Lineage for d2gwsm2 (2gws M:329-385)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.60: SAM domain-like [47768] (17 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (3 proteins)
    topological similarity to the N-terminal domain
    automatically mapped to Pfam PF10391
  6. Protein DNA polymerase lambda [101253] (1 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [101254] (27 PDB entries)
  8. Domain d2gwsm2: 2gws M:329-385 [135823]
    Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
    automated match to d2pfna2
    protein/DNA complex; complexed with cac, cl, edo, mg, na

Details for d2gwsm2

PDB Entry: 2gws (more details), 2.4 Å

PDB Description: crystal structure of human dna polymerase lambda with a g/g mismatch in the primer terminus
PDB Compounds: (M:) DNA polymerase lambda

SCOPe Domain Sequences for d2gwsm2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2gwsm2 a.60.12.1 (M:329-385) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
sesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdfle

SCOPe Domain Coordinates for d2gwsm2 are not available.

Timeline for d2gwsm2:

View in 3D
Domains from same chain:
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d2gwsm1, d2gwsm3
View in 3D
Domains from other chains:
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d2gwsa1, d2gwsa2, d2gwsa3, d2gwse1, d2gwse2, d2gwse3, d2gwsi1, d2gwsi2, d2gwsi3