Lineage for Protein: Maltogenic amylase, central domain

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081851Protein Maltogenic amylase, central domain [51465] (4 species)
    contains an additional N-terminal domain

Species:

  1. 2081852Bacillus sp., cyclomaltodextrinase [TaxId:1409] [75060] (1 PDB entry)
  2. 2081855Thermoactinomyces vulgaris, TVAI [TaxId:2026] [75061] (8 PDB entries)
    1. Domain for 1izj:
    2. Domain for 1izk:
    3. Domains for 1ji1:
      1. 2081857Domain d1ji1a3: 1ji1 A:123-554 [71668]
        Other proteins in same PDB: d1ji1a1, d1ji1a2, d1ji1b1, d1ji1b2
        complexed with ca
      2. 2081858Domain d1ji1b3: 1ji1 B:123-554 [71671]
        Other proteins in same PDB: d1ji1a1, d1ji1a2, d1ji1b1, d1ji1b2
        complexed with ca
    4. Domain for 1uh2:
    5. Domain for 1uh3:
    6. Domain for 1uh4:
    7. Domain for 2d0g:
    8. Domain for 2d0h:
  3. 2081865Thermoactinomyces vulgaris, TVAII [TaxId:2026] [51467] (12 PDB entries)
    1. Domains for 1bvz:
      1. 2081874Domain d1bvza3: 1bvz A:121-502 [28770]
        Other proteins in same PDB: d1bvza1, d1bvza2, d1bvzb1, d1bvzb2
      2. 2081875Domain d1bvzb3: 1bvz B:121-502 [28771]
        Other proteins in same PDB: d1bvza1, d1bvza2, d1bvzb1, d1bvzb2
    2. Domains for 1g1y:
      1. 2081878Domain d1g1ya3: 1g1y A:121-502 [60212]
        Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
        complexed with bcd
      2. 2081879Domain d1g1yb3: 1g1y B:121-502 [60215]
        Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
        complexed with bcd
    3. Domains for 1jf5:
      1. 2081884Domain d1jf5a3: 1jf5 A:121-502 [71646]
        Other proteins in same PDB: d1jf5a1, d1jf5a2, d1jf5b1, d1jf5b2
        complexed with ca; mutant
      2. 2081885Domain d1jf5b3: 1jf5 B:121-502 [71649]
        Other proteins in same PDB: d1jf5a1, d1jf5a2, d1jf5b1, d1jf5b2
        complexed with ca; mutant
    4. Domains for 1jf6:
      1. 2081882Domain d1jf6a3: 1jf6 A:121-502 [71652]
        Other proteins in same PDB: d1jf6a1, d1jf6a2, d1jf6b1, d1jf6b2
        complexed with ca; mutant
      2. 2081883Domain d1jf6b3: 1jf6 B:121-502 [71655]
        Other proteins in same PDB: d1jf6a1, d1jf6a2, d1jf6b1, d1jf6b2
        complexed with ca; mutant
    5. Domains for 1ji2:
      1. 2081870Domain d1ji2a3: 1ji2 A:121-502 [71674]
        Other proteins in same PDB: d1ji2a1, d1ji2a2, d1ji2b1, d1ji2b2
        complexed with ca
      2. 2081871Domain d1ji2b3: 1ji2 B:121-502 [71677]
        Other proteins in same PDB: d1ji2a1, d1ji2a2, d1ji2b1, d1ji2b2
        complexed with ca
    6. Domains for 1jib:
      1. 2081888Domain d1jiba3: 1jib A:121-502 [63071]
        Other proteins in same PDB: d1jiba1, d1jiba2, d1jibb1, d1jibb2
        complexed with mtt
      2. 2081889Domain d1jibb3: 1jib B:121-502 [63074]
        Other proteins in same PDB: d1jiba1, d1jiba2, d1jibb1, d1jibb2
        complexed with mtt
    7. Domains for 1jl8:
      1. 2081880Domain d1jl8a3: 1jl8 A:121-502 [63165]
        Other proteins in same PDB: d1jl8a1, d1jl8a2, d1jl8b1, d1jl8b2
        complexed with bcd
      2. 2081881Domain d1jl8b3: 1jl8 B:121-502 [63168]
        Other proteins in same PDB: d1jl8a1, d1jl8a2, d1jl8b1, d1jl8b2
        complexed with bcd
    8. Domains for 1vb9:
      1. 2081868Domain d1vb9a3: 1vb9 A:121-502 [119947]
        Other proteins in same PDB: d1vb9a1, d1vb9a2, d1vb9b1, d1vb9b2
        automated match to d1jl8a3
        complexed with ca
      2. 2081869Domain d1vb9b3: 1vb9 B:121-502 [119950]
        Other proteins in same PDB: d1vb9a1, d1vb9a2, d1vb9b1, d1vb9b2
        automated match to d1jl8a3
        complexed with ca
    9. Domains for 1vfk:
      1. 2081876Domain d1vfka5: 1vfk A:121-502 [303223]
        Other proteins in same PDB: d1vfka4, d1vfka6, d1vfkb4, d1vfkb6
        automated match to d1bvza3
        complexed with ca, glc
      2. 2081877Domain d1vfkb5: 1vfk B:121-502 [303226]
        Other proteins in same PDB: d1vfka4, d1vfka6, d1vfkb4, d1vfkb6
        automated match to d1bvza3
        complexed with ca, glc
    10. Domains for 1wzm:
      1. 2081886Domain d1wzma3: 1wzm A:121-502 [121521]
        Other proteins in same PDB: d1wzma1, d1wzma2, d1wzmb1, d1wzmb2
        automatically matched to d1bvza3
        complexed with ca
      2. 2081887Domain d1wzmb3: 1wzm B:121-502 [121524]
        Other proteins in same PDB: d1wzma1, d1wzma2, d1wzmb1, d1wzmb2
        automatically matched to d1bvza3
        complexed with ca
    11. Domains for 2d2o:
      1. 2081866Domain d2d2oa3: 2d2o A:121-502 [131178]
        Other proteins in same PDB: d2d2oa1, d2d2oa2, d2d2ob1, d2d2ob2
        automated match to d1jl8a3
        complexed with ca
      2. 2081867Domain d2d2ob3: 2d2o B:121-502 [131181]
        Other proteins in same PDB: d2d2oa1, d2d2oa2, d2d2ob1, d2d2ob2
        automated match to d1jl8a3
        complexed with ca
    12. Domains for 3a6o:
      1. 2081872Domain d3a6oa3: 3a6o A:121-502 [171823]
        Other proteins in same PDB: d3a6oa1, d3a6oa2, d3a6ob1, d3a6ob2
        automated match to d1ji2a3
        complexed with are, ca
      2. 2081873Domain d3a6ob3: 3a6o B:121-502 [171826]
        Other proteins in same PDB: d3a6oa1, d3a6oa2, d3a6ob1, d3a6ob2
        automated match to d1ji2a3
        complexed with are, ca
  4. 2081890Thermus sp. [TaxId:275] [51466] (2 PDB entries)
    1. Domains for 1gvi:
      1. 2081891Domain d1gvia3: 1gvi A:124-505 [70606]
        Other proteins in same PDB: d1gvia1, d1gvia2, d1gvib1, d1gvib2
        complexed with bcd
      2. 2081892Domain d1gvib3: 1gvi B:124-505 [70609]
        Other proteins in same PDB: d1gvia1, d1gvia2, d1gvib1, d1gvib2
        complexed with bcd
    2. Domains for 1sma:
      1. 2081893Domain d1smaa3: 1sma A:124-505 [28768]
        Other proteins in same PDB: d1smaa1, d1smaa2, d1smab1, d1smab2
      2. 2081894Domain d1smab3: 1sma B:124-505 [28769]
        Other proteins in same PDB: d1smaa1, d1smaa2, d1smab1, d1smab2

More info for Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Maltogenic amylase, central domain from c.1.8.1: Amylase, catalytic domain: