SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
Superfamily c.55.1: Actin-like ATPase domain [53067] (16 families)
duplication contains two domains of this fold
Family c.55.1.1: Actin/HSP70 [53068] (8 proteins)
Protein automated matches [226905] (12 species)
not a true protein

Species:

Acanthamoeba castellanii [TaxId:5755] [226350] (1 PDB entry)
- Domain for 4efh:
  - Domain d4efha2: 4efh A:147-374 [220465]
    Other proteins in same PDB: d4efha1
    automated match to d1c0fa2
    complexed with adp, ca
Chicken (Gallus gallus) [TaxId:9031] [226582] (1 PDB entry)
- Domain for 3w3d:
  - Domain d3w3da2: 3w3d A:146-374 [201269]
    Other proteins in same PDB: d3w3da1, d3w3db_
    automated match to d1d4xa2
    complexed with atp, ca
Cow (Bos taurus) [TaxId:9913] [225259] (3 PDB entries)
1. Domains for 2oan:
  1. Domain d2oana2: 2oan A:147-371 [148707]
    Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
    automated match to d1d4xa2
    complexed with atp, ca, so4
  2. Domain d2oanb2: 2oan B:147-374 [148709]
    Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
    automated match to d1d4xa2
    complexed with atp, ca, so4
  3. Domain d2oanc2: 2oan C:147-371 [148711]
    Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
    automated match to d1d4xa2
    complexed with atp, ca, so4
  4. Domain d2oand2: 2oan D:147-375 [148713]
    Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
    automated match to d1d4xa2
    complexed with atp, ca, so4
2. Domain for 3u4l:
  - Domain d3u4la2: 3u4l A:147-375 [217194]
    Other proteins in same PDB: d3u4la1, d3u4lp_
    automated match to d1d4xa2
    complexed with atp, ca
3. Domain for 4jd2:
  - Domain d4jd2a2: 4jd2 A:161-416 [252891]
    Other proteins in same PDB: d4jd2a1, d4jd2c_, d4jd2d1, d4jd2d2, d4jd2e_, d4jd2f_, d4jd2g_, d4jd2h_
    automated match to d1k8ka2
    complexed with atp, ca, pg4
Dictyostelium discoideum [225500] (2 PDB entries)
1. Domain for 3ci5:
  - Domain d3ci5a2: 3ci5 A:147-375 [199189]
    Other proteins in same PDB: d3ci5a1, d3ci5g_
    automated match to d1d4xa2
    complexed with atp, ca, gol, mg, so4
2. Domain for 3cip:
  - Domain d3cipa2: 3cip A:147-375 [199191]
    Other proteins in same PDB: d3cipa1, d3cipg_
    automated match to d1d4xa2
    complexed with atp, ca, gol, mg, so4
Escherichia coli [TaxId:562] [234029] (1 PDB entry)
- Domains for 4a61:
  1. Domain d4a61a1: 4a61 A:0-157 [234030]
    automated match to d1mwma1
    complexed with anp, mg
  2. Domain d4a61a2: 4a61 A:158-320 [234031]
    automated match to d1mwma2
    complexed with anp, mg
Fruit fly (Drosophila melanogaster) [TaxId:7227] [225128] (12 PDB entries)
1. Domains for 2hf3:
  1. Domain d2hf3a1: 2hf3 A:2-146 [136373]
    automated match to d1d4xa1
    complexed with adp, ca
  2. Domain d2hf3a2: 2hf3 A:147-375 [136374]
    automated match to d1d4xa2
    complexed with adp, ca
2. Domains for 2hf4:
  1. Domain d2hf4a1: 2hf4 A:2-146 [136375]
    automated match to d1d4xa1
    complexed with atp, ca
  2. Domain d2hf4a2: 2hf4 A:147-375 [136376]
    automated match to d1d4xa2
    complexed with atp, ca
3. Domains for 3eks:
  1. Domain d3eksa1: 3eks A:2-146 [209544]
    automated match to d1d4xa1
    complexed with atp, ca, cy9
  2. Domain d3eksa2: 3eks A:147-375 [209545]
    automated match to d1d4xa2
    complexed with atp, ca, cy9
4. Domains for 3eku:
  1. Domain d3ekua1: 3eku A:4-146 [209546]
    automated match to d1d4xa1
    complexed with atp, ca, cy9
  2. Domain d3ekua2: 3eku A:147-375 [209547]
    automated match to d1d4xa2
    complexed with atp, ca, cy9
5. Domains for 3el2:
  1. Domain d3el2a1: 3el2 A:4-146 [209548]
    automated match to d1d4xa1
    complexed with atp, ca
  2. Domain d3el2a2: 3el2 A:147-375 [209549]
    automated match to d1d4xa2
    complexed with atp, ca
6. Domains for 3mmv:
  1. Domain d3mmva1: 3mmv A:5-146 [213458]
    automated match to d1d4xa1
    complexed with atp, ca
  2. Domain d3mmva2: 3mmv A:147-375 [213459]
    automated match to d1d4xa2
    complexed with atp, ca
7. Domains for 3mn6:
  1. Domain d3mn6a1: 3mn6 A:5-146 [213479]
    automated match to d1d4xa1
    complexed with atp, ca
  2. Domain d3mn6a2: 3mn6 A:147-375 [213480]
    automated match to d1d4xa2
    complexed with atp, ca
  3. Domain d3mn6f1: 3mn6 F:5-146 [213481]
    automated match to d1d4xa1
    complexed with atp, ca
  4. Domain d3mn6f2: 3mn6 F:147-375 [213482]
    automated match to d1d4xa2
    complexed with atp, ca
  5. Domain d3mn6k1: 3mn6 K:5-146 [213483]
    automated match to d1d4xa1
    complexed with atp, ca
  6. Domain d3mn6k2: 3mn6 K:147-375 [213484]
    automated match to d1d4xa2
    complexed with atp, ca
8. Domains for 3mn7:
  1. Domain d3mn7a1: 3mn7 A:5-146 [213485]
    automated match to d1d4xa1
    complexed with atp, ca
  2. Domain d3mn7a2: 3mn7 A:147-375 [213486]
    automated match to d1d4xa2
    complexed with atp, ca
9. Domains for 3mn9:
  1. Domain d3mn9a1: 3mn9 A:5-146 [213487]
    automated match to d1d4xa1
    complexed with atp, ca
  2. Domain d3mn9a2: 3mn9 A:147-375 [213488]
    automated match to d1d4xa2
    complexed with atp, ca
10. Domains for 4jhd:
  1. Domain d4jhda2: 4jhd A:147-375 [223819]
    Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
    automated match to d1d4xa2
    complexed with anp, mg
  2. Domain d4jhdb2: 4jhd B:147-375 [223821]
    Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
    automated match to d1d4xa2
    complexed with anp, mg
  3. Domain d4jhdd2: 4jhd D:147-375 [223823]
    Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
    automated match to d1d4xa2
    complexed with anp, mg
  4. Domain d4jhde2: 4jhd E:147-375 [223825]
    Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
    automated match to d1d4xa2
    complexed with anp, mg
11. Domains for 4m63:
  1. Domain d4m63c2: 4m63 C:147-374 [235532]
    Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
    automated match to d4m63e2
    complexed with atp, ca
  2. Domain d4m63d2: 4m63 D:147-374 [228527]
    Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
    automated match to d2btfa2
    complexed with atp, ca
  3. Domain d4m63e2: 4m63 E:147-374 [228525]
    Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
    automated match to d2btfa2
    complexed with atp, ca
12. Domains for 4rwt:
  1. Domain d4rwta2: 4rwt A:147-375 [278145]
    Other proteins in same PDB: d4rwta1, d4rwtb1, d4rwtc_
    automated match to d3ub5a2
    complexed with anp, mg
  2. Domain d4rwtb2: 4rwt B:147-375 [278147]
    Other proteins in same PDB: d4rwta1, d4rwtb1, d4rwtc_
    automated match to d3ub5a2
    complexed with anp, mg
Human (Homo sapiens) [TaxId:9606] [225574] (17 PDB entries)
1. Domains for 2e88:
  1. Domain d2e88a1: 2e88 A:3-188 [146714]
    automated match to d2e8aa1
    complexed with zn
  2. Domain d2e88a2: 2e88 A:189-383 [146715]
    automated match to d2e8aa2
    complexed with zn
2. Domains for 3atu:
  1. Domain d3atua1: 3atu A:4-188 [208366]
    automated match to d2qw9a1
    complexed with adp, mg, na, pg0, po4
  2. Domain d3atua2: 3atu A:189-382 [208367]
    automated match to d1ngfa2
    complexed with adp, mg, na, pg0, po4
3. Domains for 3atv:
  1. Domain d3atva1: 3atv A:3-188 [208368]
    automated match to d2qw9a1
    complexed with adp, cl, k
  2. Domain d3atva2: 3atv A:189-382 [208369]
    automated match to d1ngfa2
    complexed with adp, cl, k
4. Domains for 3ay9:
  1. Domain d3ay9a1: 3ay9 A:4-188 [208430]
    automated match to d2qw9a1
    complexed with adp, ca, cl, k, mg, po4
  2. Domain d3ay9a2: 3ay9 A:189-382 [208431]
    automated match to d1ngfa2
    complexed with adp, ca, cl, k, mg, po4
5. Domains for 3i33:
  1. Domain d3i33a1: 3i33 A:5-189 [211445]
    automated match to d2qw9a1
    complexed with adp, gol, mg, po4
  2. Domain d3i33a2: 3i33 A:190-384 [211446]
    automated match to d1ngfa2
    complexed with adp, gol, mg, po4
6. Domain for 3jxu:
  - Domain d3jxua1: 3jxu A:4-188 [212139]
    Other proteins in same PDB: d3jxua2
    automated match to d2qw9a1
    complexed with adp, mg, po4
7. Domains for 4fsv:
  1. Domain d4fsva1: 4fsv A:4-189 [221502]
    automated match to d1atra1
  2. Domain d4fsva2: 4fsv A:194-387 [221503]
    automated match to d1atra2
8. Domains for 4h5n:
  1. Domain d4h5na1: 4h5n A:3-188 [237790]
    automated match to d2e8aa1
    complexed with cl, gol, na, po4
  2. Domain d4h5na2: 4h5n A:189-384 [237798]
    automated match to d2e8aa2
    complexed with cl, gol, na, po4
  3. Domain d4h5nb1: 4h5n B:3-188 [237792]
    automated match to d2e8aa1
    complexed with cl, gol, na, po4
  4. Domain d4h5nb2: 4h5n B:189-384 [237799]
    automated match to d2e8aa2
    complexed with cl, gol, na, po4
9. Domains for 4h5r:
  1. Domain d4h5ra1: 4h5r A:3-188 [237793]
    automated match to d2e8aa1
    complexed with cl, gol, na, po4, so4
  2. Domain d4h5ra2: 4h5r A:189-384 [237801]
    automated match to d2e8aa2
    complexed with cl, gol, na, po4, so4
  3. Domain d4h5rb1: 4h5r B:3-188 [237794]
    automated match to d2e8aa1
    complexed with cl, gol, na, po4, so4
  4. Domain d4h5rb2: 4h5r B:189-384 [237800]
    automated match to d2e8aa2
    complexed with cl, gol, na, po4, so4
10. Domains for 4h5t:
  1. Domain d4h5ta1: 4h5t A:3-188 [237795]
    automated match to d2e8aa1
    complexed with adp, mg, po4
  2. Domain d4h5ta2: 4h5t A:189-384 [237802]
    automated match to d2e8aa2
    complexed with adp, mg, po4
11. Domains for 4h5v:
  1. Domain d4h5va1: 4h5v A:3-188 [252382]
    automated match to d4h5wb1
    complexed with act, cl, gol, mg, so4
  2. Domain d4h5va2: 4h5v A:189-384 [252383]
    automated match to d4h5wb2
    complexed with act, cl, gol, mg, so4
12. Domains for 4h5w:
  1. Domain d4h5wa1: 4h5w A:3-188 [237791]
    automated match to d2e8aa1
    complexed with act, bet, mg, po4
  2. Domain d4h5wa2: 4h5w A:189-384 [237797]
    automated match to d2e8aa2
    complexed with act, bet, mg, po4
  3. Domain d4h5wb1: 4h5w B:3-188 [237789]
    automated match to d2e8aa1
    complexed with act, bet, mg, po4
  4. Domain d4h5wb2: 4h5w B:189-384 [237796]
    automated match to d2e8aa2
    complexed with act, bet, mg, po4
13. Domains for 4hwi:
  1. Domain d4hwia1: 4hwi A:6-188 [222767]
    automated match to d2qw9a1
  2. Domain d4hwia2: 4hwi A:189-381 [222768]
    automated match to d1ngfa2
14. Domains for 4io8:
  1. Domain d4io8a1: 4io8 A:3-188 [229835]
    automated match to d2e8aa1
    complexed with 3fd
  2. Domain d4io8a2: 4io8 A:189-379 [229840]
    automated match to d2e8aa2
    complexed with 3fd
15. Domains for 5fpd:
  1. Domain d5fpda1: 5fpd A:4-188 [280452]
    automated match to d1atra1
    complexed with pza
  2. Domain d5fpda2: 5fpd A:192-384 [280453]
    automated match to d1atra2
    complexed with pza
  3. Domain d5fpdb1: 5fpd B:4-188 [280454]
    automated match to d1atra1
    complexed with pza
  4. Domain d5fpdb2: 5fpd B:192-384 [280455]
    automated match to d1atra2
    complexed with pza
16. Domains for 5fpe:
  1. Domain d5fpea1: 5fpe A:4-189 [280442]
    automated match to d1atra1
    complexed with 3tr
  2. Domain d5fpea2: 5fpe A:193-385 [280443]
    automated match to d1atra2
    complexed with 3tr
  3. Domain d5fpeb1: 5fpe B:4-188 [280446]
    automated match to d1atra1
    complexed with 3tr
  4. Domain d5fpeb2: 5fpe B:189-385 [280447]
    automated match to d1atra2
    complexed with 3tr
17. Domains for 5fpm:
  1. Domain d5fpma1: 5fpm A:4-190 [280444]
    automated match to d1atra1
    complexed with iwt
  2. Domain d5fpma2: 5fpm A:192-385 [280445]
    automated match to d1atra2
    complexed with iwt
  3. Domain d5fpmb1: 5fpm B:4-190 [280450]
    automated match to d1atra1
    complexed with iwt
  4. Domain d5fpmb2: 5fpm B:193-384 [280451]
    automated match to d1atra2
    complexed with iwt
Malaria parasite (Plasmodium falciparum) [TaxId:5833] [256593] (1 PDB entry)
- Domain for 4cbu:
  - Domain d4cbua2: 4cbu A:148-368 [256594]
    Other proteins in same PDB: d4cbua1, d4cbug_
    automated match to d3ub5a2
    complexed with atp, ca
Mouse (Mus musculus) [TaxId:10090] [225560] (1 PDB entry)
- Domains for 3cqx:
  1. Domain d3cqxa1: 3cqx A:6-188 [208921]
    automated match to d2qw9a1
    complexed with na, scn
  2. Domain d3cqxa2: 3cqx A:189-381 [208922]
    automated match to d1ngfa2
    complexed with na, scn
  3. Domain d3cqxb1: 3cqx B:5-188 [208923]
    automated match to d2qw9a1
    complexed with na, scn
  4. Domain d3cqxb2: 3cqx B:189-381 [208924]
    automated match to d1ngfa2
    complexed with na, scn
Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225126] (9 PDB entries)
1. Domain for 1y64:
  - Domain d1y64a2: 1y64 A:147-372 [122658]
    Other proteins in same PDB: d1y64a1, d1y64b_
    automated match to d1c0fa2
    complexed with atp, ca
2. Domain for 2gwj:
  - Domain d2gwja2: 2gwj A:148-375 [135808]
    Other proteins in same PDB: d2gwja1
    automated match to d1lcua2
    complexed with atp, ca
3. Domains for 2gwk:
  1. Domain d2gwka2: 2gwk A:148-375 [135810]
    Other proteins in same PDB: d2gwka1, d2gwkb1
    automated match to d1lcua2
    complexed with atp, ca
  2. Domain d2gwkb2: 2gwk B:148-375 [135812]
    Other proteins in same PDB: d2gwka1, d2gwkb1
    automated match to d1lcua2
    complexed with atp, ca
4. Domains for 2yje:
  1. Domain d2yjea1: 2yje A:147-372 [244772]
    Other proteins in same PDB: d2yjeb1, d2yjec1
    automated match to d1c0fa2
    complexed with atp, lab, mg
  2. Domain d2yjeb2: 2yje B:147-371 [244774]
    Other proteins in same PDB: d2yjeb1, d2yjec1
    automated match to d1c0fa2
    complexed with atp, lab, mg
  3. Domain d2yjec2: 2yje C:147-371 [244776]
    Other proteins in same PDB: d2yjeb1, d2yjec1
    automated match to d1c0fa2
    complexed with atp, lab, mg
5. Domains for 3ffk:
  1. Domain d3ffkb2: 3ffk B:147-368 [246111]
    Other proteins in same PDB: d3ffka1, d3ffka2, d3ffka3, d3ffkb1, d3ffkd1, d3ffkd2, d3ffkd3, d3ffke1
    automated match to d1c0fa2
    complexed with atp, ca
  2. Domain d3ffke2: 3ffk E:147-370 [246116]
    Other proteins in same PDB: d3ffka1, d3ffka2, d3ffka3, d3ffkb1, d3ffkd1, d3ffkd2, d3ffkd3, d3ffke1
    automated match to d1c0fa2
    complexed with atp, ca
6. Domains for 3m6g:
  1. Domain d3m6ga1: 3m6g A:6-146 [213135]
    automated match to d1lotb1
    complexed with atp, ca, lo3, mg
  2. Domain d3m6ga2: 3m6g A:147-371 [213136]
    automated match to d1lotb2
    complexed with atp, ca, lo3, mg
  3. Domain d3m6gb1: 3m6g B:4-146 [213137]
    automated match to d1lotb1
    complexed with atp, ca, lo3, mg
  4. Domain d3m6gb2: 3m6g B:147-371 [213138]
    automated match to d1lotb2
    complexed with atp, ca, lo3, mg
7. Domain for 3mn5:
  - Domain d3mn5a2: 3mn5 A:147-374 [213478]
    Other proteins in same PDB: d3mn5a1
    automated match to d1d4xa2
    complexed with atp, ca, lab
8. Domain for 3tu5:
  - Domain d3tu5a2: 3tu5 A:147-373 [250034]
    Other proteins in same PDB: d3tu5a1, d3tu5b_
    automated match to d1c0fa2
    complexed with atp, ca, mpd
9. Domain for 4b1y:
  - Domain d4b1yb2: 4b1y B:147-375 [234118]
    Other proteins in same PDB: d4b1yb1
    automated match to d2btfa2
    complexed with 1pe, atp, gol, lab, mg, p6g, peg
Slime mold (Dictyostelium discoideum) [TaxId:44689] [226007] (4 PDB entries)
1. Domain for 3a5l:
  - Domain d3a5lc2: 3a5l C:147-375 [198830]
    Other proteins in same PDB: d3a5lc1, d3a5ls_
    automated match to d1d4xa2
    complexed with adp, ca, mg
2. Domain for 3a5m:
  - Domain d3a5mc2: 3a5m C:147-375 [198832]
    Other proteins in same PDB: d3a5mc1, d3a5ms_
    automated match to d1d4xa2
    complexed with atp, ca, mg
3. Domain for 3a5n:
  - Domain d3a5nc2: 3a5n C:147-375 [198834]
    Other proteins in same PDB: d3a5nc1, d3a5ns_
    automated match to d1d4xa2
    complexed with atp, ca
4. Domain for 3a5o:
  - Domain d3a5oc2: 3a5o C:147-375 [198836]
    Other proteins in same PDB: d3a5oc1, d3a5os_
    automated match to d1d4xa2
    complexed with atp, ca
Spodoptera frugiperda [TaxId:7108] [269617] (1 PDB entry)
- Domain for 4ci6:
  - Domain d4ci6a2: 4ci6 A:147-374 [269618]
    Other proteins in same PDB: d4ci6a1
    automated match to d3ub5a2
    complexed with atp, ca

More info for Protein automated matches from c.55.1.1: Actin/HSP70

Timeline for Protein automated matches from c.55.1.1: Actin/HSP70:

Protein automated matches from c.55.1.1: Actin/HSP70 first appeared in SCOPe 2.03
Protein automated matches from c.55.1.1: Actin/HSP70 appears in SCOPe 2.04
Protein automated matches from c.55.1.1: Actin/HSP70 appears in SCOPe 2.06
Protein automated matches from c.55.1.1: Actin/HSP70 appears in the current release, SCOPe 2.08