Lineage for Protein: Methane monooxygenase hydrolase beta subunit

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990025Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 protein domains)
  6. 1990110Protein Methane monooxygenase hydrolase beta subunit [88792] (2 species)

Species:

  1. 1990111Methylococcus capsulatus [TaxId:414] [88793] (27 PDB entries)
    1. Domains for 1fyz:
      1. 1990132Domain d1fyzc_: 1fyz C: [16762]
        Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyze_, d1fyzf_
        complexed with ca, fe2
      2. 1990133Domain d1fyzd_: 1fyz D: [16763]
        Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyze_, d1fyzf_
        complexed with ca, fe2
    2. Domains for 1fz0:
      1. 1990130Domain d1fz0c_: 1fz0 C: [16758]
        Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0e_, d1fz0f_
        complexed with ca, fe2
      2. 1990131Domain d1fz0d_: 1fz0 D: [16759]
        Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0e_, d1fz0f_
        complexed with ca, fe2
    3. Domains for 1fz1:
      1. 1990118Domain d1fz1c_: 1fz1 C: [16746]
        Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1e_, d1fz1f_
        complexed with ca, fe, fmt
      2. 1990119Domain d1fz1d_: 1fz1 D: [16747]
        Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1e_, d1fz1f_
        complexed with ca, fe, fmt
    4. Domains for 1fz2:
      1. 1990134Domain d1fz2c_: 1fz2 C: [16766]
        Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2e_, d1fz2f_
        complexed with ca, fe2
      2. 1990135Domain d1fz2d_: 1fz2 D: [16767]
        Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2e_, d1fz2f_
        complexed with ca, fe2
    5. Domains for 1fz3:
      1. 1990122Domain d1fz3c_: 1fz3 C: [16750]
        Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3e_, d1fz3f_
        complexed with ca, fe, fmt
      2. 1990123Domain d1fz3d_: 1fz3 D: [16751]
        Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3e_, d1fz3f_
        complexed with ca, fe, fmt
    6. Domains for 1fz4:
      1. 1990158Domain d1fz4c_: 1fz4 C: [16774]
        Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4e_, d1fz4f_
        complexed with ca, fe, fmt
      2. 1990159Domain d1fz4d_: 1fz4 D: [16775]
        Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4e_, d1fz4f_
        complexed with ca, fe, fmt
    7. Domains for 1fz5:
      1. 1990156Domain d1fz5c_: 1fz5 C: [16778]
        Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5e_, d1fz5f_
        complexed with ca, fe2
      2. 1990157Domain d1fz5d_: 1fz5 D: [16779]
        Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5e_, d1fz5f_
        complexed with ca, fe2
    8. Domains for 1fz6:
      1. 1990138Domain d1fz6c_: 1fz6 C: [60118]
        Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6e_, d1fz6f_
        complexed with ca, fe, moh
      2. 1990139Domain d1fz6d_: 1fz6 D: [60119]
        Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6e_, d1fz6f_
        complexed with ca, fe, moh
    9. Domains for 1fz7:
      1. 1990126Domain d1fz7c_: 1fz7 C: [16754]
        Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7e_, d1fz7f_
        complexed with ca, eoh, fe, fmt
      2. 1990127Domain d1fz7d_: 1fz7 D: [16755]
        Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7e_, d1fz7f_
        complexed with ca, eoh, fe, fmt
    10. Domains for 1fz8:
      1. 1990136Domain d1fz8c_: 1fz8 C: [60124]
        Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8e_, d1fz8f_
        complexed with 2bm, ca, fe
      2. 1990137Domain d1fz8d_: 1fz8 D: [60125]
        Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8e_, d1fz8f_
        complexed with 2bm, ca, fe
    11. Domains for 1fz9:
      1. 1990150Domain d1fz9c_: 1fz9 C: [60130]
        Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9e_, d1fz9f_
        complexed with ca, eti, fe
      2. 1990151Domain d1fz9d_: 1fz9 D: [60131]
        Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9e_, d1fz9f_
        complexed with ca, eti, fe
    12. Domains for 1fzh:
      1. 1990160Domain d1fzhc_: 1fzh C: [60136]
        Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhe_, d1fzhf_
        complexed with ca, fe, xe
      2. 1990161Domain d1fzhd_: 1fzh D: [60137]
        Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhe_, d1fzhf_
        complexed with ca, fe, xe
    13. Domains for 1fzi:
      1. 1990166Domain d1fzic_: 1fzi C: [60142]
        Other proteins in same PDB: d1fzia_, d1fzib_, d1fzie_, d1fzif_
        complexed with fe, xe
      2. 1990167Domain d1fzid_: 1fzi D: [60143]
        Other proteins in same PDB: d1fzia_, d1fzib_, d1fzie_, d1fzif_
        complexed with fe, xe
    14. Domains for 1mmo:
      1. 1990140Domain d1mmob_: 1mmo B: [16768]
        Other proteins in same PDB: d1mmod_, d1mmoe_, d1mmog_, d1mmoh_
        complexed with acy, fe
      2. 1990141Domain d1mmoc_: 1mmo C: [16769]
        Other proteins in same PDB: d1mmod_, d1mmoe_, d1mmog_, d1mmoh_
        complexed with acy, fe
    15. Domains for 1mty:
      1. 1990112Domain d1mtyb_: 1mty B: [16740]
        Other proteins in same PDB: d1mtyd_, d1mtye_, d1mtyg_, d1mtyh_
        complexed with fe
      2. 1990113Domain d1mtyc_: 1mty C: [16741]
        Other proteins in same PDB: d1mtyd_, d1mtye_, d1mtyg_, d1mtyh_
        complexed with fe
    16. Domains for 1xmf:
      1. 1990154Domain d1xmfc1: 1xmf C:2-389 [122149]
        Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfe_, d1xmff_
        complexed with ca, mn
      2. 1990155Domain d1xmfd_: 1xmf D: [122150]
        Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfe_, d1xmff_
        automated match to d1fyzc_
        complexed with ca, mn
    17. Domains for 1xmg:
      1. 1990142Domain d1xmgc_: 1xmg C: [122155]
        Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmge_, d1xmgf_
        automated match to d1fyzc_
        complexed with ca
      2. 1990143Domain d1xmgd_: 1xmg D: [122156]
        Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmge_, d1xmgf_
        automated match to d1fyzc_
        complexed with ca
    18. Domains for 1xmh:
      1. 1990146Domain d1xmhc_: 1xmh C: [122161]
        Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhe_, d1xmhf_
        automated match to d1fyzc_
        complexed with co
      2. 1990147Domain d1xmhd_: 1xmh D: [122162]
        Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhe_, d1xmhf_
        automated match to d1fyzc_
        complexed with co
    19. Domains for 1xu3:
      1. 1990148Domain d1xu3c_: 1xu3 C: [122322]
        Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3e_, d1xu3f_
        automated match to d1fyzc_
        complexed with bml, fe
      2. 1990149Domain d1xu3d_: 1xu3 D: [122323]
        Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3e_, d1xu3f_
        automated match to d1fyzc_
        complexed with bml, fe
    20. Domains for 1xu5:
      1. 1990120Domain d1xu5c_: 1xu5 C: [122328]
        Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5e_, d1xu5f_
        automated match to d1fyzc_
        complexed with fe, iph, oh
      2. 1990121Domain d1xu5d_: 1xu5 D: [122329]
        Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5e_, d1xu5f_
        automated match to d1fyzc_
        complexed with fe, iph, oh
    21. Domains for 1xvb:
      1. 1990114Domain d1xvbc_: 1xvb C: [122346]
        Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbe_, d1xvbf_
        automated match to d1fyzc_
        complexed with 3br, bbu, bbx, bhl, ca, fe
      2. 1990115Domain d1xvbd_: 1xvb D: [122347]
        Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbe_, d1xvbf_
        automated match to d1fyzc_
        complexed with 3br, bbu, bbx, bhl, ca, fe
    22. Domains for 1xvc:
      1. 1990128Domain d1xvcc_: 1xvc C: [122352]
        Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvce_, d1xvcf_
        automated match to d1fyzc_
        complexed with 5br, bmm, br, fe, fmt
      2. 1990129Domain d1xvcd_: 1xvc D: [122353]
        Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvce_, d1xvcf_
        automated match to d1fyzc_
        complexed with 5br, bmm, br, fe, fmt
    23. Domains for 1xvd:
      1. 1990144Domain d1xvdc_: 1xvd C: [122358]
        Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvde_, d1xvdf_
        automated match to d1fyzc_
        complexed with fe, fpn
      2. 1990145Domain d1xvdd_: 1xvd D: [122359]
        Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvde_, d1xvdf_
        automated match to d1fyzc_
        complexed with fe, fpn
    24. Domains for 1xve:
      1. 1990152Domain d1xvec_: 1xve C: [122364]
        Other proteins in same PDB: d1xvea_, d1xveb_, d1xvee_, d1xvef_
        automated match to d1fyzc_
        complexed with 3bb, ca, fe
      2. 1990153Domain d1xved_: 1xve D: [122365]
        Other proteins in same PDB: d1xvea_, d1xveb_, d1xvee_, d1xvef_
        automated match to d1fyzc_
        complexed with 3bb, ca, fe
    25. Domains for 1xvf:
      1. 1990124Domain d1xvfc_: 1xvf C: [122370]
        Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfe_, d1xvff_
        automated match to d1fyzc_
        complexed with 3cl, fe
      2. 1990125Domain d1xvfd_: 1xvf D: [122371]
        Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfe_, d1xvff_
        automated match to d1fyzc_
        complexed with 3cl, fe
    26. Domains for 1xvg:
      1. 1990116Domain d1xvgc_: 1xvg C: [122376]
        Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvge_, d1xvgf_
        automated match to d1fyzc_
        complexed with brj, ca, fe
      2. 1990117Domain d1xvgd_: 1xvg D: [122377]
        Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvge_, d1xvgf_
        automated match to d1fyzc_
        complexed with brj, ca, fe
    27. Domains for 4gam:
      1. 1990162Domain d4gamb_: 4gam B: [202223]
        Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
        automated match to d1fz1c_
        complexed with fe
      2. 1990163Domain d4gamg_: 4gam G: [202227]
        Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
        automated match to d1fz1c_
        complexed with fe
      3. 1990164Domain d4gaml_: 4gam L: [202231]
        Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
        automated match to d1fz1c_
        complexed with fe
      4. 1990165Domain d4gamq_: 4gam Q: [194032]
        Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
        automated match to d1xmgc_
        complexed with fe
  2. 1990168Methylosinus trichosporium [TaxId:426] [88794] (2 PDB entries)
    1. Domain for 1mhy:
    2. Domain for 1mhz:

More info for Protein Methane monooxygenase hydrolase beta subunit from a.25.1.2: Ribonucleotide reductase-like

Timeline for Protein Methane monooxygenase hydrolase beta subunit from a.25.1.2: Ribonucleotide reductase-like:

  • Protein Methane monooxygenase hydrolase beta subunit from a.25.1.2: Ribonucleotide reductase-like first appeared in SCOP 1.65
  • Protein Methane monooxygenase hydrolase beta subunit from a.25.1.2: Ribonucleotide reductase-like appears in SCOPe 2.05