SCOPe 2.08: Domain d1eo3b_: 1eo3 B:

Lineage for d1eo3b_ (1eo3 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)

5. Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)
   automatically mapped to Pfam PF09233

6. Protein Restriction endonuclease EcoRV [52985] (1 species)

7. Species Escherichia coli [TaxId:562] [52986] (30 PDB entries)

8. Domain d1eo3b_: 1eo3 B: [33261]
   protein/DNA complex; complexed with acy, mg

Details for d1eo3b_

PDB Entry: 1eo3, 2 Å

PDB Description: inhibition of ecorv endonuclease by deoxyribo-3'-s-phosphorothiolates: a high resolution x-ray crystallographic study

PDB Compounds: (B:) Type II restriction enzyme EcoRV

SCOPe Domain Sequences for d1eo3b_:

Sequence, based on SEQRES records:

>d1eo3b_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdla
gsgnttnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy
rgrk

Sequence, based on observed residues (ATOM records):

>d1eo3b_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnekikftlggytsfirnntknivyp
fdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagsgnttni
gsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk

Timeline for d1eo3b_:

• d1eo3b_ first appeared (with stable ids) in SCOP 1.55
  
• d1eo3b_ appears in SCOPe 2.07