Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2146372Fold c.95: Thiolase-like [53900] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32451; strand 5 is antiparallel to the rest
  4. 2146373Superfamily c.95.1: Thiolase-like [53901] (3 families) (S)
  5. 2146374Family c.95.1.1: Thiolase-related [53902] (10 protein domains)
  6. 2146792Protein automated matches [231410] (2 species)
    not a true protein

Species:

  1. 2146793Escherichia coli [TaxId:562] [254877] (8 PDB entries)
    1. Domains for 1oeq:
      1. 2146794Domain d1oeqa3: 1oeq A:1-253 [302817]
        Other proteins in same PDB: d1oeqa4, d1oeqb4, d1oeqc4, d1oeqd4
        automated match to d1dd8a1
        complexed with hyd, nh4; mutant
      2. 2146795Domain d1oeqb3: 1oeq B:1-253 [302819]
        Other proteins in same PDB: d1oeqa4, d1oeqb4, d1oeqc4, d1oeqd4
        automated match to d1dd8a1
        complexed with hyd, nh4; mutant
      3. 2146796Domain d1oeqc3: 1oeq C:1-253 [302821]
        Other proteins in same PDB: d1oeqa4, d1oeqb4, d1oeqc4, d1oeqd4
        automated match to d1dd8a1
        complexed with hyd, nh4; mutant
      4. 2146797Domain d1oeqd3: 1oeq D:1-253 [302823]
        Other proteins in same PDB: d1oeqa4, d1oeqb4, d1oeqc4, d1oeqd4
        automated match to d1dd8a1
        complexed with hyd, nh4; mutant
    2. Domains for 1oer:
      1. 2146802Domain d1oera3: 1oer A:1-253 [302825]
        Other proteins in same PDB: d1oera4, d1oerb4, d1oerc4, d1oerd4
        automated match to d1dd8a1
        complexed with dao, nh4; mutant
      2. 2146803Domain d1oerb3: 1oer B:1-253 [302827]
        Other proteins in same PDB: d1oera4, d1oerb4, d1oerc4, d1oerd4
        automated match to d1dd8a1
        complexed with dao, nh4; mutant
      3. 2146804Domain d1oerc3: 1oer C:1-253 [302829]
        Other proteins in same PDB: d1oera4, d1oerb4, d1oerc4, d1oerd4
        automated match to d1dd8a1
        complexed with dao, nh4; mutant
      4. 2146805Domain d1oerd3: 1oer D:1-253 [302831]
        Other proteins in same PDB: d1oera4, d1oerb4, d1oerc4, d1oerd4
        automated match to d1dd8a1
        complexed with dao, nh4; mutant
    3. Domains for 2byw:
      1. 2146798Domain d2bywa1: 2byw A:1-253 [129498]
        Other proteins in same PDB: d2bywa2, d2bywb2, d2bywc2, d2bywd2
        automated match to d2bywa1
        complexed with nh4; mutant
      2. 2146799Domain d2bywb1: 2byw B:1-253 [129500]
        Other proteins in same PDB: d2bywa2, d2bywb2, d2bywc2, d2bywd2
        automated match to d2bywa1
        complexed with nh4; mutant
      3. 2146800Domain d2bywc1: 2byw C:1-253 [129502]
        Other proteins in same PDB: d2bywa2, d2bywb2, d2bywc2, d2bywd2
        automated match to d2bywa1
        complexed with nh4; mutant
      4. 2146801Domain d2bywd1: 2byw D:1-253 [129504]
        Other proteins in same PDB: d2bywa2, d2bywb2, d2bywc2, d2bywd2
        automated match to d2bywa1
        complexed with nh4; mutant
    4. Domains for 2byx:
      1. 2146810Domain d2byxa1: 2byx A:1-253 [129506]
        Other proteins in same PDB: d2byxa2, d2byxb2, d2byxc2, d2byxd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
      2. 2146811Domain d2byxb1: 2byx B:1-253 [129508]
        Other proteins in same PDB: d2byxa2, d2byxb2, d2byxc2, d2byxd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
      3. 2146812Domain d2byxc1: 2byx C:1-253 [129510]
        Other proteins in same PDB: d2byxa2, d2byxb2, d2byxc2, d2byxd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
      4. 2146813Domain d2byxd1: 2byx D:1-253 [129512]
        Other proteins in same PDB: d2byxa2, d2byxb2, d2byxc2, d2byxd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
    5. Domains for 2byy:
      1. 2146822Domain d2byya1: 2byy A:1-253 [129514]
        Other proteins in same PDB: d2byya2, d2byyb2, d2byyc2, d2byyd2
        automated match to d2bywa1
        complexed with nh4; mutant
      2. 2146823Domain d2byyb1: 2byy B:1-253 [129516]
        Other proteins in same PDB: d2byya2, d2byyb2, d2byyc2, d2byyd2
        automated match to d2bywa1
        complexed with nh4; mutant
      3. 2146824Domain d2byyc1: 2byy C:1-253 [129518]
        Other proteins in same PDB: d2byya2, d2byyb2, d2byyc2, d2byyd2
        automated match to d2bywa1
        complexed with nh4; mutant
      4. 2146825Domain d2byyd1: 2byy D:1-253 [129520]
        Other proteins in same PDB: d2byya2, d2byyb2, d2byyc2, d2byyd2
        automated match to d2bywa1
        complexed with nh4; mutant
    6. Domains for 2byz:
      1. 2146814Domain d2byza1: 2byz A:1-253 [129522]
        Other proteins in same PDB: d2byza2, d2byzb2, d2byzc2, d2byzd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
      2. 2146815Domain d2byzb1: 2byz B:1-253 [129524]
        Other proteins in same PDB: d2byza2, d2byzb2, d2byzc2, d2byzd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
      3. 2146816Domain d2byzc1: 2byz C:1-253 [129526]
        Other proteins in same PDB: d2byza2, d2byzb2, d2byzc2, d2byzd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
      4. 2146817Domain d2byzd1: 2byz D:1-253 [129528]
        Other proteins in same PDB: d2byza2, d2byzb2, d2byzc2, d2byzd2
        automated match to d2bywa1
        complexed with dao, nh4; mutant
    7. Domains for 2bz3:
      1. 2146818Domain d2bz3a1: 2bz3 A:1-253 [129534]
        Other proteins in same PDB: d2bz3a2, d2bz3b2, d2bz3c2, d2bz3d2
        automated match to d2bywa1
        complexed with dao, nh4, so4; mutant
      2. 2146819Domain d2bz3b1: 2bz3 B:1-253 [129536]
        Other proteins in same PDB: d2bz3a2, d2bz3b2, d2bz3c2, d2bz3d2
        automated match to d2bywa1
        complexed with dao, nh4, so4; mutant
      3. 2146820Domain d2bz3c1: 2bz3 C:1-253 [129538]
        Other proteins in same PDB: d2bz3a2, d2bz3b2, d2bz3c2, d2bz3d2
        automated match to d2bywa1
        complexed with dao, nh4, so4; mutant
      4. 2146821Domain d2bz3d1: 2bz3 D:1-253 [129540]
        Other proteins in same PDB: d2bz3a2, d2bz3b2, d2bz3c2, d2bz3d2
        automated match to d2bywa1
        complexed with dao, nh4, so4; mutant
    8. Domains for 2bz4:
      1. 2146806Domain d2bz4a1: 2bz4 A:1-253 [129542]
        Other proteins in same PDB: d2bz4a2, d2bz4b2, d2bz4c2, d2bz4d2
        automated match to d2bywa1
        complexed with nh4, so4; mutant
      2. 2146807Domain d2bz4b1: 2bz4 B:1-253 [129544]
        Other proteins in same PDB: d2bz4a2, d2bz4b2, d2bz4c2, d2bz4d2
        automated match to d2bywa1
        complexed with nh4, so4; mutant
      3. 2146808Domain d2bz4c1: 2bz4 C:1-253 [129546]
        Other proteins in same PDB: d2bz4a2, d2bz4b2, d2bz4c2, d2bz4d2
        automated match to d2bywa1
        complexed with nh4, so4; mutant
      4. 2146809Domain d2bz4d1: 2bz4 D:1-253 [129548]
        Other proteins in same PDB: d2bz4a2, d2bz4b2, d2bz4c2, d2bz4d2
        automated match to d2bywa1
        complexed with nh4, so4; mutant
  2. 2146826Zoogloea ramigera [TaxId:350] [231411] (6 PDB entries)
    1. Domains for 2wkt:
      1. 2146831Domain d2wkta1: 2wkt A:3-268 [231412]
        Other proteins in same PDB: d2wkta2, d2wktb2, d2wktc2, d2wktd2
        automated match to d1qfla1
        complexed with cl, coa, k, na, so4; mutant
      2. 2146832Domain d2wktb1: 2wkt B:4-268 [238950]
        Other proteins in same PDB: d2wkta2, d2wktb2, d2wktc2, d2wktd2
        automated match to d2wkta1
        complexed with cl, coa, k, na, so4; mutant
      3. 2146833Domain d2wktc1: 2wkt C:4-268 [238952]
        Other proteins in same PDB: d2wkta2, d2wktb2, d2wktc2, d2wktd2
        automated match to d2wkta1
        complexed with cl, coa, k, na, so4; mutant
      4. 2146834Domain d2wktd1: 2wkt D:4-268 [238954]
        Other proteins in same PDB: d2wkta2, d2wktb2, d2wktc2, d2wktd2
        automated match to d2wkta1
        complexed with cl, coa, k, na, so4; mutant
    2. Domains for 2wku:
      1. 2146839Domain d2wkua1: 2wku A:4-268 [231416]
        Other proteins in same PDB: d2wkua2, d2wkub2, d2wkuc2, d2wkud2
        automated match to d1qfla1
        complexed with dno, so4; mutant
      2. 2146840Domain d2wkub1: 2wku B:4-268 [238956]
        Other proteins in same PDB: d2wkua2, d2wkub2, d2wkuc2, d2wkud2
        automated match to d2wkua1
        complexed with dno, so4; mutant
      3. 2146841Domain d2wkuc1: 2wku C:4-268 [238958]
        Other proteins in same PDB: d2wkua2, d2wkub2, d2wkuc2, d2wkud2
        automated match to d2wkua1
        complexed with dno, so4; mutant
      4. 2146842Domain d2wkud1: 2wku D:4-268 [238960]
        Other proteins in same PDB: d2wkua2, d2wkub2, d2wkuc2, d2wkud2
        automated match to d2wkua1
        complexed with dno, so4; mutant
    3. Domains for 2wkv:
      1. 2146843Domain d2wkva1: 2wkv A:4-268 [231418]
        Other proteins in same PDB: d2wkva2, d2wkvb2, d2wkvc2, d2wkvd2
        automated match to d1qfla1
        complexed with coa, na, so4; mutant
      2. 2146844Domain d2wkvb1: 2wkv B:4-268 [231420]
        Other proteins in same PDB: d2wkva2, d2wkvb2, d2wkvc2, d2wkvd2
        automated match to d1qfla1
        complexed with coa, na, so4; mutant
      3. 2146845Domain d2wkvc1: 2wkv C:4-268 [238962]
        Other proteins in same PDB: d2wkva2, d2wkvb2, d2wkvc2, d2wkvd2
        automated match to d2wkva1
        complexed with coa, na, so4; mutant
      4. 2146846Domain d2wkvd1: 2wkv D:4-268 [238964]
        Other proteins in same PDB: d2wkva2, d2wkvb2, d2wkvc2, d2wkvd2
        automated match to d2wkva1
        complexed with coa, na, so4; mutant
    4. Domains for 2wl4:
      1. 2146835Domain d2wl4a1: 2wl4 A:4-268 [231424]
        Other proteins in same PDB: d2wl4a2, d2wl4b2, d2wl4c2, d2wl4d2
        automated match to d1qfla1
        complexed with cl, coa, na, so4; mutant
      2. 2146836Domain d2wl4b1: 2wl4 B:4-268 [231423]
        Other proteins in same PDB: d2wl4a2, d2wl4b2, d2wl4c2, d2wl4d2
        automated match to d1qfla1
        complexed with cl, coa, na, so4; mutant
      3. 2146837Domain d2wl4c1: 2wl4 C:4-268 [231422]
        Other proteins in same PDB: d2wl4a2, d2wl4b2, d2wl4c2, d2wl4d2
        automated match to d1qfla1
        complexed with cl, coa, na, so4; mutant
      4. 2146838Domain d2wl4d1: 2wl4 D:4-268 [238966]
        Other proteins in same PDB: d2wl4a2, d2wl4b2, d2wl4c2, d2wl4d2
        automated match to d2wl4c1
        complexed with cl, coa, na, so4; mutant
    5. Domains for 2wl5:
      1. 2146827Domain d2wl5a1: 2wl5 A:4-268 [231425]
        Other proteins in same PDB: d2wl5a2, d2wl5b2, d2wl5c2, d2wl5d2
        automated match to d1qfla1
        complexed with cl, coa, dno, na, so4; mutant
      2. 2146828Domain d2wl5b1: 2wl5 B:4-268 [238968]
        Other proteins in same PDB: d2wl5a2, d2wl5b2, d2wl5c2, d2wl5d2
        automated match to d2wl5a1
        complexed with cl, coa, dno, na, so4; mutant
      3. 2146829Domain d2wl5c1: 2wl5 C:4-268 [238970]
        Other proteins in same PDB: d2wl5a2, d2wl5b2, d2wl5c2, d2wl5d2
        automated match to d2wl5a1
        complexed with cl, coa, dno, na, so4; mutant
      4. 2146830Domain d2wl5d1: 2wl5 D:4-268 [238972]
        Other proteins in same PDB: d2wl5a2, d2wl5b2, d2wl5c2, d2wl5d2
        automated match to d2wl5a1
        complexed with cl, coa, dno, na, so4; mutant
    6. Domains for 2wl6:
      1. 2146847Domain d2wl6a1: 2wl6 A:4-268 [231430]
        Other proteins in same PDB: d2wl6a2
        automated match to d1qfla1
        mutant
      2. 2146848Domain d2wl6b1: 2wl6 B:4-268 [231433]
        Other proteins in same PDB: d2wl6a2
        automated match to d1qfla1
        mutant
      3. 2146849Domain d2wl6c1: 2wl6 C:4-268 [231432]
        Other proteins in same PDB: d2wl6a2
        automated match to d1qfla1
        mutant
      4. 2146850Domain d2wl6d1: 2wl6 D:4-268 [231434]
        Other proteins in same PDB: d2wl6a2
        automated match to d1qfla1
        mutant

More info for Protein automated matches from c.95.1.1: Thiolase-related

Timeline for Protein automated matches from c.95.1.1: Thiolase-related: