PDB entry 1ze1

View 1ze1 on RCSB PDB site
Description: Conformational Change of Pseudouridine 55 Synthase upon Its Association with RNA Substrate
Class: lyase
Keywords: RNA modification enzyme, LYASE
Deposited on 2005-04-16, released 2005-04-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.235
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA pseudouridine synthase B
    Species: Thermotoga maritima [TaxId:2336]
    Gene: truB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZW0 (0-End)
      • see remark 999 (295)
      • conflict (296)
      • see remark 999 (306)
    Domains in SCOPe 2.08: d1ze1a1, d1ze1a2
  • Chain 'B':
    Compound: tRNA pseudouridine synthase B
    Species: Thermotoga maritima [TaxId:2336]
    Gene: truB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZW0 (0-End)
      • see remark 999 (295)
      • conflict (296)
      • see remark 999 (306)
    Domains in SCOPe 2.08: d1ze1b1, d1ze1b2
  • Chain 'C':
    Compound: tRNA pseudouridine synthase B
    Species: Thermotoga maritima [TaxId:2336]
    Gene: truB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZW0 (0-End)
      • see remark 999 (295)
      • conflict (296)
      • see remark 999 (306)
    Domains in SCOPe 2.08: d1ze1c1, d1ze1c2
  • Chain 'D':
    Compound: tRNA pseudouridine synthase B
    Species: Thermotoga maritima [TaxId:2336]
    Gene: truB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZW0 (0-End)
      • see remark 999 (295)
      • conflict (296)
      • see remark 999 (306)
    Domains in SCOPe 2.08: d1ze1d1, d1ze1d2
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ze1A (A:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >1ze1A (A:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ze1B (B:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >1ze1B (B:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqt

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ze1C (C:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >1ze1C (C:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqt

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ze1D (D:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppaysak
kykgerlyklaregkiinlppkrvkifkiwdvniegrdvsfrvevspgtyirslcmdigy
klgcgatavelvresvgphtieeslnvfeaapeeienriiplekclewlprvvvhqestk
milngsqihlemlkewdgfkkgevvrvfneegrllalaeaernssfletlrkherqrrvl
tlrkvfqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >1ze1D (D:)
mkhgilvaykpkgptshdvvdevrkklktrkvghggtldpfacgvliigvnqgtrilefy
kdlkkvywvkmrlglitetfditgevveerecnvteeeireaifsfvgeydqvppapkrv
kifkiwdvniegrdvsfrvevspgtyirslcmdigyklgcgatavelvresvgphtiees
lnvfeaapeeienriiplekclewlprvvvhqestkmilngsqihlemlkewdgfkkgev
vrvfneegrllalaeaernssfletlrkherqrrvltlrkvfqt