Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily d.58.17: HMA, heavy metal-associated domain [55008] (2 families) (S)
  5. Family d.58.17.0: automated matches [191590] (1 protein)
    not a true family
  6. Protein automated matches [191063] (9 species)
    not a true protein

Species:

  1. Bacillus anthracis [TaxId:198094] [255401] (1 PDB entry)
  2. Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [334910] (1 PDB entry)
  3. Human (Homo sapiens) [TaxId:9606] [254969] (13 PDB entries)
    1. Domain for 1y3j:
    2. Domain for 1y3k:
    3. Domain for 1yjr:
    4. Domain for 1yjt:
    5. Domain for 1yju:
    6. Domain for 1yjv:
    7. Domains for 2ew9:
      1. Domain d2ew9a1: 2ew9 A:2-74 [241797]
        Other proteins in same PDB: d2ew9a3
        automated match to d1kvja_
      2. Domain d2ew9a2: 2ew9 A:75-149 [241798]
        Other proteins in same PDB: d2ew9a3
        automated match to d1kvja_
    8. Domain for 2lqb:
    9. Domain for 2n7y:
    10. Domains for 2rop:
      1. Domain d2ropa1: 2rop A:20-81 [243738]
        automated match to d1p6ta1
      2. Domain d2ropa2: 2rop A:128-190 [243739]
        automated match to d1p6ta2
    11. Domain for 2rsq:
    12. Domains for 6a71:
      1. Domain d6a71a_: 6a71 A: [367003]
        automated match to d2gcfa_
        complexed with 9ux, ca, gol, peg
      2. Domain d6a71b_: 6a71 B: [367004]
        automated match to d2gcfa_
        complexed with 9ux, ca, gol, peg
    13. Domains for 6a72:
      1. Domain d6a72a_: 6a72 A: [367017]
        automated match to d2gcfa_
        complexed with 9ux, ca
      2. Domain d6a72b_: 6a72 B: [367002]
        automated match to d2gcfa_
        complexed with 9ux, ca
  4. Pseudomonas aeruginosa [TaxId:287] [255374] (2 PDB entries)
    1. Domain for 2kt2:
    2. Domain for 2kt3:
  5. Synechocystis sp. PCC 6803 [TaxId:1148] [189441] (1 PDB entry)
  6. Synechocystis sp. [TaxId:1148] [255182] (3 PDB entries)
    1. Domain for 2gcf:
    2. Domain for 2ldi:
    3. Domain for 2ofh:
  7. Thale cress (Arabidopsis thaliana) [TaxId:3702] [188959] (1 PDB entry)
  8. Thermus thermophilus [TaxId:274] [255585] (2 PDB entries)
    1. Domain for 2roe:
    2. Domain for 2rog:
  9. Thermus thermophilus [TaxId:300852] [373308] (1 PDB entry)

More info for Protein automated matches from d.58.17.0: automated matches

Timeline for Protein automated matches from d.58.17.0: automated matches: