SCOPe 2.07: Domain d5fnvd2: 5fnv D:244-430

Lineage for d5fnvd2 (5fnv D:244-430)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)

6. Protein Tubulin beta-subunit [55313] (2 species)

7. Species Cow (Bos taurus) [TaxId:9913] [64322] (7 PDB entries)
   Uniprot P02554

8. Domain d5fnvd2: 5fnv D:244-430 [317453]
   Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb1, d5fnvc1, d5fnvc2, d5fnvd1, d5fnve_, d5fnvf1, d5fnvf2, d5fnvf3
   automated match to d1sa0b2
   complexed with acp, ca, gdp, gtp, mes, mg, x3h

Details for d5fnvd2

PDB Entry: 5fnv, 2.61 Å

PDB Description: a new complex structure of tubulin with an alpha-beta unsaturated lactone

PDB Compounds: (D:) Tubulin beta chain

SCOPe Domain Sequences for d5fnvd2:

Sequence, based on SEQRES records:

>d5fnvd2 d.79.2.1 (D:244-430) Tubulin beta-subunit {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmmaac
dprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqdata

Sequence, based on observed residues (ATOM records):

>d5fnvd2 d.79.2.1 (D:244-430) Tubulin beta-subunit {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfaplltvpeltqqmfdaknmmaacdprhgryltv
aavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsatfignsta
iqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyqdata

Timeline for d5fnvd2:

• d5fnvd2 first appeared in SCOPe 2.06
  
• d5fnvd2 appears in the current release, SCOPe 2.08