Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2932720Family d.15.1.3: GABARAP-like [54253] (4 proteins)
    intracellular membrane trafficking and fusion proteins
    automatically mapped to Pfam PF02991
  6. 2932757Protein automated matches [190358] (6 species)
    not a true protein
  7. 2932770Species Human (Homo sapiens) [TaxId:9606] [187279] (33 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2l8j:
  2. Domain(s) for 2r2q:
    1. 2932778Domain d2r2qa1: 2r2q A:3-111 [167943]
      Other proteins in same PDB: d2r2qa2, d2r2qb2
      automated match to d1gnua_
      complexed with mpd, unx
    2. 2932779Domain d2r2qb1: 2r2q B:3-111 [167944]
      Other proteins in same PDB: d2r2qa2, d2r2qb2
      automated match to d1gnua_
      complexed with mpd, unx
  3. Domain(s) for 2zjd:
    1. 2932772Domain d2zjda_: 2zjd A: [154484]
      automated match to d1v49a_
    2. 2932773Domain d2zjdc_: 2zjd C: [154485]
      automated match to d1v49a_
  4. Domain(s) for 3eci:
    1. 2932822Domain d3ecia_: 3eci A: [174827]
      automated match to d1v49a_
    2. 2932823Domain d3ecib_: 3eci B: [174828]
      automated match to d1v49a_
  5. Domain(s) for 3vtu:
  6. Domain(s) for 3vtv:
  7. Domain(s) for 3vtw:
    1. 2932829Domain d3vtwa_: 3vtw A: [250680]
      automated match to d2zjdc_
      complexed with so4
    2. 2932830Domain d3vtwb_: 3vtw B: [250681]
      automated match to d2zjdc_
      complexed with so4
    3. 2932831Domain d3vtwc_: 3vtw C: [250682]
      automated match to d2zjdc_
      complexed with so4
  8. Domain(s) for 3wal:
  9. Domain(s) for 3wan:
    1. 2932788Domain d3wana_: 3wan A: [230201]
      automated match to d3vtva_
      complexed with mpd
    2. 2932789Domain d3wanb_: 3wan B: [233939]
      automated match to d3wana_
      complexed with mpd
  10. Domain(s) for 3wao:
    1. 2932836Domain d3waoa_: 3wao A: [230199]
      automated match to d3vtva_
    2. 2932837Domain d3waob_: 3wao B: [230196]
      automated match to d3vtva_
    3. 2932838Domain d3waoc_: 3wao C: [230197]
      automated match to d3vtva_
    4. 2932839Domain d3waod_: 3wao D: [233940]
      automated match to d3waoa_
  11. Domain(s) for 3wap:
  12. Domain(s) for 3x0w:
    1. 2932832Domain d3x0wa1: 3x0w A:29-145 [268087]
      Other proteins in same PDB: d3x0wa2, d3x0wb2
      automated match to d3waoa_
    2. 2932833Domain d3x0wb1: 3x0w B:29-145 [268088]
      Other proteins in same PDB: d3x0wa2, d3x0wb2
      automated match to d3waoa_
  13. Domain(s) for 4co7:
    1. 2932800Domain d4co7a1: 4co7 A:1-117 [268235]
      Other proteins in same PDB: d4co7a2, d4co7b2
      automated match to d3dowa_
    2. 2932801Domain d4co7b1: 4co7 B:1-117 [268236]
      Other proteins in same PDB: d4co7a2, d4co7b2
      automated match to d3dowa_
  14. Domain(s) for 4waa:
    1. 2932820Domain d4waaa1: 4waa A:18-134 [276754]
      Other proteins in same PDB: d4waaa2, d4waab2
      automated match to d3waoa_
    2. 2932821Domain d4waab1: 4waa B:18-134 [276759]
      Other proteins in same PDB: d4waaa2, d4waab2
      automated match to d3waoa_
  15. Domain(s) for 4zdv:
  16. Domain(s) for 5cx3:
    1. 2932816Domain d5cx3a_: 5cx3 A: [320265]
      automated match to d3wanb_
      complexed with gol
    2. 2932817Domain d5cx3b_: 5cx3 B: [320305]
      automated match to d3wanb_
      complexed with gol
    3. 2932818Domain d5cx3c_: 5cx3 C: [320324]
      automated match to d3wanb_
      complexed with gol
    4. 2932819Domain d5cx3d_: 5cx3 D: [320266]
      automated match to d3wanb_
      complexed with gol
  17. Domain(s) for 5dcn:
  18. Domain(s) for 5dpr:
    1. 2932824Domain d5dpra_: 5dpr A: [323263]
      automated match to d3wanb_
    2. 2932825Domain d5dprb_: 5dpr B: [323213]
      automated match to d3wanb_
    3. 2932826Domain d5dprc_: 5dpr C: [323266]
      automated match to d3wanb_
    4. 2932827Domain d5dprd_: 5dpr D: [323214]
      automated match to d3wanb_
  19. Domain(s) for 5dpw:
    1. 2932808Domain d5dpwa_: 5dpw A: [323229]
      automated match to d3wapa_
    2. 2932809Domain d5dpwc_: 5dpw C: [323217]
      automated match to d3wapa_
    3. 2932810Domain d5dpwe_: 5dpw E: [323216]
      automated match to d3wapa_
    4. 2932811Domain d5dpwg_: 5dpw G: [323248]
      automated match to d3wapa_
    5. 2932812Domain d5dpwi_: 5dpw I: [323234]
      automated match to d3wapa_
    6. 2932813Domain d5dpwk_: 5dpw K: [323210]
      automated match to d3wapa_
    7. 2932814Domain d5dpwm_: 5dpw M: [323247]
      automated match to d3wapa_
    8. 2932815Domain d5dpwo_: 5dpw O: [323355]
      automated match to d3wapa_
  20. Domain(s) for 5ms2:
  21. Domain(s) for 5ms5:
    1. 2932776Domain d5ms5a1: 5ms5 A:4-117 [333214]
      Other proteins in same PDB: d5ms5a2
      automated match to d3waoa_
      complexed with gol, so4
    2. 2932777Domain d5ms5b1: 5ms5 B:4-118 [333218]
      Other proteins in same PDB: d5ms5a2
      automated match to d3waoa_
      complexed with gol, so4
  22. Domain(s) for 5ms6:
    1. 2932791Domain d5ms6a1: 5ms6 A:4-117 [333344]
      Other proteins in same PDB: d5ms6a2, d5ms6b2
      automated match to d3waoa_
    2. 2932792Domain d5ms6b1: 5ms6 B:3-117 [333241]
      Other proteins in same PDB: d5ms6a2, d5ms6b2
      automated match to d3waoa_
  23. Domain(s) for 5v4k:
    1. 2932806Domain d5v4ka_: 5v4k A: [334315]
      automated match to d3waoa_
      complexed with gol, so4
    2. 2932807Domain d5v4kb_: 5v4k B: [334327]
      automated match to d3waoa_
      complexed with gol, so4
  24. Domain(s) for 5w9a:
    1. 2932834Domain d5w9ac_: 5w9a C: [358664]
      automated match to d5ms5b1
      complexed with zn
    2. 2932835Domain d5w9ad_: 5w9a D: [358784]
      automated match to d5ms5b1
      complexed with zn
  25. Domain(s) for 5xac:
    1. 2932782Domain d5xaca1: 5xac A:2-118 [336738]
      Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2
      automated match to d3wanb_
    2. 2932783Domain d5xacb1: 5xac B:2-118 [336771]
      Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2
      automated match to d3wanb_
    3. 2932784Domain d5xacc1: 5xac C:2-116 [336748]
      Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2
      automated match to d3wanb_
    4. 2932785Domain d5xacd1: 5xac D:2-119 [336765]
      Other proteins in same PDB: d5xaca2, d5xacb2, d5xacc2, d5xacd2
      automated match to d3wanb_
  26. Domain(s) for 5xad:
    1. 2932793Domain d5xada_: 5xad A: [336711]
      automated match to d2zjdc_
    2. 2932794Domain d5xadb_: 5xad B: [336780]
      automated match to d2zjdc_
  27. Domain(s) for 5xae:
    1. 2932802Domain d5xaea1: 5xae A:0-117 [336706]
      Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2
      automated match to d3wanb_
    2. 2932803Domain d5xaeb1: 5xae B:0-117 [336716]
      Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2
      automated match to d3wanb_
    3. 2932804Domain d5xaec1: 5xae C:0-117 [336786]
      Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2
      automated match to d3wanb_
    4. 2932805Domain d5xaed1: 5xae D:0-117 [336773]
      Other proteins in same PDB: d5xaea2, d5xaeb2, d5xaec2, d5xaed2
      automated match to d3wanb_
  28. Domain(s) for 6h8c:
  29. Domain(s) for 6j04:
    1. 2932795Domain d6j04a_: 6j04 A: [377076]
      automated match to d3vtva_
      complexed with so4; mutant
    2. 2932796Domain d6j04b_: 6j04 B: [377050]
      automated match to d3vtva_
      complexed with so4; mutant
    3. 2932797Domain d6j04c_: 6j04 C: [377070]
      automated match to d3vtva_
      complexed with so4; mutant
    4. 2932798Domain d6j04d_: 6j04 D: [377061]
      automated match to d3vtva_
      complexed with so4; mutant
  30. Domain(s) for 6lan:
  31. Domain(s) for 6tbe:
  32. Domain(s) for 7elg:
  33. Domain(s) for 7lk3:
    1. 2932780Domain d7lk3a1: 7lk3 A:1-117 [403454]
      Other proteins in same PDB: d7lk3a2, d7lk3b2
      automated match to d1v49a_
      complexed with edo
    2. 2932781Domain d7lk3b1: 7lk3 B:1-117 [403458]
      Other proteins in same PDB: d7lk3a2, d7lk3b2
      automated match to d1v49a_
      complexed with edo

More info for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.3 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.3 automated matches: