Lineage for Protein: Methane monooxygenase hydrolase alpha subunit

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990025Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 protein domains)
  6. 1990053Protein Methane monooxygenase hydrolase alpha subunit [88789] (2 species)

Species:

  1. 1990054Methylococcus capsulatus [TaxId:414] [88790] (26 PDB entries)
    1. Domains for 1fyz:
      1. 1990075Domain d1fyza_: 1fyz A: [16760]
        Other proteins in same PDB: d1fyzc_, d1fyzd_, d1fyze_, d1fyzf_
        complexed with ca, fe2
      2. 1990076Domain d1fyzb_: 1fyz B: [16761]
        Other proteins in same PDB: d1fyzc_, d1fyzd_, d1fyze_, d1fyzf_
        complexed with ca, fe2
    2. Domains for 1fz0:
      1. 1990073Domain d1fz0a_: 1fz0 A: [16756]
        Other proteins in same PDB: d1fz0c_, d1fz0d_, d1fz0e_, d1fz0f_
        complexed with ca, fe2
      2. 1990074Domain d1fz0b_: 1fz0 B: [16757]
        Other proteins in same PDB: d1fz0c_, d1fz0d_, d1fz0e_, d1fz0f_
        complexed with ca, fe2
    3. Domains for 1fz1:
      1. 1990061Domain d1fz1a_: 1fz1 A: [16744]
        Other proteins in same PDB: d1fz1c_, d1fz1d_, d1fz1e_, d1fz1f_
        complexed with ca, fe, fmt
      2. 1990062Domain d1fz1b_: 1fz1 B: [16745]
        Other proteins in same PDB: d1fz1c_, d1fz1d_, d1fz1e_, d1fz1f_
        complexed with ca, fe, fmt
    4. Domains for 1fz2:
      1. 1990077Domain d1fz2a_: 1fz2 A: [16764]
        Other proteins in same PDB: d1fz2c_, d1fz2d_, d1fz2e_, d1fz2f_
        complexed with ca, fe2
      2. 1990078Domain d1fz2b_: 1fz2 B: [16765]
        Other proteins in same PDB: d1fz2c_, d1fz2d_, d1fz2e_, d1fz2f_
        complexed with ca, fe2
    5. Domains for 1fz3:
      1. 1990065Domain d1fz3a_: 1fz3 A: [16748]
        Other proteins in same PDB: d1fz3c_, d1fz3d_, d1fz3e_, d1fz3f_
        complexed with ca, fe, fmt
      2. 1990066Domain d1fz3b_: 1fz3 B: [16749]
        Other proteins in same PDB: d1fz3c_, d1fz3d_, d1fz3e_, d1fz3f_
        complexed with ca, fe, fmt
    6. Domains for 1fz4:
      1. 1990101Domain d1fz4a_: 1fz4 A: [16772]
        Other proteins in same PDB: d1fz4c_, d1fz4d_, d1fz4e_, d1fz4f_
        complexed with ca, fe, fmt
      2. 1990102Domain d1fz4b_: 1fz4 B: [16773]
        Other proteins in same PDB: d1fz4c_, d1fz4d_, d1fz4e_, d1fz4f_
        complexed with ca, fe, fmt
    7. Domains for 1fz5:
      1. 1990099Domain d1fz5a_: 1fz5 A: [16776]
        Other proteins in same PDB: d1fz5c_, d1fz5d_, d1fz5e_, d1fz5f_
        complexed with ca, fe2
      2. 1990100Domain d1fz5b_: 1fz5 B: [16777]
        Other proteins in same PDB: d1fz5c_, d1fz5d_, d1fz5e_, d1fz5f_
        complexed with ca, fe2
    8. Domains for 1fz6:
      1. 1990081Domain d1fz6a_: 1fz6 A: [60116]
        Other proteins in same PDB: d1fz6c_, d1fz6d_, d1fz6e_, d1fz6f_
        complexed with ca, fe, moh
      2. 1990082Domain d1fz6b_: 1fz6 B: [60117]
        Other proteins in same PDB: d1fz6c_, d1fz6d_, d1fz6e_, d1fz6f_
        complexed with ca, fe, moh
    9. Domains for 1fz7:
      1. 1990069Domain d1fz7a_: 1fz7 A: [16752]
        Other proteins in same PDB: d1fz7c_, d1fz7d_, d1fz7e_, d1fz7f_
        complexed with ca, eoh, fe, fmt
      2. 1990070Domain d1fz7b_: 1fz7 B: [16753]
        Other proteins in same PDB: d1fz7c_, d1fz7d_, d1fz7e_, d1fz7f_
        complexed with ca, eoh, fe, fmt
    10. Domains for 1fz8:
      1. 1990079Domain d1fz8a_: 1fz8 A: [60122]
        Other proteins in same PDB: d1fz8c_, d1fz8d_, d1fz8e_, d1fz8f_
        complexed with 2bm, ca, fe
      2. 1990080Domain d1fz8b_: 1fz8 B: [60123]
        Other proteins in same PDB: d1fz8c_, d1fz8d_, d1fz8e_, d1fz8f_
        complexed with 2bm, ca, fe
    11. Domains for 1fz9:
      1. 1990093Domain d1fz9a_: 1fz9 A: [60128]
        Other proteins in same PDB: d1fz9c_, d1fz9d_, d1fz9e_, d1fz9f_
        complexed with ca, eti, fe
      2. 1990094Domain d1fz9b_: 1fz9 B: [60129]
        Other proteins in same PDB: d1fz9c_, d1fz9d_, d1fz9e_, d1fz9f_
        complexed with ca, eti, fe
    12. Domains for 1fzh:
      1. 1990103Domain d1fzha_: 1fzh A: [60134]
        Other proteins in same PDB: d1fzhc_, d1fzhd_, d1fzhe_, d1fzhf_
        complexed with ca, fe, xe
      2. 1990104Domain d1fzhb_: 1fzh B: [60135]
        Other proteins in same PDB: d1fzhc_, d1fzhd_, d1fzhe_, d1fzhf_
        complexed with ca, fe, xe
    13. Domains for 1fzi:
      1. 1990105Domain d1fzia_: 1fzi A: [60140]
        Other proteins in same PDB: d1fzic_, d1fzid_, d1fzie_, d1fzif_
        complexed with fe, xe
      2. 1990106Domain d1fzib_: 1fzi B: [60141]
        Other proteins in same PDB: d1fzic_, d1fzid_, d1fzie_, d1fzif_
        complexed with fe, xe
    14. Domains for 1mmo:
      1. 1990083Domain d1mmod_: 1mmo D: [16770]
        Other proteins in same PDB: d1mmob_, d1mmoc_, d1mmog_, d1mmoh_
        complexed with acy, fe
      2. 1990084Domain d1mmoe_: 1mmo E: [16771]
        Other proteins in same PDB: d1mmob_, d1mmoc_, d1mmog_, d1mmoh_
        complexed with acy, fe
    15. Domains for 1mty:
      1. 1990055Domain d1mtyd_: 1mty D: [16742]
        Other proteins in same PDB: d1mtyb_, d1mtyc_, d1mtyg_, d1mtyh_
        complexed with fe
      2. 1990056Domain d1mtye_: 1mty E: [16743]
        Other proteins in same PDB: d1mtyb_, d1mtyc_, d1mtyg_, d1mtyh_
        complexed with fe
    16. Domains for 1xmf:
      1. 1990097Domain d1xmfa_: 1xmf A: [122147]
        Other proteins in same PDB: d1xmfc1, d1xmfd_, d1xmfe_, d1xmff_
        automated match to d1fz1a_
        complexed with ca, mn
      2. 1990098Domain d1xmfb_: 1xmf B: [122148]
        Other proteins in same PDB: d1xmfc1, d1xmfd_, d1xmfe_, d1xmff_
        automated match to d1fz1a_
        complexed with ca, mn
    17. Domains for 1xmg:
      1. 1990085Domain d1xmga_: 1xmg A: [122153]
        Other proteins in same PDB: d1xmgc_, d1xmgd_, d1xmge_, d1xmgf_
        automated match to d1fz1a_
        complexed with ca
      2. 1990086Domain d1xmgb_: 1xmg B: [122154]
        Other proteins in same PDB: d1xmgc_, d1xmgd_, d1xmge_, d1xmgf_
        automated match to d1fz1a_
        complexed with ca
    18. Domains for 1xmh:
      1. 1990089Domain d1xmha_: 1xmh A: [122159]
        Other proteins in same PDB: d1xmhc_, d1xmhd_, d1xmhe_, d1xmhf_
        automated match to d1fz1a_
        complexed with co
      2. 1990090Domain d1xmhb_: 1xmh B: [122160]
        Other proteins in same PDB: d1xmhc_, d1xmhd_, d1xmhe_, d1xmhf_
        automated match to d1fz1a_
        complexed with co
    19. Domains for 1xu3:
      1. 1990091Domain d1xu3a_: 1xu3 A: [122320]
        Other proteins in same PDB: d1xu3c_, d1xu3d_, d1xu3e_, d1xu3f_
        automated match to d1fz1a_
        complexed with bml, fe
      2. 1990092Domain d1xu3b_: 1xu3 B: [122321]
        Other proteins in same PDB: d1xu3c_, d1xu3d_, d1xu3e_, d1xu3f_
        automated match to d1fz1a_
        complexed with bml, fe
    20. Domains for 1xu5:
      1. 1990063Domain d1xu5a_: 1xu5 A: [122326]
        Other proteins in same PDB: d1xu5c_, d1xu5d_, d1xu5e_, d1xu5f_
        automated match to d1fz1a_
        complexed with fe, iph, oh
      2. 1990064Domain d1xu5b_: 1xu5 B: [122327]
        Other proteins in same PDB: d1xu5c_, d1xu5d_, d1xu5e_, d1xu5f_
        automated match to d1fz1a_
        complexed with fe, iph, oh
    21. Domains for 1xvb:
      1. 1990057Domain d1xvba_: 1xvb A: [122344]
        Other proteins in same PDB: d1xvbc_, d1xvbd_, d1xvbe_, d1xvbf_
        automated match to d1fz1a_
        complexed with 3br, bbu, bbx, bhl, ca, fe
      2. 1990058Domain d1xvbb_: 1xvb B: [122345]
        Other proteins in same PDB: d1xvbc_, d1xvbd_, d1xvbe_, d1xvbf_
        automated match to d1fz1a_
        complexed with 3br, bbu, bbx, bhl, ca, fe
    22. Domains for 1xvc:
      1. 1990071Domain d1xvca_: 1xvc A: [122350]
        Other proteins in same PDB: d1xvcc_, d1xvcd_, d1xvce_, d1xvcf_
        automated match to d1fz1a_
        complexed with 5br, bmm, br, fe, fmt
      2. 1990072Domain d1xvcb_: 1xvc B: [122351]
        Other proteins in same PDB: d1xvcc_, d1xvcd_, d1xvce_, d1xvcf_
        automated match to d1fz1a_
        complexed with 5br, bmm, br, fe, fmt
    23. Domains for 1xvd:
      1. 1990087Domain d1xvda_: 1xvd A: [122356]
        Other proteins in same PDB: d1xvdc_, d1xvdd_, d1xvde_, d1xvdf_
        automated match to d1fz1a_
        complexed with fe, fpn
      2. 1990088Domain d1xvdb_: 1xvd B: [122357]
        Other proteins in same PDB: d1xvdc_, d1xvdd_, d1xvde_, d1xvdf_
        automated match to d1fz1a_
        complexed with fe, fpn
    24. Domains for 1xve:
      1. 1990095Domain d1xvea_: 1xve A: [122362]
        Other proteins in same PDB: d1xvec_, d1xved_, d1xvee_, d1xvef_
        automated match to d1fz1a_
        complexed with 3bb, ca, fe
      2. 1990096Domain d1xveb_: 1xve B: [122363]
        Other proteins in same PDB: d1xvec_, d1xved_, d1xvee_, d1xvef_
        automated match to d1fz1a_
        complexed with 3bb, ca, fe
    25. Domains for 1xvf:
      1. 1990067Domain d1xvfa_: 1xvf A: [122368]
        Other proteins in same PDB: d1xvfc_, d1xvfd_, d1xvfe_, d1xvff_
        automated match to d1fz1a_
        complexed with 3cl, fe
      2. 1990068Domain d1xvfb_: 1xvf B: [122369]
        Other proteins in same PDB: d1xvfc_, d1xvfd_, d1xvfe_, d1xvff_
        automated match to d1fz1a_
        complexed with 3cl, fe
    26. Domains for 1xvg:
      1. 1990059Domain d1xvga_: 1xvg A: [122374]
        Other proteins in same PDB: d1xvgc_, d1xvgd_, d1xvge_, d1xvgf_
        automated match to d1fz1a_
        complexed with brj, ca, fe
      2. 1990060Domain d1xvgb_: 1xvg B: [122375]
        Other proteins in same PDB: d1xvgc_, d1xvgd_, d1xvge_, d1xvgf_
        automated match to d1fz1a_
        complexed with brj, ca, fe
  2. 1990107Methylosinus trichosporium [TaxId:426] [88791] (2 PDB entries)
    1. Domain for 1mhy:
    2. Domain for 1mhz:

More info for Protein Methane monooxygenase hydrolase alpha subunit from a.25.1.2: Ribonucleotide reductase-like

Timeline for Protein Methane monooxygenase hydrolase alpha subunit from a.25.1.2: Ribonucleotide reductase-like:

  • Protein Methane monooxygenase hydrolase alpha subunit from a.25.1.2: Ribonucleotide reductase-like first appeared in SCOP 1.65
  • Protein Methane monooxygenase hydrolase alpha subunit from a.25.1.2: Ribonucleotide reductase-like appears in SCOPe 2.05