Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2563231Fold d.211: beta-hairpin-alpha-hairpin repeat [74651] (2 superfamilies)
    multiple repeats of beta(2)-alpha(2) motif
  4. 2563232Superfamily d.211.1: Ankyrin repeat [48403] (2 families) (S)
    repeats organized in elongated structures
  5. 2563233Family d.211.1.1: Ankyrin repeat [48404] (19 proteins)
  6. 2563325Protein automated matches [190101] (7 species)
    not a true protein

Species:

  1. 2563326Artificial gene [TaxId:32630] [193962] (5 PDB entries)
    1. Domain for 3hg0:
    2. Domains for 4drx:
      1. 2563328Domain d4drxe_: 4drx E: [219987]
        Other proteins in same PDB: d4drxa1, d4drxa2, d4drxb1, d4drxb2, d4drxc1, d4drxc2, d4drxd1, d4drxd2
        automated match to d4duia_
        complexed with gtp, mg
      2. 2563329Domain d4drxf_: 4drx F: [219988]
        Other proteins in same PDB: d4drxa1, d4drxa2, d4drxb1, d4drxb2, d4drxc1, d4drxc2, d4drxd1, d4drxd2
        automated match to d4duia_
        complexed with gtp, mg
    3. Domain for 4dui:
    4. Domain for 4f6r:
    5. Domain for 4lnu:
  2. 2563333Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186823] (3 PDB entries)
    1. Domain for 1wg0:
    2. Domains for 2dzn:
      1. 2563334Domain d2dzna_: 2dzn A: [146617]
        automated match to d1ixva_
      2. 2563335Domain d2dznc_: 2dzn C: [146618]
        automated match to d1ixva_
      3. 2563336Domain d2dzne_: 2dzn E: [146619]
        automated match to d1ixva_
    3. Domains for 2dzo:
      1. 2563338Domain d2dzoa_: 2dzo A: [146620]
        automated match to d2dznc_
      2. 2563339Domain d2dzoc_: 2dzo C: [146621]
        automated match to d2dznc_
  3. 2563340Escherichia coli [TaxId:562] [189927] (3 PDB entries)
    1. Domains for 3q9n:
      1. 2563343Domain d3q9nc_: 3q9n C: [184292]
        Other proteins in same PDB: d3q9na_, d3q9nb_
        automated match to d1awcb_
        complexed with cms, coa
      2. 2563344Domain d3q9nd_: 3q9n D: [184293]
        Other proteins in same PDB: d3q9na_, d3q9nb_
        automated match to d1awcb_
        complexed with cms, coa
    2. Domains for 3q9u:
      1. 2563345Domain d3q9uc_: 3q9u C: [184296]
        Other proteins in same PDB: d3q9ua_, d3q9ub_
        automated match to d1awcb_
        complexed with coa
      2. 2563346Domain d3q9ud_: 3q9u D: [184297]
        Other proteins in same PDB: d3q9ua_, d3q9ub_
        automated match to d1awcb_
        complexed with coa
    3. Domains for 4k5c:
      1. 2563341Domain d4k5ca_: 4k5c A: [228954]
        automated match to d4duia_
      2. 2563342Domain d4k5cb_: 4k5c B: [228958]
        automated match to d4duia_
  4. 2563347Human (Homo sapiens) [TaxId:9606] [187689] (11 PDB entries)
    1. Domains for 1yyh:
      1. 2563350Domain d1yyha1: 1yyh A:52-243 [241086]
        Other proteins in same PDB: d1yyha2
        automated match to d2f8ya_
      2. 2563351Domain d1yyhb_: 1yyh B: [241087]
        Other proteins in same PDB: d1yyha2
        automated match to d2f8ya_
    2. Domains for 2f8y:
      1. 2563348Domain d2f8ya_: 2f8y A: [164284]
        automated match to d1ot8a_
        complexed with so4
      2. 2563349Domain d2f8yb_: 2f8y B: [164285]
        automated match to d1ot8a_
        complexed with so4
    3. Domains for 2he0:
      1. 2563352Domain d2he0a1: 2he0 A:50-243 [242026]
        Other proteins in same PDB: d2he0a2, d2he0b2
        automated match to d2f8yb_
        complexed with edo; mutant
      2. 2563353Domain d2he0b1: 2he0 B:52-243 [242027]
        Other proteins in same PDB: d2he0a2, d2he0b2
        automated match to d2f8yb_
        complexed with edo; mutant
    4. Domain for 3aaa:
    5. Domains for 3c5r:
      1. 2563354Domain d3c5ra2: 3c5r A:425-546 [155949]
        Other proteins in same PDB: d3c5ra3, d3c5rb2
        automated match to d3hg0d_
      2. 2563355Domain d3c5rb1: 3c5r B:425-545 [239170]
        Other proteins in same PDB: d3c5ra3, d3c5rb2
        automated match to d3hg0d_
    6. Domains for 4a63:
      1. 2563358Domain d4a63b1: 4a63 B:920-1055 [234034]
        Other proteins in same PDB: d4a63a1, d4a63a2, d4a63b2, d4a63c1, d4a63c2, d4a63d2, d4a63e1, d4a63e2, d4a63f2, d4a63g1, d4a63g2, d4a63h2, d4a63i1, d4a63i2, d4a63j2, d4a63k1, d4a63k2, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      2. 2563359Domain d4a63d1: 4a63 D:925-1055 [234036]
        Other proteins in same PDB: d4a63a1, d4a63a2, d4a63b2, d4a63c1, d4a63c2, d4a63d2, d4a63e1, d4a63e2, d4a63f2, d4a63g1, d4a63g2, d4a63h2, d4a63i1, d4a63i2, d4a63j2, d4a63k1, d4a63k2, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      3. 2563360Domain d4a63f1: 4a63 F:925-1055 [234032]
        Other proteins in same PDB: d4a63a1, d4a63a2, d4a63b2, d4a63c1, d4a63c2, d4a63d2, d4a63e1, d4a63e2, d4a63f2, d4a63g1, d4a63g2, d4a63h2, d4a63i1, d4a63i2, d4a63j2, d4a63k1, d4a63k2, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      4. 2563361Domain d4a63h1: 4a63 H:923-1055 [234040]
        Other proteins in same PDB: d4a63a1, d4a63a2, d4a63b2, d4a63c1, d4a63c2, d4a63d2, d4a63e1, d4a63e2, d4a63f2, d4a63g1, d4a63g2, d4a63h2, d4a63i1, d4a63i2, d4a63j2, d4a63k1, d4a63k2, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      5. 2563362Domain d4a63j1: 4a63 J:923-1055 [234038]
        Other proteins in same PDB: d4a63a1, d4a63a2, d4a63b2, d4a63c1, d4a63c2, d4a63d2, d4a63e1, d4a63e2, d4a63f2, d4a63g1, d4a63g2, d4a63h2, d4a63i1, d4a63i2, d4a63j2, d4a63k1, d4a63k2, d4a63l2
        automated match to d1ycsb1
        complexed with act, zn
      6. 2563363Domain d4a63l1: 4a63 L:925-1055 [239964]
        Other proteins in same PDB: d4a63a1, d4a63a2, d4a63b2, d4a63c1, d4a63c2, d4a63d2, d4a63e1, d4a63e2, d4a63f2, d4a63g1, d4a63g2, d4a63h2, d4a63i1, d4a63i2, d4a63j2, d4a63k1, d4a63k2, d4a63l2
        automated match to d4a63f1
        complexed with act, zn
    7. Domain for 4zfh:
    8. Domain for 5o2t:
    9. Domains for 6ghm:
      1. 3065217Domain d6ghmd1: 6ghm D:920-1055 [365279]
        Other proteins in same PDB: d6ghmc2, d6ghmd2
        automated match to d4a63d1
        complexed with edo, gol, mn, nhe
      2. 3065257Domain d6ghmc1: 6ghm C:920-1055 [365319]
        Other proteins in same PDB: d6ghmc2, d6ghmd2
        automated match to d4a63d1
        complexed with edo, gol, mn, nhe
    10. Domain for 6h46:
    11. Domain for 6h47:
  5. 2563365Mouse (Mus musculus) [TaxId:10090] [187645] (3 PDB entries)
    1. Domains for 1ymp:
      1. 2563370Domain d1ympa_: 1ymp A: [241046]
        automated match to d3hg0d_
      2. 2563371Domain d1ympb_: 1ymp B: [241047]
        automated match to d3hg0d_
    2. Domains for 2dwz:
      1. 2563368Domain d2dwza_: 2dwz A: [163731]
        automated match to d1tr4a_
        complexed with epe
      2. 2563369Domain d2dwzc_: 2dwz C: [163732]
        automated match to d1tr4a_
        complexed with epe
    3. Domains for 2qc9:
      1. 2563366Domain d2qc9a_: 2qc9 A: [167517]
        automated match to d1ot8a_
      2. 2563367Domain d2qc9b_: 2qc9 B: [167518]
        automated match to d1ot8a_
  6. 2563372Ribosome display [TaxId:248461] [316617] (1 PDB entry)
  7. 2563376Thale cress (Arabidopsis thaliana) [TaxId:3702] [161332] (2 PDB entries)
    1. Domain for 3deo:
    2. Domain for 3dep:

More info for Protein automated matches from d.211.1.1: Ankyrin repeat

Timeline for Protein automated matches from d.211.1.1: Ankyrin repeat: