Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1372364Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 1372365Superfamily c.55.1: Actin-like ATPase domain [53067] (15 families) (S)
    duplication contains two domains of this fold
  5. 1372366Family c.55.1.1: Actin/HSP70 [53068] (8 proteins)
  6. 1372729Protein automated matches [226905] (10 species)
    not a true protein

Species:

  1. 1372730Acanthamoeba castellanii [TaxId:5755] [226350] (1 PDB entry)
  2. 1372732Chicken (Gallus gallus) [TaxId:9031] [226582] (1 PDB entry)
  3. Cow (Bos taurus) [TaxId:9913] [225259] (2 PDB entries)
    1. Domains for 2oan:
      1. 1372735Domain d2oana2: 2oan A:147-371 [148707]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
      2. 1372736Domain d2oanb2: 2oan B:147-374 [148709]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
      3. 1372737Domain d2oanc2: 2oan C:147-371 [148711]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
      4. 1372738Domain d2oand2: 2oan D:147-375 [148713]
        Other proteins in same PDB: d2oana1, d2oanb1, d2oanc1, d2oand1
        automated match to d1d4xa2
        complexed with atp, ca, so4
    2. Domain for 3u4l:
  4. 1372740Dictyostelium discoideum [225500] (2 PDB entries)
    1. Domain for 3ci5:
    2. Domain for 3cip:
  5. Escherichia coli [TaxId:562] [234029] (1 PDB entry)
  6. 1372746Fruit fly (Drosophila melanogaster) [TaxId:7227] [225128] (11 PDB entries)
    1. Domains for 2hf3:
      1. 1372747Domain d2hf3a1: 2hf3 A:2-146 [136373]
        automated match to d1d4xa1
        complexed with adp, ca
      2. 1372748Domain d2hf3a2: 2hf3 A:147-375 [136374]
        automated match to d1d4xa2
        complexed with adp, ca
    2. Domains for 2hf4:
      1. 1372749Domain d2hf4a1: 2hf4 A:2-146 [136375]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1372750Domain d2hf4a2: 2hf4 A:147-375 [136376]
        automated match to d1d4xa2
        complexed with atp, ca
    3. Domains for 3eks:
      1. 1372751Domain d3eksa1: 3eks A:2-146 [209544]
        automated match to d1d4xa1
        complexed with atp, ca, cy9
      2. 1372752Domain d3eksa2: 3eks A:147-375 [209545]
        automated match to d1d4xa2
        complexed with atp, ca, cy9
    4. Domains for 3eku:
      1. 1372763Domain d3ekua1: 3eku A:4-146 [209546]
        automated match to d1d4xa1
        complexed with atp, ca, cy9
      2. 1372764Domain d3ekua2: 3eku A:147-375 [209547]
        automated match to d1d4xa2
        complexed with atp, ca, cy9
    5. Domains for 3el2:
      1. 1372765Domain d3el2a1: 3el2 A:4-146 [209548]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1372766Domain d3el2a2: 3el2 A:147-375 [209549]
        automated match to d1d4xa2
        complexed with atp, ca
    6. Domains for 3mmv:
      1. 1372774Domain d3mmva1: 3mmv A:5-146 [213458]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1372775Domain d3mmva2: 3mmv A:147-375 [213459]
        automated match to d1d4xa2
        complexed with atp, ca
    7. Domains for 3mn6:
      1. 1372755Domain d3mn6a1: 3mn6 A:5-146 [213479]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1372756Domain d3mn6a2: 3mn6 A:147-375 [213480]
        automated match to d1d4xa2
        complexed with atp, ca
      3. 1372757Domain d3mn6f1: 3mn6 F:5-146 [213481]
        automated match to d1d4xa1
        complexed with atp, ca
      4. 1372758Domain d3mn6f2: 3mn6 F:147-375 [213482]
        automated match to d1d4xa2
        complexed with atp, ca
      5. 1372759Domain d3mn6k1: 3mn6 K:5-146 [213483]
        automated match to d1d4xa1
        complexed with atp, ca
      6. 1372760Domain d3mn6k2: 3mn6 K:147-375 [213484]
        automated match to d1d4xa2
        complexed with atp, ca
    8. Domains for 3mn7:
      1. 1372761Domain d3mn7a1: 3mn7 A:5-146 [213485]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1372762Domain d3mn7a2: 3mn7 A:147-375 [213486]
        automated match to d1d4xa2
        complexed with atp, ca
    9. Domains for 3mn9:
      1. 1372753Domain d3mn9a1: 3mn9 A:5-146 [213487]
        automated match to d1d4xa1
        complexed with atp, ca
      2. 1372754Domain d3mn9a2: 3mn9 A:147-375 [213488]
        automated match to d1d4xa2
        complexed with atp, ca
    10. Domains for 4jhd:
      1. 1372767Domain d4jhda2: 4jhd A:147-375 [223819]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
      2. 1372768Domain d4jhdb2: 4jhd B:147-375 [223821]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
      3. 1372769Domain d4jhdd2: 4jhd D:147-375 [223823]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
      4. 1372770Domain d4jhde2: 4jhd E:147-375 [223825]
        Other proteins in same PDB: d4jhda1, d4jhdb1, d4jhdd1, d4jhde1
        automated match to d1d4xa2
        complexed with anp, mg
    11. Domains for 4m63:
      1. 1372771Domain d4m63c2: 4m63 C:147-374 [235532]
        Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
        automated match to d4m63e2
        complexed with atp, ca
      2. 1372772Domain d4m63d2: 4m63 D:147-374 [228527]
        Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
        automated match to d2btfa2
        complexed with atp, ca
      3. 1372773Domain d4m63e2: 4m63 E:147-374 [228525]
        Other proteins in same PDB: d4m63c1, d4m63d1, d4m63e1
        automated match to d2btfa2
        complexed with atp, ca
  7. 1372776Human (Homo sapiens) [TaxId:9606] [225574] (12 PDB entries)
    1. Domains for 3atu:
      1. 1372781Domain d3atua1: 3atu A:4-188 [208366]
        automated match to d2qw9a1
        complexed with adp, mg, na, pg0, po4
      2. 1372782Domain d3atua2: 3atu A:189-382 [208367]
        automated match to d1ngfa2
        complexed with adp, mg, na, pg0, po4
    2. Domains for 3atv:
      1. 1372779Domain d3atva1: 3atv A:3-188 [208368]
        automated match to d2qw9a1
        complexed with adp, cl, k
      2. 1372780Domain d3atva2: 3atv A:189-382 [208369]
        automated match to d1ngfa2
        complexed with adp, cl, k
    3. Domains for 3ay9:
      1. 1372785Domain d3ay9a1: 3ay9 A:4-188 [208430]
        automated match to d2qw9a1
        complexed with adp, ca, cl, k, mg, po4
      2. 1372786Domain d3ay9a2: 3ay9 A:189-382 [208431]
        automated match to d1ngfa2
        complexed with adp, ca, cl, k, mg, po4
    4. Domains for 3i33:
      1. 1372777Domain d3i33a1: 3i33 A:5-189 [211445]
        automated match to d2qw9a1
        complexed with adp, gol, mg, po4
      2. 1372778Domain d3i33a2: 3i33 A:190-384 [211446]
        automated match to d1ngfa2
        complexed with adp, gol, mg, po4
    5. Domain for 3jxu:
    6. Domains for 4fsv:
      1. 1372783Domain d4fsva1: 4fsv A:4-189 [221502]
        automated match to d1atra1
      2. 1372784Domain d4fsva2: 4fsv A:194-387 [221503]
        automated match to d1atra2
    7. Domains for 4h5n:
      1. 1372791Domain d4h5na1: 4h5n A:3-188 [237790]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4
      2. 1372792Domain d4h5na2: 4h5n A:189-384 [237798]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4
      3. 1372793Domain d4h5nb1: 4h5n B:3-188 [237792]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4
      4. 1372794Domain d4h5nb2: 4h5n B:189-384 [237799]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4
    8. Domains for 4h5r:
      1. 1372787Domain d4h5ra1: 4h5r A:3-188 [237793]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4, so4
      2. 1372788Domain d4h5ra2: 4h5r A:189-384 [237801]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4, so4
      3. 1372789Domain d4h5rb1: 4h5r B:3-188 [237794]
        automated match to d2e8aa1
        complexed with cl, gol, na, po4, so4
      4. 1372790Domain d4h5rb2: 4h5r B:189-384 [237800]
        automated match to d2e8aa2
        complexed with cl, gol, na, po4, so4
    9. Domains for 4h5t:
      1. 1372802Domain d4h5ta1: 4h5t A:3-188 [237795]
        automated match to d2e8aa1
        complexed with adp, mg, po4
      2. 1372803Domain d4h5ta2: 4h5t A:189-384 [237802]
        automated match to d2e8aa2
        complexed with adp, mg, po4
    10. Domains for 4h5w:
      1. 1372798Domain d4h5wa1: 4h5w A:3-188 [237791]
        automated match to d2e8aa1
        complexed with act, bet, mg, po4
      2. 1372799Domain d4h5wa2: 4h5w A:189-384 [237797]
        automated match to d2e8aa2
        complexed with act, bet, mg, po4
      3. 1372800Domain d4h5wb1: 4h5w B:3-188 [237789]
        automated match to d2e8aa1
        complexed with act, bet, mg, po4
      4. 1372801Domain d4h5wb2: 4h5w B:189-384 [237796]
        automated match to d2e8aa2
        complexed with act, bet, mg, po4
    11. Domains for 4hwi:
      1. 1372795Domain d4hwia1: 4hwi A:6-188 [222767]
        automated match to d2qw9a1
      2. 1372796Domain d4hwia2: 4hwi A:189-381 [222768]
        automated match to d1ngfa2
    12. Domains for 4io8:
      1. 1372804Domain d4io8a1: 4io8 A:3-188 [229835]
        automated match to d2e8aa1
        complexed with 3fd
      2. 1372805Domain d4io8a2: 4io8 A:189-379 [229840]
        automated match to d2e8aa2
        complexed with 3fd
  8. 1372806Mouse (Mus musculus) [TaxId:10090] [225560] (1 PDB entry)
  9. 1372811Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225126] (5 PDB entries)
    1. Domain for 2gwj:
    2. Domains for 2gwk:
      1. 1372815Domain d2gwka2: 2gwk A:148-375 [135810]
        Other proteins in same PDB: d2gwka1, d2gwkb1
        automated match to d1lcua2
        complexed with atp, ca
      2. 1372816Domain d2gwkb2: 2gwk B:148-375 [135812]
        Other proteins in same PDB: d2gwka1, d2gwkb1
        automated match to d1lcua2
        complexed with atp, ca
    3. Domains for 3m6g:
      1. 1372817Domain d3m6ga1: 3m6g A:6-146 [213135]
        automated match to d1lotb1
        complexed with atp, ca, lo3, mg
      2. 1372818Domain d3m6ga2: 3m6g A:147-371 [213136]
        automated match to d1lotb2
        complexed with atp, ca, lo3, mg
      3. 1372819Domain d3m6gb1: 3m6g B:4-146 [213137]
        automated match to d1lotb1
        complexed with atp, ca, lo3, mg
      4. 1372820Domain d3m6gb2: 3m6g B:147-371 [213138]
        automated match to d1lotb2
        complexed with atp, ca, lo3, mg
    4. Domain for 3mn5:
    5. Domain for 4b1y:
  10. 1372821Slime mold (Dictyostelium discoideum) [TaxId:44689] [226007] (4 PDB entries)
    1. Domain for 3a5l:
    2. Domain for 3a5m:
    3. Domain for 3a5n:
    4. Domain for 3a5o:

More info for Protein automated matches from c.55.1.1: Actin/HSP70

Timeline for Protein automated matches from c.55.1.1: Actin/HSP70: