SCOPe 2.07: Protein: Tubulin beta-subunit

Lineage for Protein: Tubulin beta-subunit

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)
Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)
Protein Tubulin beta-subunit [55313] (2 species)

Species:

Cow (Bos taurus) [TaxId:9913] [64322] (7 PDB entries)
Uniprot P02554

Domain for 1jff:
- Domain d1jffb2: 1jff B:246-437 [62935]
  Other proteins in same PDB: d1jffa1, d1jffa2, d1jffb1
  complexed with gdp, gtp, mg, ta1, zn
Domains for 1sa0:
1. Domain d1sa0b2: 1sa0 B:246-438 [98772]
  Other proteins in same PDB: d1sa0a1, d1sa0a2, d1sa0b1, d1sa0c1, d1sa0c2, d1sa0d1, d1sa0e1, d1sa0e2
  complexed with cn2, gdp, gtp, mg
2. Domain d1sa0d2: 1sa0 D:246-438 [98776]
  Other proteins in same PDB: d1sa0a1, d1sa0a2, d1sa0b1, d1sa0c1, d1sa0c2, d1sa0d1, d1sa0e1, d1sa0e2
  complexed with cn2, gdp, gtp, mg
Domains for 1sa1:
1. Domain d1sa1b2: 1sa1 B:246-438 [98781]
  Other proteins in same PDB: d1sa1a1, d1sa1a2, d1sa1b1, d1sa1c1, d1sa1c2, d1sa1d1, d1sa1e_
  complexed with gdp, gtp, mg, pod
2. Domain d1sa1d2: 1sa1 D:246-437 [98785]
  Other proteins in same PDB: d1sa1a1, d1sa1a2, d1sa1b1, d1sa1c1, d1sa1c2, d1sa1d1, d1sa1e_
  complexed with gdp, gtp, mg, pod
Domain for 1tvk:
- Domain d1tvkb2: 1tvk B:246-427 [107365]
  Other proteins in same PDB: d1tvka1, d1tvka2, d1tvkb1
  complexed with ep, gdp, gtp

Domains for 1z2b:

Domain d1z2bb2: 1z2b B:246-438 [144728]
Other proteins in same PDB: d1z2ba1, d1z2ba2, d1z2bb1, d1z2bc1, d1z2bc2, d1z2bd1, d1z2be1, d1z2be2
complexed with cn2, gdp, gtp, mg, vlb

Domain d1z2bd2: 1z2b D:246-438 [144732]
Other proteins in same PDB: d1z2ba1, d1z2ba2, d1z2bb1, d1z2bc1, d1z2bc2, d1z2bd1, d1z2be1, d1z2be2
automatically matched to 1Z2B B:246-438
complexed with cn2, gdp, gtp, mg, vlb

Domains for 5fnv:

Domain d5fnvb2: 5fnv B:244-428 [317450]
Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb1, d5fnvc1, d5fnvc2, d5fnvd1, d5fnve_, d5fnvf1, d5fnvf2, d5fnvf3
automated match to d1sa0b2
complexed with acp, ca, gdp, gtp, mes, mg, x3h

Domain d5fnvd2: 5fnv D:244-430 [317453]
Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb1, d5fnvc1, d5fnvc2, d5fnvd1, d5fnve_, d5fnvf1, d5fnvf2, d5fnvf3
automated match to d1sa0b2
complexed with acp, ca, gdp, gtp, mes, mg, x3h

Domains for 6y4n:

Domain d6y4nb2: 6y4n B:244-431 [402801]
Other proteins in same PDB: d6y4na1, d6y4na2, d6y4nb1, d6y4nc1, d6y4nc2, d6y4nd1, d6y4ne_, d6y4nf1, d6y4nf2, d6y4nf3
automated match to d1sa0b2
complexed with acp, ca, gdp, gtp, mes, mg, o9b, o9k, o9n, p6s, peg, pge, val

Domain d6y4nd2: 6y4n D:244-431 [402815]
Other proteins in same PDB: d6y4na1, d6y4na2, d6y4nb1, d6y4nc1, d6y4nc2, d6y4nd1, d6y4ne_, d6y4nf1, d6y4nf2, d6y4nf3
automated match to d1sa0b2
complexed with acp, ca, gdp, gtp, mes, mg, o9b, o9k, o9n, p6s, peg, pge, val

Pig (Sus scrofa) [TaxId:9823] [55314] (8 PDB entries)

Domain for 1tub:
- Domain d1tubb2: 1tub B:246-437 [39804]
  Other proteins in same PDB: d1tuba1, d1tuba2, d1tubb1
  complexed with gdp, gtp, txl
Domain for 2hxf:
- Domain d2hxfb2: 2hxf B:247-437 [136841]
  Other proteins in same PDB: d2hxfa1, d2hxfa2, d2hxfb1, d2hxfc1
  automatically matched to d1sa0b2
  complexed with anp, gdp, gtp, mg, ta1
Domain for 2hxh:
- Domain d2hxhb2: 2hxh B:247-437 [136852]
  Other proteins in same PDB: d2hxha1, d2hxha2, d2hxhb1
  automatically matched to d1sa0b2
  complexed with adp, gdp, gtp, mg, ta1

Domains for 4zhq:

Domain d4zhqb2: 4zhq B:246-438 [320231]
Other proteins in same PDB: d4zhqa1, d4zhqa2, d4zhqb1, d4zhqc1, d4zhqc2, d4zhqd1, d4zhqe_, d4zhqf1, d4zhqf2, d4zhqf3
automated match to d1sa0b2
complexed with 4q5, acp, ca, gdp, gol, gtp, mes, mg

Domain d4zhqd2: 4zhq D:246-441 [320180]
Other proteins in same PDB: d4zhqa1, d4zhqa2, d4zhqb1, d4zhqc1, d4zhqc2, d4zhqd1, d4zhqe_, d4zhqf1, d4zhqf2, d4zhqf3
automated match to d1sa0b2
complexed with 4q5, acp, ca, gdp, gol, gtp, mes, mg

Domains for 4zi7:

Domain d4zi7b2: 4zi7 B:246-440 [320164]
Other proteins in same PDB: d4zi7a1, d4zi7a2, d4zi7b1, d4zi7c1, d4zi7c2, d4zi7d1, d4zi7e_, d4zi7f1, d4zi7f2, d4zi7f3
automated match to d1sa0b2
complexed with 4sl, acp, ca, gdp, gol, gtp, mes, mg

Domain d4zi7d2: 4zi7 D:246-441 [320169]
Other proteins in same PDB: d4zi7a1, d4zi7a2, d4zi7b1, d4zi7c1, d4zi7c2, d4zi7d1, d4zi7e_, d4zi7f1, d4zi7f2, d4zi7f3
automated match to d1sa0b2
complexed with 4sl, acp, ca, gdp, gol, gtp, mes, mg

Domains for 4zol:

Domain d4zolb2: 4zol B:246-440 [320196]
Other proteins in same PDB: d4zola1, d4zola2, d4zolb1, d4zolc1, d4zolc2, d4zold1, d4zole_, d4zolf1, d4zolf2, d4zolf3
automated match to d1sa0b2
complexed with 55q, acp, ca, gdp, gol, gtp, mes, mg

Domain d4zold2: 4zol D:246-441 [320223]
Other proteins in same PDB: d4zola1, d4zola2, d4zolb1, d4zolc1, d4zolc2, d4zold1, d4zole_, d4zolf1, d4zolf2, d4zolf3
automated match to d1sa0b2
complexed with 55q, acp, ca, gdp, gol, gtp, mes, mg

Domains for 5bmv:

Domain d5bmvb2: 5bmv B:246-438 [319661]
Other proteins in same PDB: d5bmva1, d5bmva2, d5bmvb1, d5bmvc1, d5bmvc2, d5bmvd1, d5bmve_, d5bmvf1, d5bmvf2, d5bmvf3
automated match to d1sa0b2
complexed with acp, ca, gdp, gol, gtp, mes, mg, vlb

Domain d5bmvd2: 5bmv D:246-441 [319508]
Other proteins in same PDB: d5bmva1, d5bmva2, d5bmvb1, d5bmvc1, d5bmvc2, d5bmvd1, d5bmve_, d5bmvf1, d5bmvf2, d5bmvf3
automated match to d1sa0b2
complexed with acp, ca, gdp, gol, gtp, mes, mg, vlb

Domains for 5jqg:

Domain d5jqgb2: 5jqg B:244-428 [317591]
Other proteins in same PDB: d5jqga1, d5jqga2, d5jqgb1, d5jqgc1, d5jqgc2, d5jqgd1, d5jqge_, d5jqgf1, d5jqgf2, d5jqgf3
automated match to d1sa0b2
complexed with acp, ca, cl, gdp, gtp, mes, mg

Domain d5jqgd2: 5jqg D:244-431 [317584]
Other proteins in same PDB: d5jqga1, d5jqga2, d5jqgb1, d5jqgc1, d5jqgc2, d5jqgd1, d5jqge_, d5jqgf1, d5jqgf2, d5jqgf3
automated match to d1sa0b2
complexed with acp, ca, cl, gdp, gtp, mes, mg

More info for Protein Tubulin beta-subunit from d.79.2.1: Tubulin, C-terminal domain

Timeline for Protein Tubulin beta-subunit from d.79.2.1: Tubulin, C-terminal domain:

Protein Tubulin beta-subunit from d.79.2.1: Tubulin, C-terminal domain first appeared (with stable ids) in SCOP 1.55
Protein Tubulin beta-subunit from d.79.2.1: Tubulin, C-terminal domain appears in SCOPe 2.06
Protein Tubulin beta-subunit from d.79.2.1: Tubulin, C-terminal domain appears in the current release, SCOPe 2.08