Lineage for Species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2830199Protein Maltogenic amylase, central domain [51465] (4 species)
    contains an additional N-terminal domain
  7. 2830213Species Thermoactinomyces vulgaris, TVAII [TaxId:2026] [51467] (12 PDB entries)

PDB entries in Species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]:

  1. Domain(s) for 1bvz:
    1. 2830232Domain d1bvza3: 1bvz A:121-502 [28770]
      Other proteins in same PDB: d1bvza1, d1bvza2, d1bvzb1, d1bvzb2
      has additional subdomain(s) that are not in the common domain
    2. 2830233Domain d1bvzb3: 1bvz B:121-502 [28771]
      Other proteins in same PDB: d1bvza1, d1bvza2, d1bvzb1, d1bvzb2
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1g1y:
    1. 2830230Domain d1g1ya3: 1g1y A:121-502 [60212]
      Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
      has additional subdomain(s) that are not in the common domain
    2. 2830231Domain d1g1yb3: 1g1y B:121-502 [60215]
      Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 1jf5:
    1. 2830226Domain d1jf5a3: 1jf5 A:121-502 [71646]
      Other proteins in same PDB: d1jf5a1, d1jf5a2, d1jf5b1, d1jf5b2
      complexed with ca; mutant
      has additional subdomain(s) that are not in the common domain
    2. 2830227Domain d1jf5b3: 1jf5 B:121-502 [71649]
      Other proteins in same PDB: d1jf5a1, d1jf5a2, d1jf5b1, d1jf5b2
      complexed with ca; mutant
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 1jf6:
    1. 2830224Domain d1jf6a3: 1jf6 A:121-502 [71652]
      Other proteins in same PDB: d1jf6a1, d1jf6a2, d1jf6b1, d1jf6b2
      complexed with ca; mutant
      has additional subdomain(s) that are not in the common domain
    2. 2830225Domain d1jf6b3: 1jf6 B:121-502 [71655]
      Other proteins in same PDB: d1jf6a1, d1jf6a2, d1jf6b1, d1jf6b2
      complexed with ca; mutant
      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 1ji2:
    1. 2830218Domain d1ji2a3: 1ji2 A:121-502 [71674]
      Other proteins in same PDB: d1ji2a1, d1ji2a2, d1ji2b1, d1ji2b2
      complexed with ca
      has additional subdomain(s) that are not in the common domain
    2. 2830219Domain d1ji2b3: 1ji2 B:121-502 [71677]
      Other proteins in same PDB: d1ji2a1, d1ji2a2, d1ji2b1, d1ji2b2
      complexed with ca
      has additional subdomain(s) that are not in the common domain
  6. Domain(s) for 1jib:
    1. 2830236Domain d1jiba3: 1jib A:121-502 [63071]
      Other proteins in same PDB: d1jiba1, d1jiba2, d1jibb1, d1jibb2
      has additional subdomain(s) that are not in the common domain
    2. 2830237Domain d1jibb3: 1jib B:121-502 [63074]
      Other proteins in same PDB: d1jiba1, d1jiba2, d1jibb1, d1jibb2
      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 1jl8:
    1. 2830234Domain d1jl8a3: 1jl8 A:121-502 [63165]
      Other proteins in same PDB: d1jl8a1, d1jl8a2, d1jl8b1, d1jl8b2
      has additional subdomain(s) that are not in the common domain
    2. 2830235Domain d1jl8b3: 1jl8 B:121-502 [63168]
      Other proteins in same PDB: d1jl8a1, d1jl8a2, d1jl8b1, d1jl8b2
      has additional subdomain(s) that are not in the common domain
  8. Domain(s) for 1vb9:
    1. 2830216Domain d1vb9a3: 1vb9 A:121-502 [119947]
      Other proteins in same PDB: d1vb9a1, d1vb9a2, d1vb9b1, d1vb9b2
      automated match to d1jl8a3
      complexed with ca

      has additional subdomain(s) that are not in the common domain
    2. 2830217Domain d1vb9b3: 1vb9 B:121-502 [119950]
      Other proteins in same PDB: d1vb9a1, d1vb9a2, d1vb9b1, d1vb9b2
      automated match to d1jl8a3
      complexed with ca

      has additional subdomain(s) that are not in the common domain
  9. Domain(s) for 1vfk:
    1. 2830222Domain d1vfka5: 1vfk A:121-502 [303223]
      Other proteins in same PDB: d1vfka4, d1vfka6, d1vfkb4, d1vfkb6
      automated match to d1bvza3
      complexed with ca, glc

      has additional subdomain(s) that are not in the common domain
    2. 2830223Domain d1vfkb5: 1vfk B:121-502 [303226]
      Other proteins in same PDB: d1vfka4, d1vfka6, d1vfkb4, d1vfkb6
      automated match to d1bvza3
      complexed with ca, glc

      has additional subdomain(s) that are not in the common domain
  10. Domain(s) for 1wzm:
    1. 2830228Domain d1wzma3: 1wzm A:121-502 [121521]
      Other proteins in same PDB: d1wzma1, d1wzma2, d1wzmb1, d1wzmb2
      automatically matched to d1bvza3
      complexed with ca

      has additional subdomain(s) that are not in the common domain
    2. 2830229Domain d1wzmb3: 1wzm B:121-502 [121524]
      Other proteins in same PDB: d1wzma1, d1wzma2, d1wzmb1, d1wzmb2
      automatically matched to d1bvza3
      complexed with ca

      has additional subdomain(s) that are not in the common domain
  11. Domain(s) for 2d2o:
    1. 2830214Domain d2d2oa3: 2d2o A:121-502 [131178]
      Other proteins in same PDB: d2d2oa1, d2d2oa2, d2d2ob1, d2d2ob2
      automated match to d1jl8a3
      complexed with ca

      has additional subdomain(s) that are not in the common domain
    2. 2830215Domain d2d2ob3: 2d2o B:121-502 [131181]
      Other proteins in same PDB: d2d2oa1, d2d2oa2, d2d2ob1, d2d2ob2
      automated match to d1jl8a3
      complexed with ca

      has additional subdomain(s) that are not in the common domain
  12. Domain(s) for 3a6o:
    1. 2830220Domain d3a6oa3: 3a6o A:121-502 [171823]
      Other proteins in same PDB: d3a6oa1, d3a6oa2, d3a6ob1, d3a6ob2
      automated match to d1ji2a3
      complexed with are, ca

      has additional subdomain(s) that are not in the common domain
    2. 2830221Domain d3a6ob3: 3a6o B:121-502 [171826]
      Other proteins in same PDB: d3a6oa1, d3a6oa2, d3a6ob1, d3a6ob2
      automated match to d1ji2a3
      complexed with are, ca

      has additional subdomain(s) that are not in the common domain

More info for Species Thermoactinomyces vulgaris, TVAII [TaxId:2026] from c.1.8.1 Maltogenic amylase, central domain

Timeline for Species Thermoactinomyces vulgaris, TVAII [TaxId:2026] from c.1.8.1 Maltogenic amylase, central domain: