Lineage for d1gvib3 (1gvi B:124-505)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2416558Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2416559Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2416919Protein Maltogenic amylase, central domain [51465] (4 species)
    contains an additional N-terminal domain
  7. 2416958Species Thermus sp. [TaxId:275] [51466] (2 PDB entries)
  8. 2416960Domain d1gvib3: 1gvi B:124-505 [70609]
    Other proteins in same PDB: d1gvia1, d1gvia2, d1gvib1, d1gvib2
    complexed with bcd

Details for d1gvib3

PDB Entry: 1gvi (more details), 3.3 Å

PDB Description: thermus maltogenic amylase in complex with beta-cd
PDB Compounds: (B:) maltogenic amylase

SCOPe Domain Sequences for d1gvib3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gvib3 c.1.8.1 (B:124-505) Maltogenic amylase, central domain {Thermus sp. [TaxId: 275]}

SCOPe Domain Coordinates for d1gvib3:

Click to download the PDB-style file with coordinates for d1gvib3.
(The format of our PDB-style files is described here.)

Timeline for d1gvib3: