Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1017615Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1017616Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1018108Family d.15.1.3: GABARAP-like [54253] (4 proteins)
    intracellular membrane trafficking and fusion proteins
  6. 1018130Protein automated matches [190358] (5 species)
    not a true protein

Species:

  1. 1018131Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188724] (1 PDB entry)
  2. 1018136Human (Homo sapiens) [TaxId:9606] [187279] (3 PDB entries)
    1. Domains for 2r2q:
      1. 1018139Domain d2r2qa_: 2r2q A: [167943]
        automated match to d1gnua_
        complexed with mpd, unx
      2. 1018140Domain d2r2qb_: 2r2q B: [167944]
        automated match to d1gnua_
        complexed with mpd, unx
    2. Domains for 2zjd:
      1. 1018137Domain d2zjda_: 2zjd A: [154484]
        automated match to d1v49a_
      2. 1018138Domain d2zjdc_: 2zjd C: [154485]
        automated match to d1v49a_
    3. Domains for 3eci:
      1. 1018141Domain d3ecia_: 3eci A: [174827]
        automated match to d1v49a_
      2. 1018142Domain d3ecib_: 3eci B: [174828]
        automated match to d1v49a_
  3. 1018143Norway rat (Rattus norvegicus) [TaxId:10116] [187189] (3 PDB entries)
    1. Domain for 2z0d:
    2. Domain for 2z0e:
    3. Domain for 2zzp:
  4. 1018147Saccharomyces cerevisiae [TaxId:559292] [189812] (3 PDB entries)
    1. Domain for 3rui:
    2. Domain for 3vh3:
    3. Domain for 3vh4:
  5. 1018151Silkworm (Bombyx mori) [TaxId:7091] [189398] (1 PDB entry)

More info for Protein automated matches from d.15.1.3: GABARAP-like

Timeline for Protein automated matches from d.15.1.3: GABARAP-like: