Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1785878Fold b.36: PDZ domain-like [50155] (1 superfamily)
    contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
  4. 1785879Superfamily b.36.1: PDZ domain-like [50156] (7 families) (S)
    peptide-binding domain
  5. 1786401Family b.36.1.0: automated matches [191362] (1 protein)
    not a true family
  6. 1786402Protein automated matches [190436] (6 species)
    not a true protein

Species:

  1. 1786403Escherichia coli K-12 [TaxId:83333] [233623] (1 PDB entry)
  2. 1786416Human (Homo sapiens) [TaxId:9606] [187333] (84 PDB entries)
    1. Domain for 2d92:
    2. Domain for 2daz:
    3. Domain for 2db5:
    4. Domain for 2dc2:
    5. Domain for 2dkr:
    6. Domain for 2dls:
    7. Domain for 2dlu:
    8. Domain for 2dm8:
    9. Domain for 2dmz:
    10. Domain for 2e7k:
    11. Domain for 2edp:
    12. Domain for 2edv:
    13. Domain for 2eeh:
    14. Domain for 2eei:
    15. Domain for 2eej:
    16. Domain for 2ehr:
    17. Domain for 2eno:
    18. Domain for 2gzv:
    19. Domains for 2i1n:
      1. 1786484Domain d2i1na_: 2i1n A: [204680]
        automated match to d1x5qa1
        complexed with na
      2. 1786485Domain d2i1nb_: 2i1n B: [204681]
        automated match to d1x5qa1
        complexed with na
    20. Domain for 2iwn:
    21. Domains for 2iwo:
      1. 1786476Domain d2iwoa_: 2iwo A: [204875]
        automated match to d1n7ea_
      2. 1786477Domain d2iwob_: 2iwo B: [204876]
        automated match to d1n7ea_
    22. Domains for 2iwp:
      1. 1786523Domain d2iwpa_: 2iwp A: [204877]
        automated match to d1n7ea_
      2. 1786524Domain d2iwpb_: 2iwp B: [204878]
        automated match to d1n7ea_
    23. Domains for 2jik:
      1. 1786431Domain d2jika_: 2jik A: [166209]
        automated match to d1qlca_
      2. 1786432Domain d2jikb_: 2jik B: [166210]
        automated match to d1qlca_
    24. Domains for 2jil:
      1. 1786452Domain d2jila_: 2jil A: [205057]
        automated match to d2ozfa_
        complexed with edo, scn
      2. 1786453Domain d2jilb_: 2jil B: [205058]
        automated match to d2ozfa_
        complexed with edo, scn
    25. Domain for 2jin:
    26. Domain for 2kg2:
    27. Domain for 2kom:
    28. Domain for 2kv8:
    29. Domain for 2l4s:
    30. Domain for 2l4t:
    31. Domain for 2m0t:
    32. Domain for 2m0u:
    33. Domain for 2omj:
    34. Domains for 2p3w:
      1. 1786474Domain d2p3wa_: 2p3w A: [166998]
        automated match to d2pzda1
      2. 1786475Domain d2p3wb_: 2p3w B: [166999]
        automated match to d2pzda1
    35. Domains for 2pnt:
      1. 1786512Domain d2pnta_: 2pnt A: [167228]
        automated match to d1q3oa_
        complexed with cl
      2. 1786513Domain d2pntb_: 2pnt B: [167229]
        automated match to d1q3oa_
        complexed with cl
    36. Domains for 2pzd:
      1. 1786532Domain d2pzda_: 2pzd A: [149962]
        automated match to d2p3wa_
        complexed with edo
      2. 1786533Domain d2pzdb_: 2pzd B: [149963]
        automated match to d2p3wa_
        complexed with edo
    37. Domains for 2q3g:
      1. 1786417Domain d2q3ga_: 2q3g A: [167406]
        automated match to d1rgwa_
        complexed with cl, edo
      2. 1786418Domain d2q3gb_: 2q3g B: [167407]
        automated match to d1rgwa_
        complexed with cl, edo
    38. Domain for 2q9v:
    39. Domains for 2r4h:
      1. 1786506Domain d2r4ha_: 2r4h A: [205965]
        automated match to d2q3gb_
        complexed with his; mutant
      2. 1786507Domain d2r4hb_: 2r4h B: [205966]
        automated match to d2q3gb_
        complexed with his; mutant
      3. 1786508Domain d2r4hc_: 2r4h C: [205967]
        automated match to d2q3gb_
        complexed with his; mutant
    40. Domains for 2uzc:
      1. 1786444Domain d2uzca_: 2uzc A: [206187]
        automated match to d2v1wa_
        complexed with cl, edo
      2. 1786445Domain d2uzcb_: 2uzc B: [206188]
        automated match to d2v1wa_
        complexed with cl, edo
      3. 1786446Domain d2uzcc_: 2uzc C: [206189]
        automated match to d2v1wa_
        complexed with cl, edo
      4. 1786447Domain d2uzcd_: 2uzc D: [206190]
        automated match to d2v1wa_
        complexed with cl, edo
      5. 1786448Domain d2uzce_: 2uzc E: [206191]
        automated match to d2v1wa_
        complexed with cl, edo
    41. Domains for 2v1w:
      1. 1786482Domain d2v1wa_: 2v1w A: [168294]
        automated match to d1rgwa_
        complexed with 1pe, edo, mg
      2. 1786483Domain d2v1wb_: 2v1w B: [168295]
        automated match to d1rgwa_
        complexed with 1pe, edo, mg
    42. Domains for 2v90:
      1. 1786499Domain d2v90a_: 2v90 A: [168381]
        automated match to d1g9oa_
        complexed with so4
      2. 1786500Domain d2v90b_: 2v90 B: [168382]
        automated match to d1g9oa_
        complexed with so4
      3. 1786501Domain d2v90c_: 2v90 C: [168383]
        automated match to d1g9oa_
        complexed with so4
      4. 1786502Domain d2v90d_: 2v90 D: [168384]
        automated match to d1g9oa_
        complexed with so4
      5. 1786503Domain d2v90e_: 2v90 E: [168385]
        automated match to d1g9oa_
        complexed with so4
      6. 1786504Domain d2v90f_: 2v90 F: [168386]
        automated match to d1g9oa_
        complexed with so4
    43. Domains for 2vsp:
      1. 1786528Domain d2vspa_: 2vsp A: [168791]
        automated match to d1i92a_
      2. 1786529Domain d2vspb_: 2vsp B: [168792]
        automated match to d1i92a_
      3. 1786530Domain d2vspc_: 2vsp C: [168793]
        automated match to d1i92a_
      4. 1786531Domain d2vspd_: 2vsp D: [168794]
        automated match to d1i92a_
    44. Domains for 2vsv:
      1. 1786489Domain d2vsva_: 2vsv A: [206441]
        automated match to d3qe1a_
      2. 1786490Domain d2vsvb_: 2vsv B: [231343]
        automated match to d2vsva_
    45. Domain for 2vwr:
    46. Domain for 2vz5:
    47. Domains for 2w7r:
      1. 1786463Domain d2w7ra_: 2w7r A: [206692]
        automated match to d2v90a_
        complexed with po4
      2. 1786464Domain d2w7rb_: 2w7r B: [206693]
        automated match to d2v90a_
        complexed with po4
    48. Domain for 2yuy:
    49. Domain for 2z17:
    50. Domains for 3b76:
      1. 1786479Domain d3b76a_: 3b76 A: [231833]
        automated match to d2vrfa_
        complexed with edo, na
      2. 1786480Domain d3b76b_: 3b76 B: [231834]
        automated match to d2vrfa_
        complexed with edo, na
    51. Domain for 3bpu:
    52. Domains for 3khf:
      1. 1786420Domain d3khfa_: 3khf A: [199616]
        automated match to d3khfb_
        complexed with cl, edo
      2. 1786421Domain d3khfb_: 3khf B: [196501]
        automated match to d3r68a_
        complexed with cl, edo
    53. Domain for 3o46:
    54. Domains for 3ps4:
      1. 1786491Domain d3ps4a_: 3ps4 A: [214937]
        automated match to d3khfb_
        complexed with edo, imd
      2. 1786492Domain d3ps4b_: 3ps4 B: [214938]
        automated match to d3khfb_
        complexed with edo, imd
      3. 1786493Domain d3ps4c_: 3ps4 C: [214939]
        automated match to d3khfb_
        complexed with edo, imd
      4. 1786494Domain d3ps4d_: 3ps4 D: [214940]
        automated match to d3khfb_
        complexed with edo, imd
    55. Domains for 3sfj:
      1. 1786425Domain d3sfja_: 3sfj A: [233532]
        automated match to d3dj3b_
      2. 1786426Domain d3sfjc_: 3sfj C: [233531]
        automated match to d3dj3b_
    56. Domains for 3shu:
      1. 1786534Domain d3shua_: 3shu A: [185405]
        automated match to d1tq3a1
      2. 1786535Domain d3shub_: 3shu B: [185406]
        automated match to d1tq3a1
    57. Domain for 3tsv:
    58. Domains for 4amh:
      1. 1786526Domain d4amha_: 4amh A: [219036]
        automated match to d3rl7b_
        complexed with gol, trs; mutant
      2. 1786527Domain d4amhb_: 4amh B: [219037]
        automated match to d3rl7b_
        complexed with gol, trs; mutant
    59. Domains for 4e34:
      1. 1786438Domain d4e34a_: 4e34 A: [201790]
        automated match to d4e34b_
        complexed with gol
      2. 1786439Domain d4e34b_: 4e34 B: [194193]
        automated match to d2vrfa_
        complexed with gol
    60. Domains for 4e35:
      1. 1786440Domain d4e35a_: 4e35 A: [220225]
        automated match to d4e34b_
        complexed with gol
      2. 1786441Domain d4e35b_: 4e35 B: [220226]
        automated match to d4e34b_
        complexed with gol
    61. Domains for 4e3b:
      1. 1786450Domain d4e3ba_: 4e3b A: [234354]
        automated match to d3dj3b_
      2. 1786451Domain d4e3bb_: 4e3b B: [234355]
        automated match to d3dj3b_
    62. Domains for 4joe:
      1. 1786427Domain d4joea_: 4joe A: [236160]
        automated match to d4e34b_
        complexed with gol
      2. 1786428Domain d4joeb_: 4joe B: [236161]
        automated match to d4e34b_
        complexed with gol
    63. Domains for 4jof:
      1. 1786436Domain d4jofa_: 4jof A: [236168]
        automated match to d4e34b_
        complexed with gol
      2. 1786437Domain d4jofb_: 4jof B: [236169]
        automated match to d4e34b_
        complexed with gol
    64. Domains for 4jog:
      1. 1786467Domain d4joga_: 4jog A: [236164]
        automated match to d4e34b_
        complexed with gol
      2. 1786468Domain d4jogb_: 4jog B: [236165]
        automated match to d4e34b_
        complexed with gol
    65. Domains for 4joh:
      1. 1786465Domain d4joha_: 4joh A: [236167]
        automated match to d4e34b_
        complexed with gol
      2. 1786466Domain d4johb_: 4joh B: [236166]
        automated match to d4e34b_
        complexed with gol
    66. Domains for 4joj:
      1. 1786433Domain d4joja_: 4joj A: [236163]
        automated match to d4e34b_
        complexed with gol
      2. 1786434Domain d4jojb_: 4joj B: [236162]
        automated match to d4e34b_
        complexed with gol
    67. Domains for 4jok:
      1. 1786422Domain d4joka_: 4jok A: [236158]
        automated match to d4e34b_
        complexed with gol
      2. 1786423Domain d4jokb_: 4jok B: [236159]
        automated match to d4e34b_
        complexed with gol
    68. Domains for 4k6y:
      1. 1786470Domain d4k6ya_: 4k6y A: [236170]
        automated match to d4e34b_
        complexed with gol
      2. 1786471Domain d4k6yb_: 4k6y B: [236171]
        automated match to d4e34b_
        complexed with gol
    69. Domains for 4k72:
      1. 1786510Domain d4k72a_: 4k72 A: [236173]
        automated match to d4e34b_
      2. 1786511Domain d4k72b_: 4k72 B: [236174]
        automated match to d4e34b_
    70. Domain for 4k75:
    71. Domains for 4k76:
      1. 1786495Domain d4k76a_: 4k76 A: [237172]
        automated match to d4e34b_
        complexed with gol
      2. 1786496Domain d4k76b_: 4k76 B: [237173]
        automated match to d4e34b_
        complexed with gol
      3. 1786497Domain d4k76c_: 4k76 C: [237174]
        automated match to d4e34b_
        complexed with gol
      4. 1786498Domain d4k76d_: 4k76 D: [237175]
        automated match to d4e34b_
        complexed with gol
    72. Domain for 4k78:
    73. Domains for 4nmo:
      1. 1786460Domain d4nmoa_: 4nmo A: [266955]
        automated match to d4joka_
        complexed with gol
      2. 1786461Domain d4nmob_: 4nmo B: [266956]
        automated match to d4joka_
        complexed with gol
    74. Domains for 4nmp:
      1. 1786442Domain d4nmpa_: 4nmp A: [266957]
        automated match to d4joka_
        complexed with gol
      2. 1786443Domain d4nmpb_: 4nmp B: [266958]
        automated match to d4joka_
        complexed with gol
    75. Domains for 4nmq:
      1. 1786456Domain d4nmqa_: 4nmq A: [266959]
        automated match to d4joka_
        complexed with gol
      2. 1786457Domain d4nmqb_: 4nmq B: [266960]
        automated match to d4joka_
        complexed with gol
    76. Domains for 4nmt:
      1. 1786454Domain d4nmta_: 4nmt A: [259836]
        automated match to d4joka_
        complexed with gol
      2. 1786455Domain d4nmtb_: 4nmt B: [263170]
        automated match to d4joka_
        complexed with gol
    77. Domains for 4nmv:
      1. 1786458Domain d4nmva_: 4nmv A: [266961]
        automated match to d4joka_
        complexed with gol
      2. 1786459Domain d4nmvb_: 4nmv B: [266962]
        automated match to d4joka_
        complexed with gol
    78. Domains for 4nnl:
      1. 1786472Domain d4nnla_: 4nnl A: [268386]
        automated match to d3sfjc_
      2. 1786473Domain d4nnlb_: 4nnl B: [268385]
        automated match to d3sfjc_
    79. Domains for 4nnm:
      1. 1786486Domain d4nnma_: 4nnm A: [268387]
        automated match to d3dj1a_
        complexed with gol
      2. 1786487Domain d4nnmb_: 4nnm B: [268394]
        automated match to d3dj1a_
        complexed with gol
    80. Domains for 4q2n:
      1. 1786514Domain d4q2na_: 4q2n A: [259465]
        automated match to d3cbxa_
        complexed with edo
      2. 1786515Domain d4q2nb_: 4q2n B: [263607]
        automated match to d4q2na_
        complexed with edo
      3. 1786516Domain d4q2nc_: 4q2n C: [263608]
        automated match to d4q2na_
        complexed with edo
      4. 1786517Domain d4q2nd_: 4q2n D: [263609]
        automated match to d4q2na_
        complexed with edo
      5. 1786518Domain d4q2ne_: 4q2n E: [261253]
        automated match to d3cbxa_
        complexed with edo
      6. 1786519Domain d4q2nf_: 4q2n F: [261252]
        automated match to d3cbxa_
        complexed with edo
    81. Domains for 4q2p:
      1. 1786520Domain d4q2pa_: 4q2p A: [259474]
        automated match to d2edza_
        complexed with edo, trs
      2. 1786521Domain d4q2pb_: 4q2p B: [259475]
        automated match to d2edza_
        complexed with edo, trs
      3. 1786522Domain d4q2pc_: 4q2p C: [261255]
        automated match to d2edza_
        complexed with edo, trs
    82. Domain for 4q2q:
    83. Domain for 4uu5:
    84. Domain for 4uu6:
  3. 1786563Legionella fallonii [TaxId:96230] [256025] (1 PDB entry)
  4. 1786565Legionella pneumophila [TaxId:446] [274374] (1 PDB entry)
  5. 1786567Mouse (Mus musculus) [TaxId:10090] [189959] (13 PDB entries)
    1. Domain for 2d90:
    2. Domain for 2edz:
    3. Domain for 2koh:
    4. Domain for 2koj:
    5. Domain for 2yub:
    6. Domains for 3dj1:
      1. 1786576Domain d3dj1a_: 3dj1 A: [239212]
        automated match to d3dj1b_
        complexed with so4
      2. 1786577Domain d3dj1b_: 3dj1 B: [231998]
        automated match to d3dj3b_
        complexed with so4
    7. Domains for 3dj3:
      1. 1786580Domain d3dj3a_: 3dj3 A: [209176]
        automated match to d2egna_
      2. 1786581Domain d3dj3b_: 3dj3 B: [209177]
        automated match to d2egna_
      3. 1786582Domain d3dj3c_: 3dj3 C: [209178]
        automated match to d2egna_
      4. 1786583Domain d3dj3d_: 3dj3 D: [209179]
        automated match to d2egna_
    8. Domains for 3ngh:
      1. 1786574Domain d3ngha_: 3ngh A: [182262]
        automated match to d1g9oa_
      2. 1786575Domain d3nghb_: 3ngh B: [182263]
        automated match to d1g9oa_
    9. Domain for 3r68:
    10. Domains for 3r69:
      1. 1786570Domain d3r69a_: 3r69 A: [184815]
        automated match to d1gq5a_
        complexed with cit
      2. 1786571Domain d3r69b_: 3r69 B: [184816]
        automated match to d1gq5a_
        complexed with cit
    11. Domain for 3vqf:
    12. Domains for 4f8k:
      1. 1786572Domain d4f8ka_: 4f8k A: [196634]
        automated match to d3ngha_
      2. 1786573Domain d4f8kb_: 4f8k B: [196635]
        automated match to d3ngha_
    13. Domains for 4r2z:
      1. 1786578Domain d4r2za_: 4r2z A: [276157]
        automated match to d4q3ha_
        complexed with gol, pg0
      2. 1786579Domain d4r2zb_: 4r2z B: [276235]
        automated match to d4q3ha_
        complexed with gol, pg0
  6. 1786589Norway rat (Rattus norvegicus) [TaxId:10116] [187666] (10 PDB entries)
    1. Domains for 2egk:
      1. 1786596Domain d2egka_: 2egk A: [164009]
        automated match to d1gq5a_
        complexed with po4
      2. 1786597Domain d2egkb_: 2egk B: [164010]
        automated match to d1gq5a_
        complexed with po4
      3. 1786598Domain d2egkc_: 2egk C: [164011]
        automated match to d1gq5a_
        complexed with po4
      4. 1786599Domain d2egkd_: 2egk D: [164012]
        automated match to d1gq5a_
        complexed with po4
    2. Domain for 2egn:
    3. Domains for 2ego:
      1. 1786592Domain d2egoa_: 2ego A: [204120]
        automated match to d2egna_
      2. 1786593Domain d2egob_: 2ego B: [204121]
        automated match to d2egna_
    4. Domain for 2g5m:
    5. Domain for 2k1z:
    6. Domain for 2k20:
    7. Domain for 2ogp:
    8. Domain for 3qdo:
    9. Domain for 3qe1:
    10. Domain for 4p2a:

More info for Protein automated matches from b.36.1.0: automated matches

Timeline for Protein automated matches from b.36.1.0: automated matches: