SCOPe 2.08: Protein: Restriction endonuclease EcoRV

Lineage for Protein: Restriction endonuclease EcoRV

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)
Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)
automatically mapped to Pfam PF09233
Protein Restriction endonuclease EcoRV [52985] (1 species)

Species:

Escherichia coli [TaxId:562] [52986] (30 PDB entries)
1. Domains for 1az0:
  1. Domain d1az0a_: 1az0 A: [33248]
    protein/DNA complex; complexed with ca
  2. Domain d1az0b_: 1az0 B: [33249]
    protein/DNA complex; complexed with ca
2. Domains for 1az3:
  1. Domain d1az3a_: 1az3 A: [33276]
  2. Domain d1az3b_: 1az3 B: [33277]
3. Domains for 1az4:
  1. Domain d1az4a_: 1az4 A: [33278]
    mutant
  2. Domain d1az4b_: 1az4 B: [33279]
    mutant
4. Domains for 1b94:
  1. Domain d1b94a_: 1b94 A: [33250]
    protein/DNA complex; complexed with ca
  2. Domain d1b94b_: 1b94 B: [33251]
    protein/DNA complex; complexed with ca
5. Domains for 1b95:
  1. Domain d1b95a_: 1b95 A: [33264]
    protein/DNA complex; mutant
  2. Domain d1b95b_: 1b95 B: [33265]
    protein/DNA complex; mutant
6. Domains for 1b96:
  1. Domain d1b96a_: 1b96 A: [33268]
    protein/DNA complex; mutant
  2. Domain d1b96b_: 1b96 B: [33269]
    protein/DNA complex; mutant
7. Domains for 1b97:
  1. Domain d1b97a_: 1b97 A: [33252]
    protein/DNA complex; mutant
  2. Domain d1b97b_: 1b97 B: [33253]
    protein/DNA complex; mutant
8. Domains for 1bgb:
  1. Domain d1bgba_: 1bgb A: [33254]
    protein/DNA complex
  2. Domain d1bgbb_: 1bgb B: [33255]
    protein/DNA complex
9. Domains for 1bss:
  1. Domain d1bssa_: 1bss A: [33256]
    protein/DNA complex; complexed with ca
  2. Domain d1bssb_: 1bss B: [33257]
    protein/DNA complex; complexed with ca
10. Domains for 1bsu:
  1. Domain d1bsua_: 1bsu A: [33258]
    protein/DNA complex; complexed with ca
  2. Domain d1bsub_: 1bsu B: [33259]
    protein/DNA complex; complexed with ca
11. Domains for 1bua:
  1. Domain d1buaa_: 1bua A: [33266]
    protein/DNA complex
  2. Domain d1buab_: 1bua B: [33267]
    protein/DNA complex
12. Domains for 1eo3:
  1. Domain d1eo3a_: 1eo3 A: [33260]
    protein/DNA complex; complexed with acy, mg
  2. Domain d1eo3b_: 1eo3 B: [33261]
    protein/DNA complex; complexed with acy, mg
13. Domains for 1eo4:
  1. Domain d1eo4a_: 1eo4 A: [33246]
    protein/DNA complex; complexed with acy, mn
  2. Domain d1eo4b_: 1eo4 B: [33247]
    protein/DNA complex; complexed with acy, mn
14. Domains for 1eon:
  1. Domain d1eona_: 1eon A: [33238]
    protein/DNA complex; complexed with acy, cl
  2. Domain d1eonb_: 1eon B: [33239]
    protein/DNA complex; complexed with acy, cl
15. Domains for 1eoo:
  1. Domain d1eooa_: 1eoo A: [33270]
    protein/DNA complex
  2. Domain d1eoob_: 1eoo B: [33271]
    protein/DNA complex
16. Domains for 1eop:
  1. Domain d1eopa_: 1eop A: [33272]
    protein/DNA complex
  2. Domain d1eopb_: 1eop B: [33273]
    protein/DNA complex
17. Domains for 1rv5:
  1. Domain d1rv5a_: 1rv5 A: [33262]
    protein/DNA complex
  2. Domain d1rv5b_: 1rv5 B: [33263]
    protein/DNA complex
18. Domains for 1rva:
  1. Domain d1rvaa_: 1rva A: [33240]
    protein/DNA complex
  2. Domain d1rvab_: 1rva B: [33241]
    protein/DNA complex
19. Domains for 1rvb:
  1. Domain d1rvba_: 1rvb A: [33244]
    protein/DNA complex; complexed with mg
  2. Domain d1rvbb_: 1rvb B: [33245]
    protein/DNA complex; complexed with mg
20. Domains for 1rvc:
  1. Domain d1rvca_: 1rvc A: [33242]
    protein/DNA complex; complexed with mg
  2. Domain d1rvcb_: 1rvc B: [33243]
    protein/DNA complex; complexed with mg
21. Domains for 1rve:
  1. Domain d1rvea_: 1rve A: [33274]
    protein/DNA complex
  2. Domain d1rveb_: 1rve B: [33275]
    protein/DNA complex
22. Domains for 1stx:
  1. Domain d1stxa_: 1stx A: [98989]
    protein/DNA complex; complexed with mn; mutant
  2. Domain d1stxb_: 1stx B: [98990]
    protein/DNA complex; complexed with mn; mutant
23. Domains for 1suz:
  1. Domain d1suza_: 1suz A: [99013]
    protein/DNA complex; complexed with mg, na
  2. Domain d1suzb_: 1suz B: [99014]
    protein/DNA complex; complexed with mg, na
24. Domains for 1sx5:
  1. Domain d1sx5a_: 1sx5 A: [99023]
    protein/DNA complex; complexed with mn
  2. Domain d1sx5b_: 1sx5 B: [99024]
    protein/DNA complex; complexed with mn
25. Domains for 1sx8:
  1. Domain d1sx8a_: 1sx8 A: [99025]
    protein/DNA complex; complexed with mn
  2. Domain d1sx8b_: 1sx8 B: [99026]
    protein/DNA complex; complexed with mn
26. Domains for 2b0d:
  1. Domain d2b0da_: 2b0d A: [127634]
    automated match to d1az0a_
    protein/DNA complex; complexed with ca
  2. Domain d2b0db_: 2b0d B: [127635]
    automated match to d1az0a_
    protein/DNA complex; complexed with ca
27. Domains for 2b0e:
  1. Domain d2b0ea_: 2b0e A: [127636]
    automated match to d1az0a_
    protein/DNA complex; complexed with ca
  2. Domain d2b0eb_: 2b0e B: [127637]
    automated match to d1az0a_
    protein/DNA complex; complexed with ca
28. Domains for 2ge5:
  1. Domain d2ge5a_: 2ge5 A: [204349]
    automated match to d1az3a_
    protein/DNA complex; complexed with ca; mutant
  2. Domain d2ge5b_: 2ge5 B: [204350]
    automated match to d1az3a_
    protein/DNA complex; complexed with ca; mutant
29. Domains for 2rve:
  1. Domain d2rvea_: 2rve A: [33283]
    protein/DNA complex
  2. Domain d2rveb_: 2rve B: [33284]
    protein/DNA complex
30. Domains for 4rve:
  1. Domain d4rvea_: 4rve A: [33280]
    protein/DNA complex
  2. Domain d4rveb_: 4rve B: [33281]
    protein/DNA complex
  3. Domain d4rvec_: 4rve C: [33282]
    protein/DNA complex

More info for Protein Restriction endonuclease EcoRV from c.52.1.2: Restriction endonuclease EcoRV

Timeline for Protein Restriction endonuclease EcoRV from c.52.1.2: Restriction endonuclease EcoRV:

Protein Restriction endonuclease EcoRV from c.52.1.2: Restriction endonuclease EcoRV first appeared (with stable ids) in SCOP 1.55
Protein Restriction endonuclease EcoRV from c.52.1.2: Restriction endonuclease EcoRV appears in SCOPe 2.07