Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.218: Nucleotidyltransferase [81302] (1 superfamily) core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123 |
Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families) |
Family d.218.1.2: DNA polymerase beta-like [81300] (5 proteins) insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain |
Protein DNA polymerase lambda [102943] (1 species) |
Human (Homo sapiens) [TaxId:9606] [102944] (27 PDB entries) |
Domain d1rzta3: 1rzt A:386-575 [98226] Other proteins in same PDB: d1rzta1, d1rzta2, d1rzte1, d1rzte2, d1rzti1, d1rzti2, d1rztm1, d1rztm2 protein/DNA complex; complexed with edo, na |
Domain d1rzte3: 1rzt E:386-575 [98229] Other proteins in same PDB: d1rzta1, d1rzta2, d1rzte1, d1rzte2, d1rzti1, d1rzti2, d1rztm1, d1rztm2 protein/DNA complex; complexed with edo, na |
Domain d1rzti3: 1rzt I:386-575 [98232] Other proteins in same PDB: d1rzta1, d1rzta2, d1rzte1, d1rzte2, d1rzti1, d1rzti2, d1rztm1, d1rztm2 protein/DNA complex; complexed with edo, na |
Domain d1rztm3: 1rzt M:386-575 [98235] Other proteins in same PDB: d1rzta1, d1rzta2, d1rzte1, d1rzte2, d1rzti1, d1rzti2, d1rztm1, d1rztm2 protein/DNA complex; complexed with edo, na |
Domain d1xsla3: 1xsl A:386-575 [122272] Other proteins in same PDB: d1xsla1, d1xsla2, d1xsle1, d1xsle2, d1xsli1, d1xsli2, d1xslm1, d1xslm2 automatically matched to d1rzta3 protein/DNA complex; complexed with cac, mg, na |
Domain d1xsle3: 1xsl E:386-575 [122275] Other proteins in same PDB: d1xsla1, d1xsla2, d1xsle1, d1xsle2, d1xsli1, d1xsli2, d1xslm1, d1xslm2 automatically matched to d1rzta3 protein/DNA complex; complexed with cac, mg, na |
Domain d1xsli3: 1xsl I:386-575 [122278] Other proteins in same PDB: d1xsla1, d1xsla2, d1xsle1, d1xsle2, d1xsli1, d1xsli2, d1xslm1, d1xslm2 automatically matched to d1rzta3 protein/DNA complex; complexed with cac, mg, na |
Domain d1xslm3: 1xsl M:386-575 [122281] Other proteins in same PDB: d1xsla1, d1xsla2, d1xsle1, d1xsle2, d1xsli1, d1xsli2, d1xslm1, d1xslm2 automatically matched to d1rzta3 protein/DNA complex; complexed with cac, mg, na |
Domain d1xsna3: 1xsn A:386-575 [122284] Other proteins in same PDB: d1xsna1, d1xsna2 automatically matched to d1rzta3 protein/DNA complex; complexed with d3t, edo, mg, na |
Domain d1xspa3: 1xsp A:386-575 [122287] Other proteins in same PDB: d1xspa1, d1xspa2 automatically matched to d1rzta3 protein/DNA complex; complexed with na, ppv |
Domain d2bcqa3: 2bcq A:386-575 [128306] Other proteins in same PDB: d2bcqa1, d2bcqa2 automated match to d2bcqa3 protein/DNA complex; complexed with edo, mg, na, ppv |
Domain d2gwsa3: 2gws A:386-575 [135815] Other proteins in same PDB: d2gwsa1, d2gwsa2, d2gwse1, d2gwse2, d2gwsi1, d2gwsi2, d2gwsm1, d2gwsm2 automated match to d1rzta3 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2gwse3: 2gws E:386-575 [135818] Other proteins in same PDB: d2gwsa1, d2gwsa2, d2gwse1, d2gwse2, d2gwsi1, d2gwsi2, d2gwsm1, d2gwsm2 automated match to d1rzta3 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2gwsi3: 2gws I:386-575 [135821] Other proteins in same PDB: d2gwsa1, d2gwsa2, d2gwse1, d2gwse2, d2gwsi1, d2gwsi2, d2gwsm1, d2gwsm2 automated match to d1rzta3 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2gwsm3: 2gws M:386-575 [135824] Other proteins in same PDB: d2gwsa1, d2gwsa2, d2gwse1, d2gwse2, d2gwsi1, d2gwsi2, d2gwsm1, d2gwsm2 automated match to d1rzta3 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2pfna3: 2pfn A:386-575 [139674] Other proteins in same PDB: d2pfna1, d2pfna2 automated match to d1rzta3 protein/DNA complex; complexed with dup, mg, na |
Domain d2pfoa3: 2pfo A:386-575 [139677] Other proteins in same PDB: d2pfoa1, d2pfoa2 automated match to d1rzta3 protein/DNA complex; complexed with dup, edo, mg, mn, na |
Domain d2pfpa3: 2pfp A:386-575 [139680] Other proteins in same PDB: d2pfpa1, d2pfpa2 automated match to d1rzta3 protein/DNA complex; complexed with dcp, mg, na |
Domain d2pfqa3: 2pfq A:386-575 [139683] Other proteins in same PDB: d2pfqa1, d2pfqa2 automated match to d1rzta3 protein/DNA complex; complexed with dcp, mg, mn, na, ppv |
Domain d3c5fa3: 3c5f A:386-575 [155939] Other proteins in same PDB: d3c5fa1, d3c5fa2, d3c5fb1, d3c5fb2 automated match to d1rzta3 protein/DNA complex; complexed with na; mutant |
Domain d3c5fb3: 3c5f B:386-575 [155942] Other proteins in same PDB: d3c5fa1, d3c5fa2, d3c5fb1, d3c5fb2 automated match to d1rzta3 protein/DNA complex; complexed with na; mutant |
Domain d3c5ga3: 3c5g A:386-575 [155945] Other proteins in same PDB: d3c5ga1, d3c5ga2, d3c5gb1, d3c5gb2 automated match to d1rzta3 protein/DNA complex; complexed with d3t, edo, mg, na; mutant |
Domain d3c5gb3: 3c5g B:386-575 [155948] Other proteins in same PDB: d3c5ga1, d3c5ga2, d3c5gb1, d3c5gb2 automated match to d1rzta3 protein/DNA complex; complexed with d3t, edo, mg, na; mutant |
Domain d3hw8a3: 3hw8 A:386-575 [246600] Other proteins in same PDB: d3hw8a1, d3hw8a2 automated match to d1rzta3 protein/DNA complex; complexed with d3t, edo, mg, na |
Domain d3mdca3: 3mdc A:386-575 [247643] Other proteins in same PDB: d3mdca1, d3mdca2 automated match to d1rzta3 protein/DNA complex; complexed with gtf, mg, na |
Domain d3mgha3: 3mgh A:386-575 [247696] Other proteins in same PDB: d3mgha1, d3mgha2, d3mghc1, d3mghc2 automated match to d1rzta3 protein/DNA complex; complexed with na; mutant |
Domain d3mghc3: 3mgh C:386-575 [247699] Other proteins in same PDB: d3mgha1, d3mgha2, d3mghc1, d3mghc2 automated match to d1rzta3 protein/DNA complex; complexed with na; mutant |
Domain d3mgia3: 3mgi A:386-575 [247702] Other proteins in same PDB: d3mgia1, d3mgia2 automated match to d1rzta3 protein/DNA complex; complexed with d3t, mg, na; mutant |
Domain d3pmla3: 3pml A:386-575 [248523] Other proteins in same PDB: d3pmla1, d3pmla2, d3pmlb1, d3pmlb2 automated match to d1rzta3 protein/DNA complex; complexed with 1gc, mg, na |
Domain d3pmlb3: 3pml B:386-575 [248526] Other proteins in same PDB: d3pmla1, d3pmla2, d3pmlb1, d3pmlb2 automated match to d1rzta3 protein/DNA complex; complexed with 1gc, mg, na |
Domain d3pmna3: 3pmn A:386-575 [248529] Other proteins in same PDB: d3pmna1, d3pmna2 automated match to d1rzta3 protein/DNA complex; complexed with 1gc, cl, mg, mn, na |
Domain d3pnca3: 3pnc A:386-575 [248542] Other proteins in same PDB: d3pnca1, d3pnca2 automated match to d1rzta3 protein/DNA complex; complexed with 1gc, mg, na, trs |
Domain d3upqa3: 3upq A:386-575 [250250] Other proteins in same PDB: d3upqa1, d3upqa2 automated match to d1rzta3 protein/DNA complex; complexed with mn, na, so4, zan |
Domain d3uq0a3: 3uq0 A:386-575 [250254] Other proteins in same PDB: d3uq0a1, d3uq0a2 automated match to d1rzta3 protein/DNA complex; complexed with cl, edo, na, so4 |
Domain d3uq1a3: 3uq1 A:386-575 [306666] Other proteins in same PDB: d3uq1a1, d3uq1a2 automated match to d2bcqa3 protein/DNA complex; complexed with cl, f2a, mg, mn, na |
Domain d3uq2a3: 3uq2 A:386-575 [250257] Other proteins in same PDB: d3uq2a1, d3uq2a2 automated match to d1rzta3 protein/DNA complex; complexed with mg, na, ppv |
Domain d4fo6a3: 4fo6 A:386-575 [252042] Other proteins in same PDB: d4fo6a1, d4fo6a2 automated match to d1rzta3 protein/DNA complex; complexed with cl, f2a, mg, mn, na |
Domain d4k4ga3: 4k4g A:386-575 [257798] Other proteins in same PDB: d4k4ga1, d4k4ga2, d4k4ga4, d4k4ge1, d4k4ge2, d4k4ge4, d4k4gi1, d4k4gi2, d4k4gi4, d4k4gm1, d4k4gm2, d4k4gm4 automated match to d1rzta3 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4ge3: 4k4g E:386-575 [257796] Other proteins in same PDB: d4k4ga1, d4k4ga2, d4k4ga4, d4k4ge1, d4k4ge2, d4k4ge4, d4k4gi1, d4k4gi2, d4k4gi4, d4k4gm1, d4k4gm2, d4k4gm4 automated match to d1rzta3 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4gi3: 4k4g I:386-575 [262796] Other proteins in same PDB: d4k4ga1, d4k4ga2, d4k4ga4, d4k4ge1, d4k4ge2, d4k4ge4, d4k4gi1, d4k4gi2, d4k4gi4, d4k4gm1, d4k4gm2, d4k4gm4 automated match to d2bcqa3 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4gm3: 4k4g M:386-575 [262799] Other proteins in same PDB: d4k4ga1, d4k4ga2, d4k4ga4, d4k4ge1, d4k4ge2, d4k4ge4, d4k4gi1, d4k4gi2, d4k4gi4, d4k4gm1, d4k4gm2, d4k4gm4 automated match to d2bcqa3 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4ha3: 4k4h A:386-575 [262802] Other proteins in same PDB: d4k4ha1, d4k4ha2, d4k4ha4, d4k4he1, d4k4he2, d4k4he4, d4k4hi1, d4k4hi2, d4k4hi4, d4k4hm1, d4k4hm2, d4k4hm4 automated match to d2bcqa3 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4he3: 4k4h E:386-575 [258919] Other proteins in same PDB: d4k4ha1, d4k4ha2, d4k4ha4, d4k4he1, d4k4he2, d4k4he4, d4k4hi1, d4k4hi2, d4k4hi4, d4k4hm1, d4k4hm2, d4k4hm4 automated match to d1rzta3 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4hi3: 4k4h I:386-575 [262805] Other proteins in same PDB: d4k4ha1, d4k4ha2, d4k4ha4, d4k4he1, d4k4he2, d4k4he4, d4k4hi1, d4k4hi2, d4k4hi4, d4k4hm1, d4k4hm2, d4k4hm4 automated match to d2bcqa3 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4hm3: 4k4h M:386-575 [262808] Other proteins in same PDB: d4k4ha1, d4k4ha2, d4k4ha4, d4k4he1, d4k4he2, d4k4he4, d4k4hi1, d4k4hi2, d4k4hi4, d4k4hm1, d4k4hm2, d4k4hm4 automated match to d2bcqa3 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4ia3: 4k4i A:386-575 [266522] Other proteins in same PDB: d4k4ia1, d4k4ia2, d4k4ia4, d4k4ie1, d4k4ie2, d4k4ie4, d4k4ii1, d4k4ii2, d4k4ii4, d4k4im1, d4k4im2, d4k4im4 automated match to d2bcqa3 protein/DNA complex; complexed with 1ry, act, ca, cac |
Domain d4k4ie3: 4k4i E:386-575 [266525] Other proteins in same PDB: d4k4ia1, d4k4ia2, d4k4ia4, d4k4ie1, d4k4ie2, d4k4ie4, d4k4ii1, d4k4ii2, d4k4ii4, d4k4im1, d4k4im2, d4k4im4 automated match to d2bcqa3 protein/DNA complex; complexed with 1ry, act, ca, cac |
Domain d4k4ii3: 4k4i I:386-575 [266528] Other proteins in same PDB: d4k4ia1, d4k4ia2, d4k4ia4, d4k4ie1, d4k4ie2, d4k4ie4, d4k4ii1, d4k4ii2, d4k4ii4, d4k4im1, d4k4im2, d4k4im4 automated match to d2bcqa3 protein/DNA complex; complexed with 1ry, act, ca, cac |
Domain d4k4im3: 4k4i M:386-575 [266531] Other proteins in same PDB: d4k4ia1, d4k4ia2, d4k4ia4, d4k4ie1, d4k4ie2, d4k4ie4, d4k4ii1, d4k4ii2, d4k4ii4, d4k4im1, d4k4im2, d4k4im4 automated match to d2bcqa3 protein/DNA complex; complexed with 1ry, act, ca, cac |
Timeline for Protein DNA polymerase lambda from d.218.1.2: DNA polymerase beta-like: