Lineage for d2b0db_ (2b0d B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2121131Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2121132Superfamily c.52.1: Restriction endonuclease-like [52980] (36 families) (S)
  5. 2121148Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)
    automatically mapped to Pfam PF09233
  6. 2121149Protein Restriction endonuclease EcoRV [52985] (1 species)
  7. 2121150Species Escherichia coli [TaxId:562] [52986] (30 PDB entries)
  8. 2121182Domain d2b0db_: 2b0d B: [127635]
    automated match to d1az0a_
    protein/DNA complex; complexed with ca

Details for d2b0db_

PDB Entry: 2b0d (more details), 2 Å

PDB Description: EcoRV Restriction Endonuclease/GAATTC/Ca2+
PDB Compounds: (B:) Type II restriction enzyme EcoRV

SCOPe Domain Sequences for d2b0db_:

Sequence, based on SEQRES records: (download)

>d2b0db_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdla
gsgnttnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy
rgrk

Sequence, based on observed residues (ATOM records): (download)

>d2b0db_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkekikftlggytsfirnntknivy
pfdqyiahwiigyvytrvatslktyninelneipkpykgvkvflqdkwviagdlagsgnt
tnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk

SCOPe Domain Coordinates for d2b0db_:

Click to download the PDB-style file with coordinates for d2b0db_.
(The format of our PDB-style files is described here.)

Timeline for d2b0db_: