Lineage for d1g1yb3 (1g1y B:121-502)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081851Protein Maltogenic amylase, central domain [51465] (4 species)
    contains an additional N-terminal domain
  7. 2081865Species Thermoactinomyces vulgaris, TVAII [TaxId:2026] [51467] (12 PDB entries)
  8. 2081879Domain d1g1yb3: 1g1y B:121-502 [60215]
    Other proteins in same PDB: d1g1ya1, d1g1ya2, d1g1yb1, d1g1yb2
    complexed with bcd

Details for d1g1yb3

PDB Entry: 1g1y (more details), 3 Å

PDB Description: crystal structure of alpha-amylase ii (tvaii) from thermoactinomyces vulgaris r-47 and beta-cyclodextrin complex
PDB Compounds: (B:) alpha-amylase II

SCOPe Domain Sequences for d1g1yb3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1g1yb3 c.1.8.1 (B:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}

SCOPe Domain Coordinates for d1g1yb3:

Click to download the PDB-style file with coordinates for d1g1yb3.
(The format of our PDB-style files is described here.)

Timeline for d1g1yb3: