PDB entry 3c9z

View 3c9z on RCSB PDB site
Description: Sambucus nigra agglutinin II (SNA-II), tetragonal crystal form
Class: Sugar binding protein, Plant protein
Keywords: BETA-TREFOIL, RICIN-B DOMAIN, GLYCOSYLATION, Glycoprotein, Lectin, SUGAR BINDING PROTEIN, Plant protein
Deposited on 2008-02-19, released 2008-11-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: 0.162
AEROSPACI score: 0.73 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Agglutinin II
    Species: Sambucus nigra
    Database cross-references and differences (RAF-indexed):
    • Uniprot P33183 (0-End)
      • see remark 999 (223)
    Domains in SCOPe 2.07: d3c9za1, d3c9za2
  • Heterogens: NAG, SO4, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3c9zA (A:)
tsftrnivgrdglcvdvrngydtdgtplqlwpcgtqrnqrwtfdsddtirsmgkcmtang
lnngsnivifncstaaenaikwevpidgsiinpssglvmtapraasrtillledniyaas
qgwtvtnnvkpivasivgykemclqsngenngvwmedceatslqqqwalygdrtirvnst
rglcvttngynskdliiilkcqglpsqrwffnsdgaivnpksrlvmdvrasnvslreiii
fpatgnpnqqwvtqvlps

    Sequence, based on observed residues (ATOM records): (download) 
    >3c9zA (A:)
tsftrnivgrdglcvdvrngydtdgtplqlwpcgtqrnqrwtfdsddtirsmgkcmtang
lnngsnivifncstaaenaikwevpidgsiinpssglvmtapraasrtillledniyaas
qgwtvtnnvkpivasivgykemclqsngenngvwmedceatslqqqwalygdrtirvnst
rglcvttngynskdliiilkcqglpsqrwffnsdgaivnpksrlvmdvrasnvslreiii
fpatgnpnqqwvtqvlp