Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.211: HD-domain/PDEase-like [109603] (1 superfamily)
    multihelical; consists of two different alpha-helical bundles
  4. Superfamily a.211.1: HD-domain/PDEase-like [109604] (9 families) (S)
  5. Family a.211.1.2: PDEase [48548] (7 proteins)
    Pfam PF00233; multihelical; can be divided into three subdomains
  6. Protein automated matches [190370] (2 species)
    not a true protein

Species:

  1. Human (Homo sapiens) [TaxId:9606] [187208] (27 PDB entries)
    1. Domains for 2qyk:
      1. Domain d2qyka1: 2qyk A:290-622 [167884]
        Other proteins in same PDB: d2qyka2, d2qykb2
        automated match to d1oyna_
        complexed with mg, npv, zn
      2. Domain d2qykb1: 2qyk B:290-622 [167885]
        Other proteins in same PDB: d2qyka2, d2qykb2
        automated match to d1oyna_
        complexed with mg, npv, zn
    2. Domain for 2qym:
    3. Domains for 2yy2:
      1. Domain d2yy2a_: 2yy2 A: [153829]
        automated match to d2hd1a1
        complexed with ibm, mg, zn
      2. Domain d2yy2b_: 2yy2 B: [153830]
        automated match to d2hd1a1
        complexed with ibm, mg, zn
    4. Domains for 3i8v:
      1. Domain d3i8va1: 3i8v A:290-622 [199542]
        Other proteins in same PDB: d3i8va2, d3i8vb2
        automated match to d3i8vb_
        complexed with 0mo, co, gol, mg, zn
      2. Domain d3i8vb1: 3i8v B:290-622 [196548]
        Other proteins in same PDB: d3i8va2, d3i8vb2
        automated match to d2qykb_
        complexed with 0mo, co, gol, mg, zn
    5. Domains for 3jwq:
      1. Domain d3jwqa_: 3jwq A: [199593]
        Other proteins in same PDB: d3jwqc2
        automated match to d3jwrb_
        complexed with mg, via, zn
      2. Domain d3jwqb_: 3jwq B: [199594]
        Other proteins in same PDB: d3jwqc2
        automated match to d3jwrb_
        complexed with mg, via, zn
      3. Domain d3jwqc1: 3jwq C:535-859 [199595]
        Other proteins in same PDB: d3jwqc2
        automated match to d3jwrb_
        complexed with mg, via, zn
      4. Domain d3jwqd_: 3jwq D: [178877]
        Other proteins in same PDB: d3jwqc2
        automated match to d1rkpa_
        complexed with mg, via, zn
    6. Domain for 3jwr:
    7. Domain for 3o0j:
    8. Domains for 3qi3:
      1. Domain d3qi3a_: 3qi3 A: [248898]
        automated match to d2hd1a_
        complexed with mg, pdb, zn
      2. Domain d3qi3b_: 3qi3 B: [248899]
        automated match to d2hd1a_
        complexed with mg, pdb, zn
    9. Domain for 3shy:
    10. Domain for 3shz:
    11. Domains for 3sie:
      1. Domain d3siea_: 3sie A: [193656]
        automated match to d3b2ra_
        complexed with 5bo
      2. Domain d3sieb_: 3sie B: [200667]
        automated match to d3siea_
        complexed with 5bo
    12. Domains for 3tvx:
      1. Domain d3tvxa1: 3tvx A:290-622 [185967]
        Other proteins in same PDB: d3tvxa2, d3tvxb2
        automated match to d1oyna_
        complexed with mg, pnx, so4, zn
      2. Domain d3tvxb1: 3tvx B:290-622 [185968]
        Other proteins in same PDB: d3tvxa2, d3tvxb2
        automated match to d1oyna_
        complexed with mg, pnx, so4, zn
    13. Domain for 4g2w:
    14. Domain for 4g2y:
    15. Domain for 4i9z:
    16. Domain for 4ia0:
    17. Domain for 4myq:
    18. Domain for 4npv:
    19. Domain for 4npw:
    20. Domain for 4nw7:
    21. Domain for 4oew:
    22. Domain for 4oex:
    23. Domains for 5b25:
      1. Domain d5b25a_: 5b25 A: [312597]
        automated match to d1taza_
        complexed with 4qj, gol, mg, so4, zn
      2. Domain d5b25b_: 5b25 B: [312609]
        automated match to d1taza_
        complexed with 4qj, gol, mg, so4, zn
      3. Domain d5b25c_: 5b25 C: [312617]
        automated match to d1taza_
        complexed with 4qj, gol, mg, so4, zn
      4. Domain d5b25d_: 5b25 D: [312636]
        automated match to d1taza_
        complexed with 4qj, gol, mg, so4, zn
    24. Domain for 5uoy:
    25. Domain for 5up0:
    26. Domain for 5w6e:
    27. Domains for 7lrc:
      1. Domain d7lrcb_: 7lrc B: [405528]
        automated match to d1sojb_
        complexed with mg, mn, x5m
      2. Domain d7lrcc_: 7lrc C: [405486]
        automated match to d1sojb_
        complexed with mg, mn, x5m
  2. Blood fluke (Schistosoma mansoni) [TaxId:6183] [361055] (2 PDB entries)
    1. Domains for 6ezu:
      1. Domain d6ezua_: 6ezu A: [361078]
        automated match to d3g58a_
        complexed with amp, cmp, mg, zn
      2. Domain d6ezub_: 6ezu B: [361056]
        automated match to d3g58a_
        complexed with amp, cmp, mg, zn
    2. Domains for 6fg5:
      1. Domain d6fg5a_: 6fg5 A: [363212]
        automated match to d3g58a_
        complexed with mg, zn
      2. Domain d6fg5b_: 6fg5 B: [363264]
        automated match to d3g58a_
        complexed with mg, zn

More info for Protein automated matches from a.211.1.2: PDEase

Timeline for Protein automated matches from a.211.1.2: PDEase: