PDB entry 1xmh

View 1xmh on RCSB PDB site
Description: Structure of Co(II) reconstituted methane monooxygenase hydroxylase from M. capsulatus (Bath)
Class: oxidoreductase
Keywords: diiron; methane; dicobalt; four-helix bundle, OXIDOREDUCTASE
Deposited on 2004-10-02, released 2005-01-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.32 Å
R-factor: 0.194
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methane monooxygenase component A alpha chain
    Species: Methylococcus capsulatus [TaxId:243233]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xmha_
  • Chain 'B':
    Compound: Methane monooxygenase component A alpha chain
    Species: Methylococcus capsulatus [TaxId:243233]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xmhb_
  • Chain 'C':
    Compound: Methane monooxygenase component A beta chain
    Species: Methylococcus capsulatus [TaxId:243233]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P18798 (0-387)
      • conflict (16)
      • conflict (368)
    Domains in SCOPe 2.08: d1xmhc_
  • Chain 'D':
    Compound: Methane monooxygenase component A beta chain
    Species: Methylococcus capsulatus [TaxId:243233]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P18798 (0-387)
      • conflict (16)
      • conflict (368)
    Domains in SCOPe 2.08: d1xmhd_
  • Chain 'E':
    Compound: Methane monooxygenase component A gamma chain
    Species: Methylococcus capsulatus [TaxId:243233]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xmhe_
  • Chain 'F':
    Compound: Methane monooxygenase component A gamma chain
    Species: Methylococcus capsulatus [TaxId:243233]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xmhf_
  • Heterogens: CO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1xmhA (A:)
malstatkaatdalaanraptsvnaqevhrwlqsfnwdfknnrtkyatkykmanetkeqf
kliakeyarmeavkderqfgslqdaltrlnagvrvhpkwnetmkvvsnflevgeynaiaa
tgmlwdsaqaaeqkngylaqvldeirhthqcayvnyyfakngqdpaghndarrtrtigpl
wkgmkrvfsdgfisgdavecslnlqlvgeacftnplivavtewaaangdeitptvflsie
tdelrhmangyqtvvsiandpasakylntdlnnafwtqqkyftpvlgmlfeygskfkvep
wvktwdrwvyedwggiwigrlgkygvesprslkdakqdaywahhdlyllayalwptgffr
lalpdqeemewfeanypgwydhygkiyeewrargcedpssgfiplmwfiennhpiyidrv
sqvpfcpslakgastlrvheyngemhtfsdqwgermwlaeperyecqnifeqyegrelse
viaelhglrsdgktliaqphvrgdklwtlddikrlncvfknpvkafn

    Sequence, based on observed residues (ATOM records): (download) 
    >1xmhA (A:)
raptsvnaqevhrwlqsfnwdfknnrtkyatkykmanetkeqfkliakeyarmeavkder
qfgslqdaltrlnagvrvhpkwnetmkvvsnflevgeynaiaatgmlwdsaqaaeqkngy
laqvldeirhthqcayvnyyfakngqdpaghndarrtrtigplwkgmkrvfsdgfisgda
vecslnlqlvgeacftnplivavtewaaangdeitptvflsietdelrhmangyqtvvsi
andpasakylntdlnnafwtqqkyftpvlgmlfeygskfkvepwvktwdrwvyedwggiw
igrlgkygvesprslkdakqdaywahhdlyllayalwptgffrlalpdqeemewfeanyp
gwydhygkiyeewrargcedpssgfiplmwfiennhpiyidrvsqvpfcpslakgastlr
vheyngemhtfsdqwgermwlaeperyecqnifeqyegrelseviaelhglrsdgktlia
qphvrgdklwtlddikrlncvfknpvkafn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1xmhB (B:)
malstatkaatdalaanraptsvnaqevhrwlqsfnwdfknnrtkyatkykmanetkeqf
kliakeyarmeavkderqfgslqdaltrlnagvrvhpkwnetmkvvsnflevgeynaiaa
tgmlwdsaqaaeqkngylaqvldeirhthqcayvnyyfakngqdpaghndarrtrtigpl
wkgmkrvfsdgfisgdavecslnlqlvgeacftnplivavtewaaangdeitptvflsie
tdelrhmangyqtvvsiandpasakylntdlnnafwtqqkyftpvlgmlfeygskfkvep
wvktwdrwvyedwggiwigrlgkygvesprslkdakqdaywahhdlyllayalwptgffr
lalpdqeemewfeanypgwydhygkiyeewrargcedpssgfiplmwfiennhpiyidrv
sqvpfcpslakgastlrvheyngemhtfsdqwgermwlaeperyecqnifeqyegrelse
viaelhglrsdgktliaqphvrgdklwtlddikrlncvfknpvkafn

    Sequence, based on observed residues (ATOM records): (download) 
    >1xmhB (B:)
nraptsvnaqevhrwlqsfnwdfknnrtkyatkykmanetkeqfkliakeyarmeavkde
rqfgslqdaltrlnagvrvhpkwnetmkvvsnflevgeynaiaatgmlwdsaqaaeqkng
ylaqvldeirhthqcayvnyyfakngqdpaghndarrtrtigplwkgmkrvfsdgfisgd
avecslnlqlvgeacftnplivavtewaaangdeitptvflsietdelrhmangyqtvvs
iandpasakylntdlnnafwtqqkyftpvlgmlfeygskfkvepwvktwdrwvyedwggi
wigrlgkygvesprslkdakqdaywahhdlyllayalwptgffrlalpdqeemewfeany
pgwydhygkiyeewrargcedpssgfiplmwfiennhpiyidrvsqvpfcpslakgastl
rvheyngemhtfsdqwgermwlaeperyecqnifeqyegrelseviaelhglrsdgktli
aqphvrgdklwtlddikrlncvfknpvkafn

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1xmhC (C:)
smlgerrrgltdpemaevilkalpeapldgnnkmgyfvtprwkrlteyealtvyaqpnad
wiaggldwgdwtqkfhggrpswgnettelrtvdwfkhrdplrrwhapyvkdkaeewrytd
rflqgysadgqiramnptwrdefinrywgaflfneyglfnahsqgarealsdvtrvslaf
wgfdkidiaqmiqlergflakivpgfdestavpkaewtngevyksarlaveglwqevfdw
nesafsvhavydalfgqfvrreffqrlaprfgdnltpffinqaqtyfqiakqgvqdlyyn
clgddpefsdynrtvmrnwtgkwleptiaalrdfmglfaklpagttdkeeitaslyrvvd
dwiedyasridfkadrdqivkavlaglk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1xmhD (D:)
smlgerrrgltdpemaevilkalpeapldgnnkmgyfvtprwkrlteyealtvyaqpnad
wiaggldwgdwtqkfhggrpswgnettelrtvdwfkhrdplrrwhapyvkdkaeewrytd
rflqgysadgqiramnptwrdefinrywgaflfneyglfnahsqgarealsdvtrvslaf
wgfdkidiaqmiqlergflakivpgfdestavpkaewtngevyksarlaveglwqevfdw
nesafsvhavydalfgqfvrreffqrlaprfgdnltpffinqaqtyfqiakqgvqdlyyn
clgddpefsdynrtvmrnwtgkwleptiaalrdfmglfaklpagttdkeeitaslyrvvd
dwiedyasridfkadrdqivkavlaglk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1xmhE (E:)
aklgihsndtrdawvnkiaqlntlekaaemlkqfrmdhttpfrnsyeldndylwieakle
ekvavlkarafnevdfrhktafgedaksvldgtvakmnaakdkweaekihigfrqaykpp
impvnyfldgerqlgtrlmelrnlnyydtpleelrkqrgvrvvhlqsph

    Sequence, based on observed residues (ATOM records): (download) 
    >1xmhE (E:)
aklgihsndtrdawvnkiaqlntlekaaemlkqfrmdhttpfrnsyeldndylwieakle
ekvavlkarafnevdfrhktafgedaksvldgtvakmnaakdkweaekihigfrqaykpp
impvnyfldgerqlgtrlmelrnlnyydtpleelrkqrgvrvvhlqs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1xmhF (F:)
aklgihsndtrdawvnkiaqlntlekaaemlkqfrmdhttpfrnsyeldndylwieakle
ekvavlkarafnevdfrhktafgedaksvldgtvakmnaakdkweaekihigfrqaykpp
impvnyfldgerqlgtrlmelrnlnyydtpleelrkqrgvrvvhlqsph

    Sequence, based on observed residues (ATOM records): (download) 
    >1xmhF (F:)
lgihsndtrdawvnkiaqlntlekaaemlkqfrmdhttpfrnsyeldndylwieakleek
vavlkarafnevdfrhktafgedaksvldgtvakmnaakdkweaekihigfrqaykppim
pvnyfldgerqlgtrlmelrnlnyydtpleelrkqrgvrvvhlqsp