Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143 |
Superfamily d.15.1: Ubiquitin-like [54236] (11 families) |
Family d.15.1.3: GABARAP-like [54253] (4 proteins) intracellular membrane trafficking and fusion proteins automatically mapped to Pfam PF02991 |
Protein automated matches [190358] (6 species) not a true protein |
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188724] (3 PDB entries) |
Domain d2kq7a1: 2kq7 A:3-119 [242614] Other proteins in same PDB: d2kq7a2 automated match to d3d32a_ |
Domain d2kwca_: 2kwc A: [242680] automated match to d1eo6a_ |
Domain d2zpna_: 2zpn A: [171401] automated match to d1eo6a_ complexed with so4 |
Domain d2zpnb_: 2zpn B: [171402] automated match to d1eo6a_ complexed with so4 |
Domain d2zpnc_: 2zpn C: [171403] automated match to d1eo6a_ complexed with so4 |
Domain d2zpnd_: 2zpn D: [171404] automated match to d1eo6a_ complexed with so4 |
Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189812] (4 PDB entries) |
Domain d2li5a1: 2li5 A:1-116 [242890] Other proteins in same PDB: d2li5a2 automated match to d1eo6a_ |
Domain d3ruib_: 3rui B: [185189] automated match to d1kota_ complexed with zn |
Domain d3vh3b_: 3vh3 B: [186495] automated match to d1eo6a_ complexed with zn |
Domain d3vh4b_: 3vh4 B: [186496] automated match to d1eo6a_ complexed with atp, mg, zn |
Human (Homo sapiens) [TaxId:9606] [187279] (33 PDB entries) |
Domain d2l8ja1: 2l8j A:2-115 [242808] Other proteins in same PDB: d2l8ja2 automated match to d3wana_ |
Domain d2r2qa1: 2r2q A:3-111 [167943] Other proteins in same PDB: d2r2qa2, d2r2qb2 automated match to d1gnua_ complexed with mpd, unx |
Domain d2r2qb1: 2r2q B:3-111 [167944] Other proteins in same PDB: d2r2qa2, d2r2qb2 automated match to d1gnua_ complexed with mpd, unx |
Domain d2zjda_: 2zjd A: [154484] automated match to d1v49a_ |
Domain d2zjdc_: 2zjd C: [154485] automated match to d1v49a_ |
Domain d3ecia_: 3eci A: [174827] automated match to d1v49a_ |
Domain d3ecib_: 3eci B: [174828] automated match to d1v49a_ |
Domain d3vtua1: 3vtu A:6-123 [218102] Other proteins in same PDB: d3vtua2 automated match to d2zjdc_ complexed with so4 |
Domain d3vtva_: 3vtv A: [218103] automated match to d2zjdc_ complexed with so4 |
Domain d3vtwa_: 3vtw A: [250680] automated match to d2zjdc_ complexed with so4 |
Domain d3vtwb_: 3vtw B: [250681] automated match to d2zjdc_ complexed with so4 |
Domain d3vtwc_: 3vtw C: [250682] automated match to d2zjdc_ complexed with so4 |
Domain d3wala_: 3wal A: [230198] automated match to d3vtua_ complexed with mlt |
Domain d3wana_: 3wan A: [230201] automated match to d3vtva_ complexed with mpd |
Domain d3wanb_: 3wan B: [233939] automated match to d3wana_ complexed with mpd |
Domain d3waoa_: 3wao A: [230199] automated match to d3vtva_ |
Domain d3waob_: 3wao B: [230196] automated match to d3vtva_ |
Domain d3waoc_: 3wao C: [230197] automated match to d3vtva_ |
Domain d3waod_: 3wao D: [233940] automated match to d3waoa_ |
Domain d3wapa_: 3wap A: [250739] automated match to d3wana_ |
Domain d3x0wa1: 3x0w A:29-145 [268087] Other proteins in same PDB: d3x0wa2, d3x0wb2 automated match to d3waoa_ |
Domain d3x0wb1: 3x0w B:29-145 [268088] Other proteins in same PDB: d3x0wa2, d3x0wb2 automated match to d3waoa_ |
Domain d4co7a1: 4co7 A:1-117 [268235] Other proteins in same PDB: d4co7a2, d4co7b2 automated match to d3dowa_ |
Domain d4co7b1: 4co7 B:1-117 [268236] Other proteins in same PDB: d4co7a2, d4co7b2 automated match to d3dowa_ |
Domain d4waaa1: 4waa A:18-134 [276754] Other proteins in same PDB: d4waaa2, d4waab2 automated match to d3waoa_ |
Domain d4waab1: 4waa B:18-134 [276759] Other proteins in same PDB: d4waaa2, d4waab2 automated match to d3waoa_ |
Domain d4zdva1: 4zdv A:2-119 [273584] Other proteins in same PDB: d4zdva2 automated match to d3wanb_ |
Domain d5cx3a_: 5cx3 A: [320265] automated match to d3wanb_ complexed with gol |
Domain d5cx3b_: 5cx3 B: [320305] automated match to d3wanb_ complexed with gol |
Domain d5cx3c_: 5cx3 C: [320324] automated match to d3wanb_ complexed with gol |
Domain d5cx3d_: 5cx3 D: [320266] automated match to d3wanb_ complexed with gol |
Domain d5dcna1: 5dcn A:2-119 [313982] Other proteins in same PDB: d5dcna2 automated match to d3waoa_ complexed with so4 |
Domain d5dpra_: 5dpr A: [323263] automated match to d3wanb_ |
Domain d5dprb_: 5dpr B: [323213] automated match to d3wanb_ |
Domain d5dprc_: 5dpr C: [323266] automated match to d3wanb_ |
Domain d5dprd_: 5dpr D: [323214] automated match to d3wanb_ |
Domain d5dpwa_: 5dpw A: [323229] automated match to d3wapa_ |
Domain d5dpwc_: 5dpw C: [323217] automated match to d3wapa_ |
Domain d5dpwe_: 5dpw E: [323216] automated match to d3wapa_ |
Domain d5dpwg_: 5dpw G: [323248] automated match to d3wapa_ |
Domain d5dpwi_: 5dpw I: [323234] automated match to d3wapa_ |
Domain d5dpwk_: 5dpw K: [323210] automated match to d3wapa_ |
Domain d5dpwm_: 5dpw M: [323247] automated match to d3wapa_ |
Domain d5dpwo_: 5dpw O: [323355] automated match to d3wapa_ |
Domain d5ms2b_: 5ms2 B: [333219] automated match to d3waoa_ |
Domain d5ms5a1: 5ms5 A:4-117 [333214] Other proteins in same PDB: d5ms5a2 automated match to d3waoa_ complexed with gol, so4 |
Domain d5ms5b1: 5ms5 B:4-118 [333218] Other proteins in same PDB: d5ms5a2 automated match to d3waoa_ complexed with gol, so4 |
Domain d5ms6a1: 5ms6 A:4-117 [333344] Other proteins in same PDB: d5ms6a2, d5ms6b2 automated match to d3waoa_ |
Domain d5ms6b1: 5ms6 B:3-117 [333241] Other proteins in same PDB: d5ms6a2, d5ms6b2 automated match to d3waoa_ |
Domain d5v4ka_: 5v4k A: [334315] automated match to d3waoa_ complexed with gol, so4 |
Domain d5v4kb_: 5v4k B: [334327] automated match to d3waoa_ complexed with gol, so4 |
Domain d5w9ac_: 5w9a C: [358664] automated match to d5ms5b1 complexed with zn |
Domain d5w9ad_: 5w9a D: [358784] automated match to d5ms5b1 complexed with zn |
Domain d5xaca1: 5xac A:2-118 [336738] Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2 automated match to d3wanb_ |
Domain d5xacb1: 5xac B:2-118 [336771] Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2 automated match to d3wanb_ |
Domain d5xacc1: 5xac C:2-116 [336748] Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2 automated match to d3wanb_ |
Domain d5xacd1: 5xac D:2-119 [336765] Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2 automated match to d3wanb_ |
Domain d5xada_: 5xad A: [336711] automated match to d2zjdc_ |
Domain d5xadb_: 5xad B: [336780] automated match to d2zjdc_ |
Domain d5xaea1: 5xae A:0-117 [336706] Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2 automated match to d3wanb_ |
Domain d5xaeb1: 5xae B:0-117 [336716] Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2 automated match to d3wanb_ |
Domain d5xaec1: 5xae C:0-117 [336786] Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2 automated match to d3wanb_ |
Domain d5xaed1: 5xae D:0-117 [336773] Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2 automated match to d3wanb_ |
Domain d6h8ca1: 6h8c A:3-116 [368390] Other proteins in same PDB: d6h8ca2 automated match to d1eo6b_ |
Domain d6j04a_: 6j04 A: [377076] automated match to d3vtva_ complexed with so4; mutant |
Domain d6j04b_: 6j04 B: [377050] automated match to d3vtva_ complexed with so4; mutant |
Domain d6j04c_: 6j04 C: [377070] automated match to d3vtva_ complexed with so4; mutant |
Domain d6j04d_: 6j04 D: [377061] automated match to d3vtva_ complexed with so4; mutant |
Domain d6lana_: 6lan A: [390853] automated match to d5dprb_ |
Domain d6tbea1: 6tbe A:8-122 [395670] Other proteins in same PDB: d6tbea2 automated match to d3vtva_ complexed with edo, nov |
Domain d7elga1: 7elg A:6-123 [421698] Other proteins in same PDB: d7elga2 automated match to d6lana_ complexed with 8z6, so4 |
Domain d7lk3a1: 7lk3 A:1-117 [403454] Other proteins in same PDB: d7lk3a2, d7lk3b2 automated match to d1v49a_ complexed with edo |
Domain d7lk3b1: 7lk3 B:1-117 [403458] Other proteins in same PDB: d7lk3a2, d7lk3b2 automated match to d1v49a_ complexed with edo |
Mouse (Mus musculus) [TaxId:10090] [352580] (2 PDB entries) |
Domain d5yipa1: 5yip A:1-117 [352581] Other proteins in same PDB: d5yipa2 automated match to d1gnua_ complexed with gol |
Domain d7cdba1: 7cdb A:1-117 [394450] Other proteins in same PDB: d7cdba2, d7cdbb2 automated match to d1gnua_ complexed with act, cit |
Domain d7cdbb1: 7cdb B:1-117 [394422] Other proteins in same PDB: d7cdba2, d7cdbb2 automated match to d1gnua_ complexed with act, cit |
Norway rat (Rattus norvegicus) [TaxId:10116] [187189] (3 PDB entries) |
Domain d2z0db_: 2z0d B: [140096] Other proteins in same PDB: d2z0da1 automated match to d1v49a_ |
Domain d2z0eb_: 2z0e B: [140097] Other proteins in same PDB: d2z0ea_ automated match to d1v49a_ |
Domain d2zzpb_: 2zzp B: [171616] Other proteins in same PDB: d2zzpa_ automated match to d1v49a_ |
Silkworm (Bombyx mori) [TaxId:7091] [189398] (1 PDB entry) |
Domain d3m95a_: 3m95 A: [180966] Other proteins in same PDB: d3m95b2 automated match to d1kota_ |
Domain d3m95b1: 3m95 B:1-115 [180967] Other proteins in same PDB: d3m95b2 automated match to d1kota_ |
Timeline for Protein automated matches from d.15.1.3: GABARAP-like: