SCOPe 2.08: Protein: Aminopeptidase P

Lineage for Protein: Aminopeptidase P

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
Superfamily c.55.2: Creatinase/prolidase N-terminal domain [53092] (2 families)
Family c.55.2.1: Creatinase/prolidase N-terminal domain [53093] (3 proteins)
Protein Aminopeptidase P [53096] (2 species)
synonym: Xaa-Pro dipeptidase, prolidase

Species:

Escherichia coli [TaxId:562] [53097] (20 PDB entries)
1. Domain for 1a16:
  - Domain d1a16a1: 1a16 A:1-176 [33548]
    Other proteins in same PDB: d1a16a2
    complexed with leu, mn, pro
2. Domain for 1az9:
  - Domain d1az9a1: 1az9 A:1-176 [302209]
    Other proteins in same PDB: d1az9a2
    automated match to d1n51a1
    complexed with mn
3. Domain for 1jaw:
  - Domain d1jawa1: 1jaw A:1-176 [33549]
    Other proteins in same PDB: d1jawa2
    complexed with act, mn
4. Domains for 1m35:
  1. Domain d1m35a1: 1m35 A:1-176 [84770]
    Other proteins in same PDB: d1m35a2, d1m35b2, d1m35c2, d1m35d2, d1m35e2, d1m35f2
    complexed with mn
  2. Domain d1m35b1: 1m35 B:1-176 [84772]
    Other proteins in same PDB: d1m35a2, d1m35b2, d1m35c2, d1m35d2, d1m35e2, d1m35f2
    complexed with mn
  3. Domain d1m35c1: 1m35 C:1-176 [84774]
    Other proteins in same PDB: d1m35a2, d1m35b2, d1m35c2, d1m35d2, d1m35e2, d1m35f2
    complexed with mn
  4. Domain d1m35d1: 1m35 D:1-176 [84776]
    Other proteins in same PDB: d1m35a2, d1m35b2, d1m35c2, d1m35d2, d1m35e2, d1m35f2
    complexed with mn
  5. Domain d1m35e1: 1m35 E:1-176 [84778]
    Other proteins in same PDB: d1m35a2, d1m35b2, d1m35c2, d1m35d2, d1m35e2, d1m35f2
    complexed with mn
  6. Domain d1m35f1: 1m35 F:1-176 [84780]
    Other proteins in same PDB: d1m35a2, d1m35b2, d1m35c2, d1m35d2, d1m35e2, d1m35f2
    complexed with mn
5. Domain for 1n51:
  - Domain d1n51a1: 1n51 A:1-176 [91678]
    Other proteins in same PDB: d1n51a2
    complexed with mn
6. Domains for 1w2m:
  1. Domain d1w2ma1: 1w2m A:1-176 [120590]
    Other proteins in same PDB: d1w2ma2, d1w2mb2, d1w2mc2, d1w2md2, d1w2me2, d1w2mf2
    automated match to d1n51a1
    complexed with ca, cl, ipa
  2. Domain d1w2mb1: 1w2m B:1-176 [120592]
    Other proteins in same PDB: d1w2ma2, d1w2mb2, d1w2mc2, d1w2md2, d1w2me2, d1w2mf2
    automated match to d1n51a1
    complexed with ca, cl, ipa
  3. Domain d1w2mc1: 1w2m C:1-176 [120594]
    Other proteins in same PDB: d1w2ma2, d1w2mb2, d1w2mc2, d1w2md2, d1w2me2, d1w2mf2
    automated match to d1n51a1
    complexed with ca, cl, ipa
  4. Domain d1w2md1: 1w2m D:1-176 [120596]
    Other proteins in same PDB: d1w2ma2, d1w2mb2, d1w2mc2, d1w2md2, d1w2me2, d1w2mf2
    automated match to d1n51a1
    complexed with ca, cl, ipa
  5. Domain d1w2me1: 1w2m E:1-176 [120598]
    Other proteins in same PDB: d1w2ma2, d1w2mb2, d1w2mc2, d1w2md2, d1w2me2, d1w2mf2
    automated match to d1n51a1
    complexed with ca, cl, ipa
  6. Domain d1w2mf1: 1w2m F:1-176 [120600]
    Other proteins in same PDB: d1w2ma2, d1w2mb2, d1w2mc2, d1w2md2, d1w2me2, d1w2mf2
    automated match to d1n51a1
    complexed with ca, cl, ipa
7. Domains for 1w7v:
  1. Domain d1w7va1: 1w7v A:1-176 [120691]
    Other proteins in same PDB: d1w7va2, d1w7vb2, d1w7vc2, d1w7vd2
    automated match to d1n51a1
    complexed with cl, mg, zn
  2. Domain d1w7vb1: 1w7v B:1-176 [120693]
    Other proteins in same PDB: d1w7va2, d1w7vb2, d1w7vc2, d1w7vd2
    automated match to d1n51a1
    complexed with cl, mg, zn
  3. Domain d1w7vc1: 1w7v C:1-176 [120695]
    Other proteins in same PDB: d1w7va2, d1w7vb2, d1w7vc2, d1w7vd2
    automated match to d1n51a1
    complexed with cl, mg, zn
  4. Domain d1w7vd1: 1w7v D:1-176 [120697]
    Other proteins in same PDB: d1w7va2, d1w7vb2, d1w7vc2, d1w7vd2
    automated match to d1n51a1
    complexed with cl, mg, zn
8. Domains for 1wbq:
  1. Domain d1wbqa1: 1wbq A:1-176 [120852]
    Other proteins in same PDB: d1wbqa2, d1wbqb2, d1wbqc2, d1wbqd2
    automated match to d1n51a1
    complexed with cl, mg, zn
  2. Domain d1wbqb1: 1wbq B:1-176 [120854]
    Other proteins in same PDB: d1wbqa2, d1wbqb2, d1wbqc2, d1wbqd2
    automated match to d1n51a1
    complexed with cl, mg, zn
  3. Domain d1wbqc1: 1wbq C:1-176 [120856]
    Other proteins in same PDB: d1wbqa2, d1wbqb2, d1wbqc2, d1wbqd2
    automated match to d1n51a1
    complexed with cl, mg, zn
  4. Domain d1wbqd1: 1wbq D:1-176 [120858]
    Other proteins in same PDB: d1wbqa2, d1wbqb2, d1wbqc2, d1wbqd2
    automated match to d1n51a1
    complexed with cl, mg, zn
9. Domain for 1wl6:
  - Domain d1wl6a1: 1wl6 A:1-176 [120994]
    Other proteins in same PDB: d1wl6a2
    automated match to d1n51a1
    complexed with cl, ipa, mg, xpe
10. Domain for 1wl9:
  - Domain d1wl9a1: 1wl9 A:1-176 [120998]
    Other proteins in same PDB: d1wl9a2
    automated match to d1n51a1
    complexed with cl, mn
11. Domain for 1wlr:
  - Domain d1wlra1: 1wlr A:1-176 [121011]
    Other proteins in same PDB: d1wlra2
    automated match to d1n51a1
    complexed with cl, ipa, pg4
12. Domain for 2bh3:
  - Domain d2bh3a1: 2bh3 A:1-176 [128514]
    Other proteins in same PDB: d2bh3a2
    automated match to d1n51a1
    complexed with flc, leu, mg, pro, zn
13. Domain for 2bha:
  - Domain d2bhaa1: 2bha A:1-176 [128518]
    Other proteins in same PDB: d2bhaa2
    automated match to d1n51a1
    complexed with flc, mg
14. Domain for 2bhb:
  - Domain d2bhba1: 2bhb A:1-176 [128520]
    Other proteins in same PDB: d2bhba2
    automated match to d1n51a1
    complexed with flc, mg, mrd, zn
15. Domain for 2bhc:
  - Domain d2bhca1: 2bhc A:1-176 [128522]
    Other proteins in same PDB: d2bhca2
    automated match to d1n51a1
    complexed with flc, mg, na
16. Domain for 2bhd:
  - Domain d2bhda1: 2bhd A:1-176 [128524]
    Other proteins in same PDB: d2bhda2
    automated match to d1n51a1
    complexed with flc, mg
17. Domain for 2bn7:
  - Domain d2bn7a1: 2bn7 A:1-176 [128820]
    Other proteins in same PDB: d2bn7a2
    automated match to d1n51a1
    complexed with flc, leu, mg, mn, pro, zn
18. Domain for 2v3x:
  - Domain d2v3xa1: 2v3x A:1-176 [152477]
    Other proteins in same PDB: d2v3xa2
    automatically matched to d1a16a1
    complexed with cl, mn
19. Domain for 2v3y:
  - Domain d2v3ya1: 2v3y A:1-176 [152479]
    Other proteins in same PDB: d2v3ya2
    automatically matched to d1a16a1
    complexed with cl, mn
20. Domain for 2v3z:
  - Domain d2v3za1: 2v3z A:1-176 [152481]
    Other proteins in same PDB: d2v3za2
    automatically matched to d1a16a1
    complexed with cl, mn
Pyrococcus furiosus [TaxId:2261] [102481] (1 PDB entry)
- Domains for 1pv9:
  1. Domain d1pv9a1: 1pv9 A:8-124 [95157]
    Other proteins in same PDB: d1pv9a2, d1pv9b2
    complexed with zn
  2. Domain d1pv9b1: 1pv9 B:4-124 [95159]
    Other proteins in same PDB: d1pv9a2, d1pv9b2
    complexed with zn

More info for Protein Aminopeptidase P from c.55.2.1: Creatinase/prolidase N-terminal domain

Timeline for Protein Aminopeptidase P from c.55.2.1: Creatinase/prolidase N-terminal domain:

Protein Aminopeptidase P from c.55.2.1: Creatinase/prolidase N-terminal domain first appeared (with stable ids) in SCOP 1.55
Protein Aminopeptidase P from c.55.2.1: Creatinase/prolidase N-terminal domain appears in SCOPe 2.07