Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2468413Fold c.62: vWA-like [53299] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
  4. 2468414Superfamily c.62.1: vWA-like [53300] (6 families) (S)
  5. 2468415Family c.62.1.1: Integrin A (or I) domain [53301] (12 protein domains)
  6. 2468566Protein automated matches [190060] (2 species)
    not a true protein

Species:

  1. 2468567Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [346319] (1 PDB entry)
  2. 2468569Human (Homo sapiens) [TaxId:9606] [186779] (13 PDB entries)
    1. Domain for 1u0n:
    2. Domain for 2adf:
    3. Domains for 3hi6:
      1. 2468588Domain d3hi6a_: 3hi6 A: [177600]
        Other proteins in same PDB: d3hi6l1, d3hi6l2, d3hi6y1, d3hi6y2
        automated match to d1cqpa_
        complexed with mn, so4
      2. 2468589Domain d3hi6b_: 3hi6 B: [177601]
        Other proteins in same PDB: d3hi6l1, d3hi6l2, d3hi6y1, d3hi6y2
        automated match to d1cqpa_
        complexed with mn, so4
    4. Domain for 3hxq:
    5. Domains for 3n2n:
      1. 2468570Domain d3n2na1: 3n2n A:38-220 [181839]
        Other proteins in same PDB: d3n2na2, d3n2nb2, d3n2nc2, d3n2nd2, d3n2ne2, d3n2nf2
        automated match to d1shux_
        complexed with act, mg
      2. 2468571Domain d3n2nb1: 3n2n B:38-220 [181840]
        Other proteins in same PDB: d3n2na2, d3n2nb2, d3n2nc2, d3n2nd2, d3n2ne2, d3n2nf2
        automated match to d1shux_
        complexed with act, mg
      3. 2468572Domain d3n2nc1: 3n2n C:38-220 [181841]
        Other proteins in same PDB: d3n2na2, d3n2nb2, d3n2nc2, d3n2nd2, d3n2ne2, d3n2nf2
        automated match to d1shux_
        complexed with act, mg
      4. 2468573Domain d3n2nd1: 3n2n D:38-220 [181842]
        Other proteins in same PDB: d3n2na2, d3n2nb2, d3n2nc2, d3n2nd2, d3n2ne2, d3n2nf2
        automated match to d1shux_
        complexed with act, mg
      5. 2468574Domain d3n2ne1: 3n2n E:38-220 [181843]
        Other proteins in same PDB: d3n2na2, d3n2nb2, d3n2nc2, d3n2nd2, d3n2ne2, d3n2nf2
        automated match to d1shux_
        complexed with act, mg
      6. 2468575Domain d3n2nf1: 3n2n F:38-220 [181844]
        Other proteins in same PDB: d3n2na2, d3n2nb2, d3n2nc2, d3n2nd2, d3n2ne2, d3n2nf2
        automated match to d1shux_
        complexed with act, mg
    6. Domains for 4a0q:
      1. 2468576Domain d4a0qa_: 4a0q A: [186688]
        automated match to d1pt6b_
        complexed with mg; mutant
      2. 2468577Domain d4a0qb_: 4a0q B: [186689]
        automated match to d1pt6b_
        complexed with mg; mutant
    7. Domains for 4bj3:
      1. 2468597Domain d4bj3a_: 4bj3 A: [251265]
        automated match to d1aoxb_
        complexed with btb, cl, mg
      2. 2468598Domain d4bj3b_: 4bj3 B: [251266]
        automated match to d1aoxb_
        complexed with btb, cl, mg
    8. Domains for 4c29:
      1. 2468579Domain d4c29a_: 4c29 A: [235848]
        automated match to d1auqa_
        complexed with act, ca, peg; mutant
      2. 2468580Domain d4c29b_: 4c29 B: [235983]
        automated match to d4c29a_
        complexed with act, ca, peg; mutant
    9. Domain for 4c2a:
    10. Domains for 4c2b:
      1. 2468593Domain d4c2ba_: 4c2b A: [235984]
        Other proteins in same PDB: d4c2bb_, d4c2bd_, d4c2bf_, d4c2bh_
        automated match to d4c29a_
        complexed with mes, peg, so4; mutant
      2. 2468594Domain d4c2bc_: 4c2b C: [235990]
        Other proteins in same PDB: d4c2bb_, d4c2bd_, d4c2bf_, d4c2bh_
        automated match to d4c29a_
        complexed with mes, peg, so4; mutant
      3. 2468595Domain d4c2be_: 4c2b E: [235985]
        Other proteins in same PDB: d4c2bb_, d4c2bd_, d4c2bf_, d4c2bh_
        automated match to d4c29a_
        complexed with mes, peg, so4; mutant
      4. 2468596Domain d4c2bg_: 4c2b G: [235988]
        Other proteins in same PDB: d4c2bb_, d4c2bd_, d4c2bf_, d4c2bh_
        automated match to d4c29a_
        complexed with mes, peg, so4; mutant
    11. Domain for 4m76:
    12. Domains for 5hj2:
      1. 2468582Domain d5hj2a_: 5hj2 A: [332900]
        automated match to d1aoxb_
        complexed with ca, cl, gol, peg, so4
      2. 2468583Domain d5hj2b_: 5hj2 B: [333009]
        automated match to d1aoxb_
        complexed with ca, cl, gol, peg, so4
      3. 2468584Domain d5hj2c_: 5hj2 C: [332892]
        automated match to d1aoxb_
        complexed with ca, cl, gol, peg, so4
      4. 2468585Domain d5hj2d_: 5hj2 D: [332958]
        automated match to d1aoxb_
        complexed with ca, cl, gol, peg, so4
      5. 2468586Domain d5hj2e_: 5hj2 E: [332961]
        automated match to d1aoxb_
        complexed with ca, cl, gol, peg, so4
      6. 2468587Domain d5hj2f_: 5hj2 F: [332910]
        automated match to d1aoxb_
        complexed with ca, cl, gol, peg, so4
    13. Domains for 5thp:
      1. 2468599Domain d5thpc_: 5thp C: [337246]
        Other proteins in same PDB: d5thpa_, d5thpb_, d5thpd_, d5thpe_, d5thpg_, d5thph_, d5thpj_, d5thpk_, d5thpm_, d5thpn_, d5thpp_, d5thpq_
        automated match to d1aoxb_
        complexed with cl, gol, mg, na, so4
      2. 2468600Domain d5thpf_: 5thp F: [337269]
        Other proteins in same PDB: d5thpa_, d5thpb_, d5thpd_, d5thpe_, d5thpg_, d5thph_, d5thpj_, d5thpk_, d5thpm_, d5thpn_, d5thpp_, d5thpq_
        automated match to d1aoxb_
        complexed with cl, gol, mg, na, so4
      3. 2468601Domain d5thpi_: 5thp I: [337243]
        Other proteins in same PDB: d5thpa_, d5thpb_, d5thpd_, d5thpe_, d5thpg_, d5thph_, d5thpj_, d5thpk_, d5thpm_, d5thpn_, d5thpp_, d5thpq_
        automated match to d1aoxb_
        complexed with cl, gol, mg, na, so4
      4. 2468602Domain d5thpl_: 5thp L: [337235]
        Other proteins in same PDB: d5thpa_, d5thpb_, d5thpd_, d5thpe_, d5thpg_, d5thph_, d5thpj_, d5thpk_, d5thpm_, d5thpn_, d5thpp_, d5thpq_
        automated match to d1aoxb_
        complexed with cl, gol, mg, na, so4
      5. 2468603Domain d5thpo_: 5thp O: [337255]
        Other proteins in same PDB: d5thpa_, d5thpb_, d5thpd_, d5thpe_, d5thpg_, d5thph_, d5thpj_, d5thpk_, d5thpm_, d5thpn_, d5thpp_, d5thpq_
        automated match to d1aoxb_
        complexed with cl, gol, mg, na, so4
      6. 2468604Domain d5thpr_: 5thp R: [337258]
        Other proteins in same PDB: d5thpa_, d5thpb_, d5thpd_, d5thpe_, d5thpg_, d5thph_, d5thpj_, d5thpk_, d5thpm_, d5thpn_, d5thpp_, d5thpq_
        automated match to d1aoxb_
        complexed with cl, gol, mg, na, so4

More info for Protein automated matches from c.62.1.1: Integrin A (or I) domain

Timeline for Protein automated matches from c.62.1.1: Integrin A (or I) domain: