Lineage for Species: Methylococcus capsulatus [TaxId: 414]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2700837Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 2700838Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 2703310Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 proteins)
  6. 2703338Protein Methane monooxygenase hydrolase alpha subunit [88789] (2 species)
  7. 2703339Species Methylococcus capsulatus [TaxId:414] [88790] (26 PDB entries)

PDB entries in Species: Methylococcus capsulatus [TaxId: 414]:

  1. Domain(s) for 1fyz:
    1. 2703360Domain d1fyza_: 1fyz A: [16760]
      Other proteins in same PDB: d1fyzc_, d1fyzd_, d1fyze_, d1fyzf_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
    2. 2703361Domain d1fyzb_: 1fyz B: [16761]
      Other proteins in same PDB: d1fyzc_, d1fyzd_, d1fyze_, d1fyzf_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1fz0:
    1. 2703358Domain d1fz0a_: 1fz0 A: [16756]
      Other proteins in same PDB: d1fz0c_, d1fz0d_, d1fz0e_, d1fz0f_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
    2. 2703359Domain d1fz0b_: 1fz0 B: [16757]
      Other proteins in same PDB: d1fz0c_, d1fz0d_, d1fz0e_, d1fz0f_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 1fz1:
    1. 2703346Domain d1fz1a_: 1fz1 A: [16744]
      Other proteins in same PDB: d1fz1c_, d1fz1d_, d1fz1e_, d1fz1f_
      complexed with ca, fe, fmt
      has additional subdomain(s) that are not in the common domain
    2. 2703347Domain d1fz1b_: 1fz1 B: [16745]
      Other proteins in same PDB: d1fz1c_, d1fz1d_, d1fz1e_, d1fz1f_
      complexed with ca, fe, fmt
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 1fz2:
    1. 2703362Domain d1fz2a_: 1fz2 A: [16764]
      Other proteins in same PDB: d1fz2c_, d1fz2d_, d1fz2e_, d1fz2f_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
    2. 2703363Domain d1fz2b_: 1fz2 B: [16765]
      Other proteins in same PDB: d1fz2c_, d1fz2d_, d1fz2e_, d1fz2f_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 1fz3:
    1. 2703350Domain d1fz3a_: 1fz3 A: [16748]
      Other proteins in same PDB: d1fz3c_, d1fz3d_, d1fz3e_, d1fz3f_
      complexed with ca, fe, fmt
      has additional subdomain(s) that are not in the common domain
    2. 2703351Domain d1fz3b_: 1fz3 B: [16749]
      Other proteins in same PDB: d1fz3c_, d1fz3d_, d1fz3e_, d1fz3f_
      complexed with ca, fe, fmt
      has additional subdomain(s) that are not in the common domain
  6. Domain(s) for 1fz4:
    1. 2703382Domain d1fz4a_: 1fz4 A: [16772]
      Other proteins in same PDB: d1fz4c_, d1fz4d_, d1fz4e_, d1fz4f_
      complexed with ca, fe, fmt
      has additional subdomain(s) that are not in the common domain
    2. 2703383Domain d1fz4b_: 1fz4 B: [16773]
      Other proteins in same PDB: d1fz4c_, d1fz4d_, d1fz4e_, d1fz4f_
      complexed with ca, fe, fmt
      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 1fz5:
    1. 2703380Domain d1fz5a_: 1fz5 A: [16776]
      Other proteins in same PDB: d1fz5c_, d1fz5d_, d1fz5e_, d1fz5f_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
    2. 2703381Domain d1fz5b_: 1fz5 B: [16777]
      Other proteins in same PDB: d1fz5c_, d1fz5d_, d1fz5e_, d1fz5f_
      complexed with ca, fe2
      has additional subdomain(s) that are not in the common domain
  8. Domain(s) for 1fz6:
    1. 2703366Domain d1fz6a_: 1fz6 A: [60116]
      Other proteins in same PDB: d1fz6c_, d1fz6d_, d1fz6e_, d1fz6f_
      complexed with ca, fe, moh
      has additional subdomain(s) that are not in the common domain
    2. 2703367Domain d1fz6b_: 1fz6 B: [60117]
      Other proteins in same PDB: d1fz6c_, d1fz6d_, d1fz6e_, d1fz6f_
      complexed with ca, fe, moh
      has additional subdomain(s) that are not in the common domain
  9. Domain(s) for 1fz7:
    1. 2703354Domain d1fz7a_: 1fz7 A: [16752]
      Other proteins in same PDB: d1fz7c_, d1fz7d_, d1fz7e_, d1fz7f_
      complexed with ca, eoh, fe, fmt
      has additional subdomain(s) that are not in the common domain
    2. 2703355Domain d1fz7b_: 1fz7 B: [16753]
      Other proteins in same PDB: d1fz7c_, d1fz7d_, d1fz7e_, d1fz7f_
      complexed with ca, eoh, fe, fmt
      has additional subdomain(s) that are not in the common domain
  10. Domain(s) for 1fz8:
    1. 2703364Domain d1fz8a_: 1fz8 A: [60122]
      Other proteins in same PDB: d1fz8c_, d1fz8d_, d1fz8e_, d1fz8f_
      complexed with 2bm, ca, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703365Domain d1fz8b_: 1fz8 B: [60123]
      Other proteins in same PDB: d1fz8c_, d1fz8d_, d1fz8e_, d1fz8f_
      complexed with 2bm, ca, fe
      has additional subdomain(s) that are not in the common domain
  11. Domain(s) for 1fz9:
    1. 2703376Domain d1fz9a_: 1fz9 A: [60128]
      Other proteins in same PDB: d1fz9c_, d1fz9d_, d1fz9e_, d1fz9f_
      complexed with ca, eti, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703377Domain d1fz9b_: 1fz9 B: [60129]
      Other proteins in same PDB: d1fz9c_, d1fz9d_, d1fz9e_, d1fz9f_
      complexed with ca, eti, fe
      has additional subdomain(s) that are not in the common domain
  12. Domain(s) for 1fzh:
    1. 2703384Domain d1fzha_: 1fzh A: [60134]
      Other proteins in same PDB: d1fzhc_, d1fzhd_, d1fzhe_, d1fzhf_
      complexed with ca, fe, xe
      has additional subdomain(s) that are not in the common domain
    2. 2703385Domain d1fzhb_: 1fzh B: [60135]
      Other proteins in same PDB: d1fzhc_, d1fzhd_, d1fzhe_, d1fzhf_
      complexed with ca, fe, xe
      has additional subdomain(s) that are not in the common domain
  13. Domain(s) for 1fzi:
    1. 2703390Domain d1fzia_: 1fzi A: [60140]
      Other proteins in same PDB: d1fzic_, d1fzid_, d1fzie_, d1fzif_
      complexed with fe, xe
      has additional subdomain(s) that are not in the common domain
    2. 2703391Domain d1fzib_: 1fzi B: [60141]
      Other proteins in same PDB: d1fzic_, d1fzid_, d1fzie_, d1fzif_
      complexed with fe, xe
      has additional subdomain(s) that are not in the common domain
  14. Domain(s) for 1mmo:
    1. 2703386Domain d1mmod_: 1mmo D: [16770]
      Other proteins in same PDB: d1mmob_, d1mmoc_, d1mmog_, d1mmoh_
      complexed with acy, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703387Domain d1mmoe_: 1mmo E: [16771]
      Other proteins in same PDB: d1mmob_, d1mmoc_, d1mmog_, d1mmoh_
      complexed with acy, fe
      has additional subdomain(s) that are not in the common domain
  15. Domain(s) for 1mty:
    1. 2703340Domain d1mtyd_: 1mty D: [16742]
      Other proteins in same PDB: d1mtyb_, d1mtyc_, d1mtyg_, d1mtyh_
      complexed with fe
      has additional subdomain(s) that are not in the common domain
    2. 2703341Domain d1mtye_: 1mty E: [16743]
      Other proteins in same PDB: d1mtyb_, d1mtyc_, d1mtyg_, d1mtyh_
      complexed with fe
      has additional subdomain(s) that are not in the common domain
  16. Domain(s) for 1xmf:
    1. 2703388Domain d1xmfa_: 1xmf A: [122147]
      Other proteins in same PDB: d1xmfc1, d1xmfd_, d1xmfe_, d1xmff_
      automated match to d1fz1a_
      complexed with ca, mn
      has additional subdomain(s) that are not in the common domain
    2. 2703389Domain d1xmfb_: 1xmf B: [122148]
      Other proteins in same PDB: d1xmfc1, d1xmfd_, d1xmfe_, d1xmff_
      automated match to d1fz1a_
      complexed with ca, mn
      has additional subdomain(s) that are not in the common domain
  17. Domain(s) for 1xmg:
    1. 2703368Domain d1xmga_: 1xmg A: [122153]
      Other proteins in same PDB: d1xmgc_, d1xmgd_, d1xmge_, d1xmgf_
      automated match to d1fz1a_
      complexed with ca
      has additional subdomain(s) that are not in the common domain
    2. 2703369Domain d1xmgb_: 1xmg B: [122154]
      Other proteins in same PDB: d1xmgc_, d1xmgd_, d1xmge_, d1xmgf_
      automated match to d1fz1a_
      complexed with ca
      has additional subdomain(s) that are not in the common domain
  18. Domain(s) for 1xmh:
    1. 2703372Domain d1xmha_: 1xmh A: [122159]
      Other proteins in same PDB: d1xmhc_, d1xmhd_, d1xmhe_, d1xmhf_
      automated match to d1fz1a_
      complexed with co
      has additional subdomain(s) that are not in the common domain
    2. 2703373Domain d1xmhb_: 1xmh B: [122160]
      Other proteins in same PDB: d1xmhc_, d1xmhd_, d1xmhe_, d1xmhf_
      automated match to d1fz1a_
      complexed with co
      has additional subdomain(s) that are not in the common domain
  19. Domain(s) for 1xu3:
    1. 2703374Domain d1xu3a_: 1xu3 A: [122320]
      Other proteins in same PDB: d1xu3c_, d1xu3d_, d1xu3e_, d1xu3f_
      automated match to d1fz1a_
      complexed with bml, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703375Domain d1xu3b_: 1xu3 B: [122321]
      Other proteins in same PDB: d1xu3c_, d1xu3d_, d1xu3e_, d1xu3f_
      automated match to d1fz1a_
      complexed with bml, fe
      has additional subdomain(s) that are not in the common domain
  20. Domain(s) for 1xu5:
    1. 2703348Domain d1xu5a_: 1xu5 A: [122326]
      Other proteins in same PDB: d1xu5c_, d1xu5d_, d1xu5e_, d1xu5f_
      automated match to d1fz1a_
      complexed with fe, iph, oh
      has additional subdomain(s) that are not in the common domain
    2. 2703349Domain d1xu5b_: 1xu5 B: [122327]
      Other proteins in same PDB: d1xu5c_, d1xu5d_, d1xu5e_, d1xu5f_
      automated match to d1fz1a_
      complexed with fe, iph, oh
      has additional subdomain(s) that are not in the common domain
  21. Domain(s) for 1xvb:
    1. 2703342Domain d1xvba_: 1xvb A: [122344]
      Other proteins in same PDB: d1xvbc_, d1xvbd_, d1xvbe_, d1xvbf_
      automated match to d1fz1a_
      complexed with 3br, bbu, bbx, bhl, ca, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703343Domain d1xvbb_: 1xvb B: [122345]
      Other proteins in same PDB: d1xvbc_, d1xvbd_, d1xvbe_, d1xvbf_
      automated match to d1fz1a_
      complexed with 3br, bbu, bbx, bhl, ca, fe
      has additional subdomain(s) that are not in the common domain
  22. Domain(s) for 1xvc:
    1. 2703356Domain d1xvca_: 1xvc A: [122350]
      Other proteins in same PDB: d1xvcc_, d1xvcd_, d1xvce_, d1xvcf_
      automated match to d1fz1a_
      complexed with 5br, bmm, br, fe, fmt
      has additional subdomain(s) that are not in the common domain
    2. 2703357Domain d1xvcb_: 1xvc B: [122351]
      Other proteins in same PDB: d1xvcc_, d1xvcd_, d1xvce_, d1xvcf_
      automated match to d1fz1a_
      complexed with 5br, bmm, br, fe, fmt
      has additional subdomain(s) that are not in the common domain
  23. Domain(s) for 1xvd:
    1. 2703370Domain d1xvda_: 1xvd A: [122356]
      Other proteins in same PDB: d1xvdc_, d1xvdd_, d1xvde_, d1xvdf_
      automated match to d1fz1a_
      complexed with fe, fpn
      has additional subdomain(s) that are not in the common domain
    2. 2703371Domain d1xvdb_: 1xvd B: [122357]
      Other proteins in same PDB: d1xvdc_, d1xvdd_, d1xvde_, d1xvdf_
      automated match to d1fz1a_
      complexed with fe, fpn
      has additional subdomain(s) that are not in the common domain
  24. Domain(s) for 1xve:
    1. 2703378Domain d1xvea_: 1xve A: [122362]
      Other proteins in same PDB: d1xvec_, d1xved_, d1xvee_, d1xvef_
      automated match to d1fz1a_
      complexed with 3bb, ca, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703379Domain d1xveb_: 1xve B: [122363]
      Other proteins in same PDB: d1xvec_, d1xved_, d1xvee_, d1xvef_
      automated match to d1fz1a_
      complexed with 3bb, ca, fe
      has additional subdomain(s) that are not in the common domain
  25. Domain(s) for 1xvf:
    1. 2703352Domain d1xvfa_: 1xvf A: [122368]
      Other proteins in same PDB: d1xvfc_, d1xvfd_, d1xvfe_, d1xvff_
      automated match to d1fz1a_
      complexed with 3cl, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703353Domain d1xvfb_: 1xvf B: [122369]
      Other proteins in same PDB: d1xvfc_, d1xvfd_, d1xvfe_, d1xvff_
      automated match to d1fz1a_
      complexed with 3cl, fe
      has additional subdomain(s) that are not in the common domain
  26. Domain(s) for 1xvg:
    1. 2703344Domain d1xvga_: 1xvg A: [122374]
      Other proteins in same PDB: d1xvgc_, d1xvgd_, d1xvge_, d1xvgf_
      automated match to d1fz1a_
      complexed with brj, ca, fe
      has additional subdomain(s) that are not in the common domain
    2. 2703345Domain d1xvgb_: 1xvg B: [122375]
      Other proteins in same PDB: d1xvgc_, d1xvgd_, d1xvge_, d1xvgf_
      automated match to d1fz1a_
      complexed with brj, ca, fe
      has additional subdomain(s) that are not in the common domain

More info for Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase alpha subunit

Timeline for Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase alpha subunit: