Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1605035Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 1605036Superfamily c.55.1: Actin-like ATPase domain [53067] (16 families) (S)
    duplication contains two domains of this fold
  5. 1605037Family c.55.1.1: Actin/HSP70 [53068] (8 proteins)
  6. 1605420Protein automated matches [226905] (11 species)
    not a true protein

Species:

  1. 1605421Acanthamoeba castellanii [TaxId:5755] [226350] (1 PDB entry)
  2. 1605423Chicken (Gallus gallus) [TaxId:9031] [226582] (1 PDB entry)
  3. Cow (Bos taurus) [TaxId:9913] [225259] (3 PDB entries)
    1. Domains for 2oan:
      1. 1605426Domain d2oana2: 2oan A:147-371 [148707]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
      2. 1605427Domain d2oanb2: 2oan B:147-374 [148709]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
      3. 1605428Domain d2oanc2: 2oan C:147-371 [148711]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
      4. 1605429Domain d2oand2: 2oan D:147-375 [148713]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
    2. Domain for 3u4l:
    3. Domain for 4jd2:
  4. 1605432Dictyostelium discoideum [225500] (2 PDB entries)
    1. Domain for 3ci5:
    2. Domain for 3cip:
  5. 1605435Escherichia coli [TaxId:562] [234029] (1 PDB entry)
  6. 1605438Fruit fly (Drosophila melanogaster) [TaxId:7227] [225128] (11 PDB entries)
    1. Domains for 2hf3:
      1. 1605439Domain d2hf3a1: 2hf3 A:2-146 [136373]
        automated match to d1d4xa1
        complexed with adp, ca
      2. 1605440Domain d2hf3a2: 2hf3 A:147-375 [136374]
        automated match to d1d4xa2
        complexed with adp, ca
    2. Domains for 2hf4:
      1. 1605441Domain d2hf4a1: 2hf4 A:2-146 [136375]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1605442Domain d2hf4a2: 2hf4 A:147-375 [136376]
        automated match to d1d4xa2
        complexed with atp, ca
    3. Domains for 3eks:
      1. 1605443Domain d3eksa1: 3eks A:2-146 [209544]
        automated match to d1d4xa1
        complexed with atp, ca, cy9
      2. 1605444Domain d3eksa2: 3eks A:147-375 [209545]
        automated match to d1d4xa2
        complexed with atp, ca, cy9
    4. Domains for 3eku:
      1. 1605455Domain d3ekua1: 3eku A:4-146 [209546]
        automated match to d1d4xa1
        complexed with atp, ca, cy9
      2. 1605456Domain d3ekua2: 3eku A:147-375 [209547]
        automated match to d1d4xa2
        complexed with atp, ca, cy9
    5. Domains for 3el2:
      1. 1605457Domain d3el2a1: 3el2 A:4-146 [209548]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1605458Domain d3el2a2: 3el2 A:147-375 [209549]
        automated match to d1d4xa2
        complexed with atp, ca
    6. Domains for 3mmv:
      1. 1605466Domain d3mmva1: 3mmv A:5-146 [213458]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1605467Domain d3mmva2: 3mmv A:147-375 [213459]
        automated match to d1d4xa2
        complexed with atp, ca
    7. Domains for 3mn6:
      1. 1605447Domain d3mn6a1: 3mn6 A:5-146 [213479]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1605448Domain d3mn6a2: 3mn6 A:147-375 [213480]
        automated match to d1d4xa2
        complexed with atp, ca
      3. 1605449Domain d3mn6f1: 3mn6 F:5-146 [213481]
        automated match to d1d4xa1
        complexed with atp, ca
      4. 1605450Domain d3mn6f2: 3mn6 F:147-375 [213482]
        automated match to d1d4xa2
        complexed with atp, ca
      5. 1605451Domain d3mn6k1: 3mn6 K:5-146 [213483]
        automated match to d1d4xa1
        complexed with atp, ca
      6. 1605452Domain d3mn6k2: 3mn6 K:147-375 [213484]
        automated match to d1d4xa2
        complexed with atp, ca
    8. Domains for 3mn7:
      1. 1605453Domain d3mn7a1: 3mn7 A:5-146 [213485]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1605454Domain d3mn7a2: 3mn7 A:147-375 [213486]
        automated match to d1d4xa2
        complexed with atp, ca
    9. Domains for 3mn9:
      1. 1605445Domain d3mn9a1: 3mn9 A:5-146 [213487]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1605446Domain d3mn9a2: 3mn9 A:147-375 [213488]
        automated match to d1d4xa2
        complexed with atp, ca
    10. Domains for 4jhd:
      1. 1605459Domain d4jhda2: 4jhd A:147-375 [223819]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
      2. 1605460Domain d4jhdb2: 4jhd B:147-375 [223821]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
      3. 1605461Domain d4jhdd2: 4jhd D:147-375 [223823]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
      4. 1605462Domain d4jhde2: 4jhd E:147-375 [223825]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
    11. Domains for 4m63:
      1. 1605463Domain d4m63c2: 4m63 C:147-374 [235532]
        Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
        automated match to d4m63e2
        complexed with atp, ca
      2. 1605464Domain d4m63d2: 4m63 D:147-374 [228527]
        Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
        automated match to d2btfa2
        complexed with atp, ca
      3. 1605465Domain d4m63e2: 4m63 E:147-374 [228525]
        Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
        automated match to d2btfa2
        complexed with atp, ca
  7. 1605468Human (Homo sapiens) [TaxId:9606] [225574] (14 PDB entries)
    1. Domains for 2e88:
      1. 1605479Domain d2e88a1: 2e88 A:3-188 [146714]
        automated match to d2e8aa1
        complexed with zn
      2. 1605480Domain d2e88a2: 2e88 A:189-383 [146715]
        automated match to d2e8aa2
        complexed with zn
    2. Domains for 3atu:
      1. 1605473Domain d3atua1: 3atu A:4-188 [208366]
        automated match to d2qw9a1
        complexed with adp, mg, na, pg0, po4
      2. 1605474Domain d3atua2: 3atu A:189-382 [208367]
        automated match to d1ngfa2
        complexed with adp, mg, na, pg0, po4
    3. Domains for 3atv:
      1. 1605471Domain d3atva1: 3atv A:3-188 [208368]
        automated match to d2qw9a1
        complexed with adp, cl, k
      2. 1605472Domain d3atva2: 3atv A:189-382 [208369]
        automated match to d1ngfa2
        complexed with adp, cl, k
    4. Domains for 3ay9:
      1. 1605477Domain d3ay9a1: 3ay9 A:4-188 [208430]
        automated match to d2qw9a1
        complexed with adp, ca, cl, k, mg, po4
      2. 1605478Domain d3ay9a2: 3ay9 A:189-382 [208431]
        automated match to d1ngfa2
        complexed with adp, ca, cl, k, mg, po4
    5. Domains for 3i33:
      1. 1605469Domain d3i33a1: 3i33 A:5-189 [211445]
        automated match to d2qw9a1
        complexed with adp, gol, mg, po4
      2. 1605470Domain d3i33a2: 3i33 A:190-384 [211446]
        automated match to d1ngfa2
        complexed with adp, gol, mg, po4
    6. Domain for 3jxu:
    7. Domains for 4fsv:
      1. 1605475Domain d4fsva1: 4fsv A:4-189 [221502]
        automated match to d1atra1
      2. 1605476Domain d4fsva2: 4fsv A:194-387 [221503]
        automated match to d1atra2
    8. Domains for 4h5n:
      1. 1605487Domain d4h5na1: 4h5n A:3-188 [237790]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4
      2. 1605488Domain d4h5na2: 4h5n A:189-384 [237798]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4
      3. 1605489Domain d4h5nb1: 4h5n B:3-188 [237792]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4
      4. 1605490Domain d4h5nb2: 4h5n B:189-384 [237799]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4
    9. Domains for 4h5r:
      1. 1605481Domain d4h5ra1: 4h5r A:3-188 [237793]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4, so4
      2. 1605482Domain d4h5ra2: 4h5r A:189-384 [237801]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4, so4
      3. 1605483Domain d4h5rb1: 4h5r B:3-188 [237794]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4, so4
      4. 1605484Domain d4h5rb2: 4h5r B:189-384 [237800]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4, so4
    10. Domains for 4h5t:
      1. 1605498Domain d4h5ta1: 4h5t A:3-188 [237795]
        automated match to d2e8aa1
        complexed with adp, mg, po4
      2. 1605499Domain d4h5ta2: 4h5t A:189-384 [237802]
        automated match to d2e8aa2
        complexed with adp, mg, po4
    11. Domains for 4h5v:
      1. 1605485Domain d4h5va1: 4h5v A:3-188 [252382]
        automated match to d4h5wb1
        complexed with act, cl, gol, mg, so4
      2. 1605486Domain d4h5va2: 4h5v A:189-384 [252383]
        automated match to d4h5wb2
        complexed with act, cl, gol, mg, so4
    12. Domains for 4h5w:
      1. 1605494Domain d4h5wa1: 4h5w A:3-188 [237791]
        automated match to d2e8aa1
        complexed with act, bet, mg, po4
      2. 1605495Domain d4h5wa2: 4h5w A:189-384 [237797]
        automated match to d2e8aa2
        complexed with act, bet, mg, po4
      3. 1605496Domain d4h5wb1: 4h5w B:3-188 [237789]
        automated match to d2e8aa1
        complexed with act, bet, mg, po4
      4. 1605497Domain d4h5wb2: 4h5w B:189-384 [237796]
        automated match to d2e8aa2
        complexed with act, bet, mg, po4
    13. Domains for 4hwi:
      1. 1605491Domain d4hwia1: 4hwi A:6-188 [222767]
        automated match to d2qw9a1
      2. 1605492Domain d4hwia2: 4hwi A:189-381 [222768]
        automated match to d1ngfa2
    14. Domains for 4io8:
      1. 1605500Domain d4io8a1: 4io8 A:3-188 [229835]
        automated match to d2e8aa1
        complexed with 3fd
      2. 1605501Domain d4io8a2: 4io8 A:189-379 [229840]
        automated match to d2e8aa2
        complexed with 3fd
  8. 1605502Mouse (Mus musculus) [TaxId:10090] [225560] (1 PDB entry)
  9. 1605507Plasmodium falciparum [TaxId:5833] [256593] (1 PDB entry)
  10. 1605509Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225126] (9 PDB entries)
    1. Domain for 1y64:
    2. Domain for 2gwj:
    3. Domains for 2gwk:
      1. 1605513Domain d2gwka2: 2gwk A:148-375 [135810]
        Other proteins in same PDB: d2gwka1, d2gwkb1
        automated match to d1lcua2
        complexed with atp, ca
      2. 1605514Domain d2gwkb2: 2gwk B:148-375 [135812]
        Other proteins in same PDB: d2gwka1, d2gwkb1
        automated match to d1lcua2
        complexed with atp, ca
    4. Domains for 2yje:
      1. 1605522Domain d2yjea1: 2yje A:147-372 [244772]
        Other proteins in same PDB: d2yjeb1, d2yjec1
        automated match to d1c0fa2
        complexed with atp, lab, mg
      2. 1605523Domain d2yjeb2: 2yje B:147-371 [244774]
        Other proteins in same PDB: d2yjeb1, d2yjec1
        automated match to d1c0fa2
        complexed with atp, lab, mg
      3. 1605524Domain d2yjec2: 2yje C:147-371 [244776]
        Other proteins in same PDB: d2yjeb1, d2yjec1
        automated match to d1c0fa2
        complexed with atp, lab, mg
    5. Domains for 3ffk:
      1. 1605520Domain d3ffkb2: 3ffk B:147-368 [246111]
        Other proteins in same PDB: d3ffka1, d3ffka2, d3ffka3, d3ffkb1, d3ffkd1, d3ffkd2, d3ffkd3, d3ffke1
        automated match to d1c0fa2
        complexed with atp, ca
      2. 1605521Domain d3ffke2: 3ffk E:147-370 [246116]
        Other proteins in same PDB: d3ffka1, d3ffka2, d3ffka3, d3ffkb1, d3ffkd1, d3ffkd2, d3ffkd3, d3ffke1
        automated match to d1c0fa2
        complexed with atp, ca
    6. Domains for 3m6g:
      1. 1605515Domain d3m6ga1: 3m6g A:6-146 [213135]
        automated match to d1lotb1
        complexed with atp, ca, lo3, mg
      2. 1605516Domain d3m6ga2: 3m6g A:147-371 [213136]
        automated match to d1lotb2
        complexed with atp, ca, lo3, mg
      3. 1605517Domain d3m6gb1: 3m6g B:4-146 [213137]
        automated match to d1lotb1
        complexed with atp, ca, lo3, mg
      4. 1605518Domain d3m6gb2: 3m6g B:147-371 [213138]
        automated match to d1lotb2
        complexed with atp, ca, lo3, mg
    7. Domain for 3mn5:
    8. Domain for 3tu5:
    9. Domain for 4b1y:
  11. 1605526Slime mold (Dictyostelium discoideum) [TaxId:44689] [226007] (4 PDB entries)
    1. Domain for 3a5l:
    2. Domain for 3a5m:
    3. Domain for 3a5n:
    4. Domain for 3a5o:

More info for Protein automated matches from c.55.1.1: Actin/HSP70

Timeline for Protein automated matches from c.55.1.1: Actin/HSP70: