SCOPe 2.08: Domain d5ms6b1: 5ms6 B:3-117

Lineage for d5ms6b1 (5ms6 B:3-117)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.3: GABARAP-like [54253] (4 proteins)
   intracellular membrane trafficking and fusion proteins
   automatically mapped to Pfam PF02991

6. Protein automated matches [190358] (6 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187279] (33 PDB entries)

8. Domain d5ms6b1: 5ms6 B:3-117 [333241]
   Other proteins in same PDB: d5ms6a2, d5ms6b2
   automated match to d3waoa_

Details for d5ms6b1

PDB Entry: 5ms6, 1.9 Å

PDB Description: high-salt structure of ravz lir2-fused human lc3b

PDB Compounds: (B:) Microtubule-associated proteins 1A/1B light chain 3B

SCOPe Domain Sequences for d5ms6b1:

Sequence; same for both SEQRES and ATOM records:

>d5ms6b1 d.15.1.3 (B:3-117) automated matches {Human (Homo sapiens) [TaxId: 9606]}
sektfkqrrtfeqrvedvrlireqhptkipviierykgekqlpvldktkflvpdhvnmse
likiirrrlqlnanqaffllvnghsmvsvstpisevyesekdedgflymvyasqe

Timeline for d5ms6b1:

• d5ms6b1 first appeared in SCOPe 2.06
  
• d5ms6b1 appears in SCOPe 2.07