Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1445942Fold d.211: beta-hairpin-alpha-hairpin repeat [74651] (2 superfamilies)
    multiple repeats of beta(2)-alpha(2) motif
  4. 1445943Superfamily d.211.1: Ankyrin repeat [48403] (2 families) (S)
    repeats organized in elongated structures
  5. 1445944Family d.211.1.1: Ankyrin repeat [48404] (18 proteins)
  6. 1446033Protein automated matches [190101] (6 species)
    not a true protein

Species:

  1. 1446034Artificial gene [TaxId:32630] [193962] (4 PDB entries)
    1. Domain for 3hg0:
    2. Domains for 4drx:
      1. 1446036Domain d4drxe_: 4drx E: [219987]
        Other proteins in same PDB: d4drxa1, d4drxa2, d4drxb1, d4drxb2, d4drxc1, d4drxc2, d4drxd1, d4drxd2
        automated match to d4duia_
        complexed with gtp, mg
      2. 1446037Domain d4drxf_: 4drx F: [219988]
        Other proteins in same PDB: d4drxa1, d4drxa2, d4drxb1, d4drxb2, d4drxc1, d4drxc2, d4drxd1, d4drxd2
        automated match to d4duia_
        complexed with gtp, mg
    3. Domain for 4dui:
    4. Domain for 4f6r:
  2. 1446040Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186823] (2 PDB entries)
    1. Domain for 1wg0:
    2. Domains for 2dzn:
      1. 1446041Domain d2dzna_: 2dzn A: [146617]
        automated match to d1ixva_
      2. 1446042Domain d2dznc_: 2dzn C: [146618]
        automated match to d1ixva_
      3. 1446043Domain d2dzne_: 2dzn E: [146619]
        automated match to d1ixva_
  3. 1446045Escherichia coli [TaxId:562] [189927] (3 PDB entries)
    1. Domains for 3q9n:
      1. 1446048Domain d3q9nc_: 3q9n C: [184292]
        Other proteins in same PDB: d3q9na_, d3q9nb_
        automated match to d1awcb_
        complexed with cms, coa
      2. 1446049Domain d3q9nd_: 3q9n D: [184293]
        Other proteins in same PDB: d3q9na_, d3q9nb_
        automated match to d1awcb_
        complexed with cms, coa
    2. Domains for 3q9u:
      1. 1446050Domain d3q9uc_: 3q9u C: [184296]
        Other proteins in same PDB: d3q9ua_, d3q9ub_
        automated match to d1awcb_
        complexed with coa
      2. 1446051Domain d3q9ud_: 3q9u D: [184297]
        Other proteins in same PDB: d3q9ua_, d3q9ub_
        automated match to d1awcb_
        complexed with coa
    3. Domains for 4k5c:
      1. 1446046Domain d4k5ca_: 4k5c A: [228954]
        automated match to d4duia_
      2. 1446047Domain d4k5cb_: 4k5c B: [228958]
        automated match to d4duia_
  4. 1446052Human (Homo sapiens) [TaxId:9606] [187689] (5 PDB entries)
    1. Domains for 2f8y:
      1. 1446053Domain d2f8ya_: 2f8y A: [164284]
        automated match to d1ot8a_
        complexed with so4
      2. 1446054Domain d2f8yb_: 2f8y B: [164285]
        automated match to d1ot8a_
        complexed with so4
    2. Domain for 3aaa:
    3. Domain for 3b7b:
    4. Domain for 3c5r:
    5. Domains for 4a63:
      1. 1446057Domain d4a63b1: 4a63 B:920-1055 [234034]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_
        automated match to d1ycsb1
        complexed with act, zn
      2. 1446058Domain d4a63d1: 4a63 D:925-1055 [234036]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_
        automated match to d1ycsb1
        complexed with act, zn
      3. 1446059Domain d4a63f1: 4a63 F:925-1055 [234032]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_
        automated match to d1ycsb1
        complexed with act, zn
      4. 1446060Domain d4a63h1: 4a63 H:923-1055 [234040]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_
        automated match to d1ycsb1
        complexed with act, zn
      5. 1446061Domain d4a63j1: 4a63 J:923-1055 [234038]
        Other proteins in same PDB: d4a63a_, d4a63b2, d4a63c_, d4a63d2, d4a63e_, d4a63f2, d4a63g_, d4a63h2, d4a63i_, d4a63j2, d4a63k_
        automated match to d1ycsb1
        complexed with act, zn
  5. 1446063Mouse (Mus musculus) [TaxId:10090] [187645] (2 PDB entries)
    1. Domains for 2dwz:
      1. 1446066Domain d2dwza_: 2dwz A: [163731]
        automated match to d1tr4a_
        complexed with epe
      2. 1446067Domain d2dwzc_: 2dwz C: [163732]
        automated match to d1tr4a_
        complexed with epe
    2. Domains for 2qc9:
      1. 1446064Domain d2qc9a_: 2qc9 A: [167517]
        automated match to d1ot8a_
      2. 1446065Domain d2qc9b_: 2qc9 B: [167518]
        automated match to d1ot8a_
  6. 1446068Thale cress (Arabidopsis thaliana) [TaxId:3702] [161332] (2 PDB entries)
    1. Domain for 3deo:
    2. Domain for 3dep:

More info for Protein automated matches from d.211.1.1: Ankyrin repeat

Timeline for Protein automated matches from d.211.1.1: Ankyrin repeat: