Species:

1. Bitter gourd (Momordica charantia) [TaxId:3673] [312303] (9 PDB entries)

   1. Domains for 4z8s:

      1. Domain d4z8sb1: 4z8s B:1-132 [312725] Other proteins in same PDB: d4z8sa_ automated match to d4hr6c1 complexed with bma, fuc, gol, nag, xyp

      2. Domain d4z8sb2: 4z8s B:133-261 [312726] Other proteins in same PDB: d4z8sa_ automated match to d4hr6c2 complexed with bma, fuc, gol, nag, xyp

   2. Domains for 4z9w:

      1. Domain d4z9wb1: 4z9w B:1-132 [312353] Other proteins in same PDB: d4z9wa_ automated match to d4hr6c1 complexed with bma, edo, fuc, nag

      2. Domain d4z9wb2: 4z9w B:133-261 [312354] Other proteins in same PDB: d4z9wa_ automated match to d4hr6c2 complexed with bma, edo, fuc, nag

   3. Domains for 4za3:

      1. Domain d4za3b1: 4za3 B:2-132 [312399] Other proteins in same PDB: d4za3a_ automated match to d4hr6c1 complexed with bma, edo, fuc, gol, nag

      2. Domain d4za3b2: 4za3 B:133-261 [312400] Other proteins in same PDB: d4za3a_ automated match to d4hr6c2 complexed with bma, edo, fuc, gol, nag

   4. Domains for 4zbv:

      1. Domain d4zbvb1: 4zbv B:1-132 [312324] Other proteins in same PDB: d4zbva_ automated match to d4hr6c1 complexed with a2g, bma, edo, fuc, gal, mbn, nag, pge, po4

      2. Domain d4zbvb2: 4zbv B:133-261 [312325] Other proteins in same PDB: d4zbva_ automated match to d4hr6c2 complexed with a2g, bma, edo, fuc, gal, mbn, nag, pge, po4

   5. Domains for 4zfu:

      1. Domain d4zfub1: 4zfu B:1-132 [312454] Other proteins in same PDB: d4zfua_ automated match to d4hr6c1 complexed with a2g, bma, fuc, gol, nag, pge, xyp

      2. Domain d4zfub2: 4zfu B:133-261 [312455] Other proteins in same PDB: d4zfua_ automated match to d4hr6c2 complexed with a2g, bma, fuc, gol, nag, pge, xyp

   6. Domains for 4zfw:

      1. Domain d4zfwb1: 4zfw B:1-132 [312304] Other proteins in same PDB: d4zfwa_ automated match to d4hr6c1 complexed with bma, fuc, gal, gla, gol, nag, xyp

      2. Domain d4zfwb2: 4zfw B:133-261 [312305] Other proteins in same PDB: d4zfwa_ automated match to d4hr6c2 complexed with bma, fuc, gal, gla, gol, nag, xyp

   7. Domains for 4zfy:

      1. Domain d4zfyb1: 4zfy B:1-132 [312349] Other proteins in same PDB: d4zfya_ automated match to d4hr6c1 complexed with amg, bma, nag

      2. Domain d4zfyb2: 4zfy B:133-261 [312350] Other proteins in same PDB: d4zfya_ automated match to d4hr6c2 complexed with amg, bma, nag

   8. Domains for 4zgr:

      1. Domain d4zgrb1: 4zgr B:1-132 [312450] Other proteins in same PDB: d4zgra_ automated match to d4hr6c1 complexed with bma, fuc, gal, gol, man, nag, nga, xyp

      2. Domain d4zgrb2: 4zgr B:133-261 [312451] Other proteins in same PDB: d4zgra_ automated match to d4hr6c2 complexed with bma, fuc, gal, gol, man, nag, nga, xyp

   9. Domains for 4zlb:

      1. Domain d4zlbb1: 4zlb B:1-132 [312388] Other proteins in same PDB: d4zlba_ automated match to d4hr6c1 complexed with bma, fuc, lat, nag, xyp

      2. Domain d4zlbb2: 4zlb B:133-261 [312389] Other proteins in same PDB: d4zlba_ automated match to d4hr6c2 complexed with bma, fuc, lat, nag, xyp

2. Castor bean (Ricinus communis) [TaxId:3988] [256065] (1 PDB entry)

   • Domains for 3rtj:

     1. Domain d3rtjb1: 3rtj B:1-135 [239703] Other proteins in same PDB: d3rtja_ automated match to d1hwob1 protein/RNA complex

     2. Domain d3rtjb2: 3rtj B:136-262 [239704] Other proteins in same PDB: d3rtja_ automated match to d1hwob2 protein/RNA complex

3. Clostridium botulinum [TaxId:1491] [254975] (8 PDB entries)

   1. Domains for 1ybi:

      1. Domain d1ybia1: 1ybi A:10-151 [241001] automated match to d2e4ma1

      2. Domain d1ybia2: 1ybi A:152-293 [241002] automated match to d2e4ma2

      3. Domain d1ybib1: 1ybi B:10-151 [241003] automated match to d2e4ma1

      4. Domain d1ybib2: 1ybi B:152-293 [241004] automated match to d2e4ma2

   2. Domains for 4lo0:

      1. Domain d4lo0a1: 4lo0 A:9-151 [253656] Other proteins in same PDB: d4lo0a3, d4lo0b3 automated match to d2e4ma1

      2. Domain d4lo0a2: 4lo0 A:152-293 [253657] Other proteins in same PDB: d4lo0a3, d4lo0b3 automated match to d2e4ma2

      3. Domain d4lo0b1: 4lo0 B:10-151 [253658] Other proteins in same PDB: d4lo0a3, d4lo0b3 automated match to d2e4ma1

      4. Domain d4lo0b2: 4lo0 B:152-293 [253659] Other proteins in same PDB: d4lo0a3, d4lo0b3 automated match to d2e4ma2

   3. Domains for 4lo1:

      1. Domain d4lo1a1: 4lo1 A:9-151 [253660] Other proteins in same PDB: d4lo1a3, d4lo1b3 automated match to d2e4ma1 complexed with gal

      2. Domain d4lo1a2: 4lo1 A:152-293 [253661] Other proteins in same PDB: d4lo1a3, d4lo1b3 automated match to d2e4ma2 complexed with gal

      3. Domain d4lo1b1: 4lo1 B:10-151 [253662] Other proteins in same PDB: d4lo1a3, d4lo1b3 automated match to d2e4ma1 complexed with gal

      4. Domain d4lo1b2: 4lo1 B:152-293 [253663] Other proteins in same PDB: d4lo1a3, d4lo1b3 automated match to d2e4ma2 complexed with gal

   4. Domains for 4lo2:

      1. Domain d4lo2a1: 4lo2 A:9-151 [253664] Other proteins in same PDB: d4lo2a3, d4lo2b3 automated match to d2e4ma1

      2. Domain d4lo2a2: 4lo2 A:152-293 [253665] Other proteins in same PDB: d4lo2a3, d4lo2b3 automated match to d2e4ma2

      3. Domain d4lo2b1: 4lo2 B:9-151 [253666] Other proteins in same PDB: d4lo2a3, d4lo2b3 automated match to d2e4ma1

      4. Domain d4lo2b2: 4lo2 B:152-293 [253667] Other proteins in same PDB: d4lo2a3, d4lo2b3 automated match to d2e4ma2

   5. Domains for 4lo3:

      1. Domain d4lo3a1: 4lo3 A:9-151 [253668] Other proteins in same PDB: d4lo3a3, d4lo3b3 automated match to d2e4ma1

      2. Domain d4lo3a2: 4lo3 A:152-293 [253669] Other proteins in same PDB: d4lo3a3, d4lo3b3 automated match to d2e4ma2

      3. Domain d4lo3b1: 4lo3 B:10-151 [253670] Other proteins in same PDB: d4lo3a3, d4lo3b3 automated match to d2e4ma1

      4. Domain d4lo3b2: 4lo3 B:152-293 [253671] Other proteins in same PDB: d4lo3a3, d4lo3b3 automated match to d2e4ma2

   6. Domains for 4qd2:

      1. Domain d4qd2d2: 4qd2 D:152-293 [257656] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a2 complexed with ca

      2. Domain d4qd2h1: 4qd2 H:9-151 [258345] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

      3. Domain d4qd2h2: 4qd2 H:152-293 [258346] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a2 complexed with ca

      4. Domain d4qd2i1: 4qd2 I:9-151 [263674] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

      5. Domain d4qd2i2: 4qd2 I:152-293 [263675] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a2 complexed with ca

   7. Domains for 5bp5:

      1. Domain d5bp5a1: 5bp5 A:9-151 [276498] Other proteins in same PDB: d5bp5a3, d5bp5b3 automated match to d4lo0a1 complexed with ipt

      2. Domain d5bp5a2: 5bp5 A:152-293 [276500] Other proteins in same PDB: d5bp5a3, d5bp5b3 automated match to d4lo0a2 complexed with ipt

      3. Domain d5bp5b1: 5bp5 B:10-151 [276497] Other proteins in same PDB: d5bp5a3, d5bp5b3 automated match to d4lo0a1 complexed with ipt

      4. Domain d5bp5b2: 5bp5 B:152-293 [276499] Other proteins in same PDB: d5bp5a3, d5bp5b3 automated match to d4lo0a2 complexed with ipt

   8. Domains for 5bqu:

      1. Domain d5bqua1: 5bqu A:10-151 [278009] Other proteins in same PDB: d5bqua3, d5bqub3 automated match to d4lo0a1 complexed with fru, gal

      2. Domain d5bqua2: 5bqu A:152-293 [278010] Other proteins in same PDB: d5bqua3, d5bqub3 automated match to d4lo0a2 complexed with fru, gal

      3. Domain d5bqub1: 5bqu B:10-151 [278012] Other proteins in same PDB: d5bqua3, d5bqub3 automated match to d4lo0a1 complexed with fru, gal

      4. Domain d5bqub2: 5bqu B:152-293 [278014] Other proteins in same PDB: d5bqua3, d5bqub3 automated match to d4lo0a2 complexed with fru, gal

4. Clostridium botulinum [TaxId:441771] [257654] (1 PDB entry)

   • Domains for 4qd2:

     1. Domain d4qd2c1: 4qd2 C:9-151 [257657] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

     2. Domain d4qd2d1: 4qd2 D:9-151 [257655] Other proteins in same PDB: d4qd2c2, d4qd2d3, d4qd2e1, d4qd2e2, d4qd2h3, d4qd2i3, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

5. Clostridium botulinum [TaxId:498213] [257331] (1 PDB entry)

   • Domains for 4ouj:

     1. Domain d4ouja1: 4ouj A:11-153 [257332] automated match to d4lo0a1 complexed with lbt

     2. Domain d4ouja2: 4ouj A:154-294 [257333] automated match to d4lo0a2 complexed with lbt

     3. Domain d4oujb1: 4ouj B:11-153 [263346] automated match to d4lo0a1 complexed with lbt

     4. Domain d4oujb2: 4ouj B:154-294 [263347] automated match to d4lo0a2 complexed with lbt

6. Polyporus squamosus [TaxId:5640] [233243] (2 PDB entries)

   1. Domains for 3phz:

      1. Domain d3phza1: 3phz A:2-148 [233244] Other proteins in same PDB: d3phza2, d3phzb2 automated match to d2ihoa1 complexed with gal, nag, sia

      2. Domain d3phzb1: 3phz B:2-148 [233245] Other proteins in same PDB: d3phza2, d3phzb2 automated match to d2ihoa1 complexed with gal, nag, sia

   2. Domains for 5mua:

      1. Domain d5muaa1: 5mua A:2-148 [336676] Other proteins in same PDB: d5muaa2, d5muab2 automated match to d3phza1 complexed with ca, dms, e64, gal

      2. Domain d5muab1: 5mua B:2-148 [336632] Other proteins in same PDB: d5muaa2, d5muab2 automated match to d3phza1 complexed with ca, dms, e64, gal

7. Sambucus nigra [TaxId:4202] [225559] (8 PDB entries)

   1. Domains for 3c9z:

      1. Domain d3c9za1: 3c9z A:1-128 [208821] automated match to d1onkb1 complexed with act, nag, so4

      2. Domain d3c9za2: 3c9z A:129-257 [208822] automated match to d1onkb2 complexed with act, nag, so4

   2. Domains for 3ca0:

      1. Domain d3ca0a1: 3ca0 A:1-128 [208823] automated match to d1onkb1 complexed with act, so4

      2. Domain d3ca0a2: 3ca0 A:129-257 [208824] automated match to d1onkb2 complexed with act, so4

   3. Domains for 3ca1:

      1. Domain d3ca1a1: 3ca1 A:1-128 [208825] automated match to d1onkb1 complexed with act, gla, nag, so4

      2. Domain d3ca1a2: 3ca1 A:129-257 [208826] automated match to d1onkb2 complexed with act, gla, nag, so4

   4. Domains for 3ca3:

      1. Domain d3ca3a1: 3ca3 A:1-128 [208827] automated match to d1onkb1 complexed with a2g, act, nag, nga, so4

      2. Domain d3ca3a2: 3ca3 A:129-257 [208828] automated match to d1onkb2 complexed with a2g, act, nag, nga, so4

   5. Domains for 3ca4:

      1. Domain d3ca4a1: 3ca4 A:1-128 [208829] automated match to d1onkb1 complexed with act, lat, nag, so4

      2. Domain d3ca4a2: 3ca4 A:129-257 [208830] automated match to d1onkb2 complexed with act, lat, nag, so4

   6. Domains for 3ca5:

      1. Domain d3ca5a1: 3ca5 A:1-128 [208831] automated match to d1onkb1 complexed with act, amg, nag, so4

      2. Domain d3ca5a2: 3ca5 A:129-257 [208832] automated match to d1onkb2 complexed with act, amg, nag, so4

   7. Domains for 3ca6:

      1. Domain d3ca6a1: 3ca6 A:1-128 [208833] automated match to d1onkb1 complexed with a2g, act, nag, ser, so4

      2. Domain d3ca6a2: 3ca6 A:129-257 [208834] automated match to d1onkb2 complexed with a2g, act, nag, ser, so4

   8. Domains for 3cah:

      1. Domain d3caha1: 3cah A:1-128 [208842] automated match to d1onkb1 complexed with act, fca, nag, so4

      2. Domain d3caha2: 3cah A:129-257 [208843] automated match to d1onkb2 complexed with act, fca, nag, so4

8. Streptomyces olivaceoviridis [TaxId:1921] [225151] (7 PDB entries)

   1. Domains for 2d1z:

      1. Domain d2d1za2: 2d1z A:322-436 [203862] Other proteins in same PDB: d2d1za1, d2d1zb1 automated match to d1xyfa1 complexed with gol, so4; mutant

      2. Domain d2d1zb2: 2d1z B:822-936 [203864] Other proteins in same PDB: d2d1za1, d2d1zb1 automated match to d1xyfa1 complexed with gol, so4; mutant

   2. Domains for 2d20:

      1. Domain d2d20a2: 2d20 A:322-436 [203866] Other proteins in same PDB: d2d20a1, d2d20b1 automated match to d1xyfa1 complexed with gol, npo; mutant

      2. Domain d2d20b2: 2d20 B:822-936 [203868] Other proteins in same PDB: d2d20a1, d2d20b1 automated match to d1xyfa1 complexed with gol, npo; mutant

   3. Domains for 2d22:

      1. Domain d2d22a2: 2d22 A:322-436 [203870] Other proteins in same PDB: d2d22a1, d2d22b1 automated match to d1xyfa1 complexed with gol, so4; mutant

      2. Domain d2d22b2: 2d22 B:822-936 [203872] Other proteins in same PDB: d2d22a1, d2d22b1 automated match to d1xyfa1 complexed with gol, so4; mutant

   4. Domains for 2d23:

      1. Domain d2d23a2: 2d23 A:322-436 [203874] Other proteins in same PDB: d2d23a1, d2d23b1 automated match to d1xyfa1 complexed with gol; mutant

      2. Domain d2d23b2: 2d23 B:822-936 [203876] Other proteins in same PDB: d2d23a1, d2d23b1 automated match to d1xyfa1 complexed with gol; mutant

   5. Domains for 2d24:

      1. Domain d2d24a2: 2d24 A:322-436 [203878] Other proteins in same PDB: d2d24a1, d2d24b1 automated match to d1xyfa1 complexed with gol, so4; mutant

      2. Domain d2d24b2: 2d24 B:822-936 [203880] Other proteins in same PDB: d2d24a1, d2d24b1 automated match to d1xyfa1 complexed with gol, so4; mutant

   6. Domains for 5gqd:

      1. Domain d5gqda2: 5gqd A:304-427 [337561] Other proteins in same PDB: d5gqda1, d5gqdb1 automated match to d2d1za2 complexed with gol, xyp, xys; mutant

      2. Domain d5gqdb2: 5gqd B:804-927 [337493] Other proteins in same PDB: d5gqda1, d5gqdb1 automated match to d2d1za2 complexed with gol, xyp, xys; mutant

   7. Domains for 5gqe:

      1. Domain d5gqea2: 5gqe A:311-436 [337483] Other proteins in same PDB: d5gqea1, d5gqeb1 automated match to d2d1za2 complexed with xyp; mutant

      2. Domain d5gqeb2: 5gqe B:811-936 [337479] Other proteins in same PDB: d5gqea1, d5gqeb1 automated match to d2d1za2 complexed with xyp; mutant

9. Trichosanthes anguina [TaxId:50544] [226741] (3 PDB entries)

   1. Domains for 4hr6:

      1. Domain d4hr6c1: 4hr6 C:1-133 [222718] automated match to d1rzob1 complexed with amg

      2. Domain d4hr6c2: 4hr6 C:134-264 [222719] automated match to d1rzob2 complexed with amg

   2. Domains for 5y42:

      1. Domain d5y42c1: 5y42 C:1-133 [355898] automated match to d4hr6c1 complexed with nag

      2. Domain d5y42c2: 5y42 C:134-264 [355899] automated match to d4hr6c2 complexed with nag

      3. Domain d5y42f1: 5y42 F:1-133 [355937] automated match to d4hr6c1 complexed with nag

      4. Domain d5y42f2: 5y42 F:134-264 [355938] automated match to d4hr6c2 complexed with nag

   3. Domains for 5y97:

      1. Domain d5y97c1: 5y97 C:1-133 [356875] automated match to d4hr6c1 complexed with lat, nag

      2. Domain d5y97c2: 5y97 C:134-264 [356876] automated match to d4hr6c2 complexed with lat, nag

More info for Protein automated matches from b.42.2.0: automated matches

Timeline for Protein automated matches from b.42.2.0: automated matches:

• Protein automated matches from b.42.2.0: automated matches first appeared in SCOPe 2.03
  
• Protein automated matches from b.42.2.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from b.42.2.0: automated matches appears in the current release, SCOPe 2.08