SCOPe 2.08: Domain d5ln1a_: 5ln1 A:

Lineage for d5ln1a_ (5ln1 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.62: vWA-like [53299] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

4. Superfamily c.62.1: vWA-like [53300] (6 families)

5. Family c.62.1.1: Integrin A (or I) domain [53301] (12 proteins)

6. Protein automated matches [190060] (2 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [346319] (1 PDB entry)

8. Domain d5ln1a_: 5ln1 A: [344344]
   Other proteins in same PDB: d5ln1u_
   automated match to d4cr2w_

Details for d5ln1a_

PDB Entry: 5ln1, 3.14 Å

PDB Description: structure of ubiquitylated-rpn10 from yeast;

PDB Compounds: (A:) 26s proteasome regulatory subunit rpn10

SCOPe Domain Sequences for d5ln1a_:

Sequence, based on SEQRES records:

>d5ln1a_ c.62.1.1 (A:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
mvleatvlvidnseysrngdfprtrfeaqidsvefifqakrnsnpentvglisgaganpr
vlstftaefgkilaglhdtqiegklhmatalqiaqltlkhrqnkvqhqrivafvcspisd
srdelirlaktlkknnvavdiinfgeieqntelldefiaavnnpqeetshlltvtpgprl
lyeniasspii

Sequence, based on observed residues (ATOM records):

>d5ln1a_ c.62.1.1 (A:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
mvleatvlvidnseysrngdfprtrfeaqidsvefifqakrnsnpentvglisgaganpr
vlstftaefgkilaglhdtqiegklhmatalqiaqltlkhrqnkvqhqrivafvcspisd
srdelirlaktlkknnvavdiinfgeieqlldefiaavnnpqeetshlltvtpgprllye
niasspii

Timeline for d5ln1a_:

• d5ln1a_ first appeared in SCOPe 2.07