothetical protein EF3133 [110339] (1 protein)
    Pfam PF06171; DUF984
  5. 2077079b.122.1.5: Hypothetical protein TTHA0113 [117348] (2 protein domains)
    Pfam PF04266; DUF437
  6. 2077086b.122.1.6: ProFAR isomerase associated domain [117351] (3 protein domains)
    Pfam PF07060; DUF1530
  7. 2077099b.122.1.7: yqfB-like [117356] (1 protein)
    Pfam PF06164; DUF978
  8. 2077103b.122.1.8: Atu2648/PH1033-like [141703] (7 protein domains)
    Pfam PF01878; DUF55
  9. 2077130b.122.1.9: Hypothetical RNA methyltransferase domain (HRMD) [141716] (3 protein domains)
    N-terminal part of Pfam PF03602, structurally similar to PUA domain family
  10. 2077151b.122.1.10: LON domain-like [141723] (3 protein domains)
    Pfam PF02190
  11. 2077168b.122.1.11: PrgU-like [159365] (2 protein domains)
    Pfam PF09627
  12. 2077175b.122.1.12: SRA domain-like [159368] (2 protein domains)
    Pfam PF02182; recognizes the modified cytosine base (m5C) by flipping it out of DNA
  13. 2077214b.122.1.13: YtmB-like [159372] (1 protein)
    PfamB PB020780
    automatically mapped to Pfam PF10763
  14. 2077225b.122.1.0: automated matches [191599] (1 protein)
    not a true family

More info for Superfamily b.122.1: PUA domain-like

Timeline for Superfamily b.122.1: PUA domain-like: