Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1685730Fold d.211: beta-hairpin-alpha-hairpin repeat [74651] (2 superfamilies)
    multiple repeats of beta(2)-alpha(2) motif
  4. 1685731Superfamily d.211.1: Ankyrin repeat [48403] (2 families) (S)
    repeats organized in elongated structures
  5. 1685732Family d.211.1.1: Ankyrin repeat [48404] (18 proteins)
  6. 1685821Protein automated matches [190101] (6 species)
    not a true protein

Species:

  1. 1685822Artificial gene [TaxId:32630] [193962] (5 PDB entries)
    1. Domain for 3hg0:
    2. Domains for 4drx:
      1. 1685824Domain d4drxe_: 4drx E: [219987]
        Other proteins in same PDB: d4drxa1, d4drxa2, d4drxb1, d4drxb2, d4drxc1, d4drxc2, d4drxd1, d4drxd2
        automated match to d4duia_
        complexed with gtp, mg
      2. 1685825Domain d4drxf_: 4drx F: [219988]
        Other proteins in same PDB: d4drxa1, d4drxa2, d4drxb1, d4drxb2, d4drxc1, d4drxc2, d4drxd1, d4drxd2
        automated match to d4duia_
        complexed with gtp, mg
    3. Domain for 4dui:
    4. Domain for 4f6r:
    5. Domain for 4lnu:
  2. 1685829Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186823] (3 PDB entries)
    1. Domain for 1wg0:
    2. Domains for 2dzn:
      1. 1685830Domain d2dzna_: 2dzn A: [146617]
        automated match to d1ixva_
      2. 1685831Domain d2dznc_: 2dzn C: [146618]
        automated match to d1ixva_
      3. 1685832Domain d2dzne_: 2dzn E: [146619]
        automated match to d1ixva_
    3. Domains for 2dzo:
      1. 1685834Domain d2dzoa_: 2dzo A: [146620]
        automated match to d2dznc_
      2. 1685835Domain d2dzoc_: 2dzo C: [146621]
        automated match to d2dznc_
  3. 1685836Escherichia coli [TaxId:562] [189927] (3 PDB entries)
    1. Domains for 3q9n:
      1. 1685839Domain d3q9nc_: 3q9n C: [184292]
        Other proteins in same PDB: d3q9na_, d3q9nb_
        automated match to d1awcb_
        complexed with cms, coa
      2. 1685840Domain d3q9nd_: 3q9n D: [184293]
        Other proteins in same PDB: d3q9na_, d3q9nb_
        automated match to d1awcb_
        complexed with cms, coa
    2. Domains for 3q9u:
      1. 1685841Domain d3q9uc_: 3q9u C: [184296]
        Other proteins in same PDB: d3q9ua_, d3q9ub_
        automated match to d1awcb_
        complexed with coa
      2. 1685842Domain d3q9ud_: 3q9u D: [184297]
        Other proteins in same PDB: d3q9ua_, d3q9ub_
        automated match to d1awcb_
        complexed with coa
    3. Domains for 4k5c:
      1. 1685837Domain d4k5ca_: 4k5c A: [228954]
        automated match to d4duia_
      2. 1685838Domain d4k5cb_: 4k5c B: [228958]
        automated match to d4duia_
  4. 1685843Human (Homo sapiens) [TaxId:9606] [187689] (7 PDB entries)
    1. Domains for 1yyh:
      1. 1685846Domain d1yyha_: 1yyh A: [241086]
        automated match to d2f8ya_
      2. 1685847Domain d1yyhb_: 1yyh B: [241087]
        automated match to d2f8ya_
    2. Domains for 2f8y:
      1. 1685844Domain d2f8ya_: 2f8y A: [164284]
        automated match to d1ot8a_
        complexed with so4
      2. 1685845Domain d2f8yb_: 2f8y B: [164285]
        automated match to d1ot8a_
        complexed with so4
    3. Domains for 2he0:
      1. 1685848Domain d2he0a_: 2he0 A: [242026]
        automated match to d2f8yb_
        complexed with edo; mutant
      2. 1685849Domain d2he0b_: 2he0 B: [242027]
        automated match to d2f8yb_
        complexed with edo; mutant
    4. Domain for 3aaa:
    5. Domain for 3b7b:
    6. Domains for 3c5r:
      1. 1685850Domain d3c5ra_: 3c5r A: [155949]
        automated match to d3hg0d_
      2. 1685851Domain d3c5rb_: 3c5r B: [239170]
        automated match to d3hg0d_
    7. Domains for 4a63:
      1. 1685853Domain d4a63b1: 4a63 B:920-1055 [234034]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      2. 1685854Domain d4a63d1: 4a63 D:925-1055 [234036]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      3. 1685855Domain d4a63f1: 4a63 F:925-1055 [234032]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      4. 1685856Domain d4a63h1: 4a63 H:923-1055 [234040]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      5. 1685857Domain d4a63j1: 4a63 J:923-1055 [234038]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      6. 1685858Domain d4a63l1: 4a63 L:925-1055 [239964]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_, d4a63l2
        automated match to d4a63f1
        complexed with act, zn
  5. 1685860Mouse (Mus musculus) [TaxId:10090] [187645] (3 PDB entries)
    1. Domains for 1ymp:
      1. 1685865Domain d1ympa_: 1ymp A: [241046]
        automated match to d3hg0d_
      2. 1685866Domain d1ympb_: 1ymp B: [241047]
        automated match to d3hg0d_
    2. Domains for 2dwz:
      1. 1685863Domain d2dwza_: 2dwz A: [163731]
        automated match to d1tr4a_
        complexed with epe
      2. 1685864Domain d2dwzc_: 2dwz C: [163732]
        automated match to d1tr4a_
        complexed with epe
    3. Domains for 2qc9:
      1. 1685861Domain d2qc9a_: 2qc9 A: [167517]
        automated match to d1ot8a_
      2. 1685862Domain d2qc9b_: 2qc9 B: [167518]
        automated match to d1ot8a_
  6. 1685867Thale cress (Arabidopsis thaliana) [TaxId:3702] [161332] (2 PDB entries)
    1. Domain for 3deo:
    2. Domain for 3dep:

More info for Protein automated matches from d.211.1.1: Ankyrin repeat

Timeline for Protein automated matches from d.211.1.1: Ankyrin repeat: