Lineage for d2pfpa3 (2pfp A:386-575)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3006866Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 3006867Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families) (S)
  5. 3006901Family d.218.1.2: DNA polymerase beta-like [81300] (5 proteins)
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. 3007079Protein DNA polymerase lambda [102943] (1 species)
  7. 3007080Species Human (Homo sapiens) [TaxId:9606] [102944] (27 PDB entries)
  8. 3007102Domain d2pfpa3: 2pfp A:386-575 [139680]
    Other proteins in same PDB: d2pfpa1, d2pfpa2
    automated match to d1rzta3
    protein/DNA complex; complexed with dcp, mg, na

Details for d2pfpa3

PDB Entry: 2pfp (more details), 2.1 Å

PDB Description: dna polymerase lambda in complex with dna and dctp
PDB Compounds: (A:) DNA polymerase lambda

SCOPe Domain Sequences for d2pfpa3:

Sequence; same for both SEQRES and ATOM records: (download)

>d2pfpa3 d.218.1.2 (A:386-575) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
rmpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifs
rlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacally
ftgsahfnrsmralaktkgmslsehalstavvrnthgakvgpgrvlptptekdvfrllgl
pyrepaerdw

SCOPe Domain Coordinates for d2pfpa3:

Click to download the PDB-style file with coordinates for d2pfpa3.
(The format of our PDB-style files is described here.)

Timeline for d2pfpa3: