Lineage for Species: Methylococcus capsulatus [TaxId: 414]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990025Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 protein domains)
  6. 1990110Protein Methane monooxygenase hydrolase beta subunit [88792] (2 species)
  7. 1990111Species Methylococcus capsulatus [TaxId:414] [88793] (27 PDB entries)

PDB entries in Species: Methylococcus capsulatus [TaxId: 414]:

  1. Domain(s) for 1fyz:
    1. 1990132Domain d1fyzc_: 1fyz C: [16762]
      Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyze_, d1fyzf_
      complexed with ca, fe2
    2. 1990133Domain d1fyzd_: 1fyz D: [16763]
      Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyze_, d1fyzf_
      complexed with ca, fe2
  2. Domain(s) for 1fz0:
    1. 1990130Domain d1fz0c_: 1fz0 C: [16758]
      Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0e_, d1fz0f_
      complexed with ca, fe2
    2. 1990131Domain d1fz0d_: 1fz0 D: [16759]
      Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0e_, d1fz0f_
      complexed with ca, fe2
  3. Domain(s) for 1fz1:
    1. 1990118Domain d1fz1c_: 1fz1 C: [16746]
      Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1e_, d1fz1f_
      complexed with ca, fe, fmt
    2. 1990119Domain d1fz1d_: 1fz1 D: [16747]
      Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1e_, d1fz1f_
      complexed with ca, fe, fmt
  4. Domain(s) for 1fz2:
    1. 1990134Domain d1fz2c_: 1fz2 C: [16766]
      Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2e_, d1fz2f_
      complexed with ca, fe2
    2. 1990135Domain d1fz2d_: 1fz2 D: [16767]
      Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2e_, d1fz2f_
      complexed with ca, fe2
  5. Domain(s) for 1fz3:
    1. 1990122Domain d1fz3c_: 1fz3 C: [16750]
      Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3e_, d1fz3f_
      complexed with ca, fe, fmt
    2. 1990123Domain d1fz3d_: 1fz3 D: [16751]
      Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3e_, d1fz3f_
      complexed with ca, fe, fmt
  6. Domain(s) for 1fz4:
    1. 1990158Domain d1fz4c_: 1fz4 C: [16774]
      Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4e_, d1fz4f_
      complexed with ca, fe, fmt
    2. 1990159Domain d1fz4d_: 1fz4 D: [16775]
      Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4e_, d1fz4f_
      complexed with ca, fe, fmt
  7. Domain(s) for 1fz5:
    1. 1990156Domain d1fz5c_: 1fz5 C: [16778]
      Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5e_, d1fz5f_
      complexed with ca, fe2
    2. 1990157Domain d1fz5d_: 1fz5 D: [16779]
      Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5e_, d1fz5f_
      complexed with ca, fe2
  8. Domain(s) for 1fz6:
    1. 1990138Domain d1fz6c_: 1fz6 C: [60118]
      Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6e_, d1fz6f_
      complexed with ca, fe, moh
    2. 1990139Domain d1fz6d_: 1fz6 D: [60119]
      Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6e_, d1fz6f_
      complexed with ca, fe, moh
  9. Domain(s) for 1fz7:
    1. 1990126Domain d1fz7c_: 1fz7 C: [16754]
      Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7e_, d1fz7f_
      complexed with ca, eoh, fe, fmt
    2. 1990127Domain d1fz7d_: 1fz7 D: [16755]
      Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7e_, d1fz7f_
      complexed with ca, eoh, fe, fmt
  10. Domain(s) for 1fz8:
    1. 1990136Domain d1fz8c_: 1fz8 C: [60124]
      Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8e_, d1fz8f_
      complexed with 2bm, ca, fe
    2. 1990137Domain d1fz8d_: 1fz8 D: [60125]
      Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8e_, d1fz8f_
      complexed with 2bm, ca, fe
  11. Domain(s) for 1fz9:
    1. 1990150Domain d1fz9c_: 1fz9 C: [60130]
      Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9e_, d1fz9f_
      complexed with ca, eti, fe
    2. 1990151Domain d1fz9d_: 1fz9 D: [60131]
      Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9e_, d1fz9f_
      complexed with ca, eti, fe
  12. Domain(s) for 1fzh:
    1. 1990160Domain d1fzhc_: 1fzh C: [60136]
      Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhe_, d1fzhf_
      complexed with ca, fe, xe
    2. 1990161Domain d1fzhd_: 1fzh D: [60137]
      Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhe_, d1fzhf_
      complexed with ca, fe, xe
  13. Domain(s) for 1fzi:
    1. 1990166Domain d1fzic_: 1fzi C: [60142]
      Other proteins in same PDB: d1fzia_, d1fzib_, d1fzie_, d1fzif_
      complexed with fe, xe
    2. 1990167Domain d1fzid_: 1fzi D: [60143]
      Other proteins in same PDB: d1fzia_, d1fzib_, d1fzie_, d1fzif_
      complexed with fe, xe
  14. Domain(s) for 1mmo:
    1. 1990140Domain d1mmob_: 1mmo B: [16768]
      Other proteins in same PDB: d1mmod_, d1mmoe_, d1mmog_, d1mmoh_
      complexed with acy, fe
    2. 1990141Domain d1mmoc_: 1mmo C: [16769]
      Other proteins in same PDB: d1mmod_, d1mmoe_, d1mmog_, d1mmoh_
      complexed with acy, fe
  15. Domain(s) for 1mty:
    1. 1990112Domain d1mtyb_: 1mty B: [16740]
      Other proteins in same PDB: d1mtyd_, d1mtye_, d1mtyg_, d1mtyh_
      complexed with fe
    2. 1990113Domain d1mtyc_: 1mty C: [16741]
      Other proteins in same PDB: d1mtyd_, d1mtye_, d1mtyg_, d1mtyh_
      complexed with fe
  16. Domain(s) for 1xmf:
    1. 1990154Domain d1xmfc1: 1xmf C:2-389 [122149]
      Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfe_, d1xmff_
      complexed with ca, mn
    2. 1990155Domain d1xmfd_: 1xmf D: [122150]
      Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfe_, d1xmff_
      automated match to d1fyzc_
      complexed with ca, mn
  17. Domain(s) for 1xmg:
    1. 1990142Domain d1xmgc_: 1xmg C: [122155]
      Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmge_, d1xmgf_
      automated match to d1fyzc_
      complexed with ca
    2. 1990143Domain d1xmgd_: 1xmg D: [122156]
      Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmge_, d1xmgf_
      automated match to d1fyzc_
      complexed with ca
  18. Domain(s) for 1xmh:
    1. 1990146Domain d1xmhc_: 1xmh C: [122161]
      Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhe_, d1xmhf_
      automated match to d1fyzc_
      complexed with co
    2. 1990147Domain d1xmhd_: 1xmh D: [122162]
      Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhe_, d1xmhf_
      automated match to d1fyzc_
      complexed with co
  19. Domain(s) for 1xu3:
    1. 1990148Domain d1xu3c_: 1xu3 C: [122322]
      Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3e_, d1xu3f_
      automated match to d1fyzc_
      complexed with bml, fe
    2. 1990149Domain d1xu3d_: 1xu3 D: [122323]
      Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3e_, d1xu3f_
      automated match to d1fyzc_
      complexed with bml, fe
  20. Domain(s) for 1xu5:
    1. 1990120Domain d1xu5c_: 1xu5 C: [122328]
      Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5e_, d1xu5f_
      automated match to d1fyzc_
      complexed with fe, iph, oh
    2. 1990121Domain d1xu5d_: 1xu5 D: [122329]
      Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5e_, d1xu5f_
      automated match to d1fyzc_
      complexed with fe, iph, oh
  21. Domain(s) for 1xvb:
    1. 1990114Domain d1xvbc_: 1xvb C: [122346]
      Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbe_, d1xvbf_
      automated match to d1fyzc_
      complexed with 3br, bbu, bbx, bhl, ca, fe
    2. 1990115Domain d1xvbd_: 1xvb D: [122347]
      Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbe_, d1xvbf_
      automated match to d1fyzc_
      complexed with 3br, bbu, bbx, bhl, ca, fe
  22. Domain(s) for 1xvc:
    1. 1990128Domain d1xvcc_: 1xvc C: [122352]
      Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvce_, d1xvcf_
      automated match to d1fyzc_
      complexed with 5br, bmm, br, fe, fmt
    2. 1990129Domain d1xvcd_: 1xvc D: [122353]
      Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvce_, d1xvcf_
      automated match to d1fyzc_
      complexed with 5br, bmm, br, fe, fmt
  23. Domain(s) for 1xvd:
    1. 1990144Domain d1xvdc_: 1xvd C: [122358]
      Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvde_, d1xvdf_
      automated match to d1fyzc_
      complexed with fe, fpn
    2. 1990145Domain d1xvdd_: 1xvd D: [122359]
      Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvde_, d1xvdf_
      automated match to d1fyzc_
      complexed with fe, fpn
  24. Domain(s) for 1xve:
    1. 1990152Domain d1xvec_: 1xve C: [122364]
      Other proteins in same PDB: d1xvea_, d1xveb_, d1xvee_, d1xvef_
      automated match to d1fyzc_
      complexed with 3bb, ca, fe
    2. 1990153Domain d1xved_: 1xve D: [122365]
      Other proteins in same PDB: d1xvea_, d1xveb_, d1xvee_, d1xvef_
      automated match to d1fyzc_
      complexed with 3bb, ca, fe
  25. Domain(s) for 1xvf:
    1. 1990124Domain d1xvfc_: 1xvf C: [122370]
      Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfe_, d1xvff_
      automated match to d1fyzc_
      complexed with 3cl, fe
    2. 1990125Domain d1xvfd_: 1xvf D: [122371]
      Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfe_, d1xvff_
      automated match to d1fyzc_
      complexed with 3cl, fe
  26. Domain(s) for 1xvg:
    1. 1990116Domain d1xvgc_: 1xvg C: [122376]
      Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvge_, d1xvgf_
      automated match to d1fyzc_
      complexed with brj, ca, fe
    2. 1990117Domain d1xvgd_: 1xvg D: [122377]
      Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvge_, d1xvgf_
      automated match to d1fyzc_
      complexed with brj, ca, fe
  27. Domain(s) for 4gam:
    1. 1990162Domain d4gamb_: 4gam B: [202223]
      Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
      automated match to d1fz1c_
      complexed with fe
    2. 1990163Domain d4gamg_: 4gam G: [202227]
      Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
      automated match to d1fz1c_
      complexed with fe
    3. 1990164Domain d4gaml_: 4gam L: [202231]
      Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
      automated match to d1fz1c_
      complexed with fe
    4. 1990165Domain d4gamq_: 4gam Q: [194032]
      Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
      automated match to d1xmgc_
      complexed with fe

More info for Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit

Timeline for Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit: