PDB entry 5kof

View 5kof on RCSB PDB site
Description: Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and Acyl Carrier Protein, AcpP
Class: transferase
Keywords: crosslinked, ketosynthase, ACP, complex, TRANSFERASE
Deposited on 2016-06-30, released 2018-01-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-oxoacyl-[acyl-carrier-protein] synthase 1
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A954 (1-406)
      • expression tag (0)
    Domains in SCOPe 2.08: d5kofa1, d5kofa2, d5kofa3
  • Chain 'B':
    Compound: 3-oxoacyl-[acyl-carrier-protein] synthase 1
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kofb1, d5kofb2
  • Chain 'C':
    Compound: Acyl carrier protein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kofc_
  • Chain 'D':
    Compound: Acyl carrier protein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5kofd_
  • Heterogens: 6W5, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5kofA (A:)
amkravitglgivssignnqqevlaslregrsgitfsqelkdsgmrshvwgnvkldttgl
idrkvvrfmsdasiyaflsmeqaiadaglspeayqnnprvgliagsgggsprfqvfgada
mrgprglkavgpyvvtkamasgvsaclatpfkihgvnysissacatsahcignaveqiql
gkqdivfagggeelcwemacefdamgalstkyndtpekasrtydahrdgfviaggggmvv
veelehalargahiyaeivgygatsdgadmvapsgegavrcmkmamhgvdtpidylnshg
tstpvgdvkelaairevfgdkspaisatkamtghslgaagvqeaiysllmlehgfiapsi
nieeldeqaaglnivtettdrelttvmsnsfgfggtnatlvmrklkd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5kofB (B:)
amkravitglgivssignnqqevlaslregrsgitfsqelkdsgmrshvwgnvkldttgl
idrkvvrfmsdasiyaflsmeqaiadaglspeayqnnprvgliagsgggsprfqvfgada
mrgprglkavgpyvvtkamasgvsaclatpfkihgvnysissacatsahcignaveqiql
gkqdivfagggeelcwemacefdamgalstkyndtpekasrtydahrdgfviaggggmvv
veelehalargahiyaeivgygatsdgadmvapsgegavrcmkmamhgvdtpidylnshg
tstpvgdvkelaairevfgdkspaisatkamtghslgaagvqeaiysllmlehgfiapsi
nieeldeqaaglnivtettdrelttvmsnsfgfggtnatlvmrklkd

    Sequence, based on observed residues (ATOM records): (download) 
    >5kofB (B:)
mkravitglgivssignnqqevlaslregrsgitfsqelkdsgmrshvwgnvkldttgli
drkvvrfmsdasiyaflsmeqaiadaglspeayqnnprvgliagsgggsprfqvfgadam
rgprglkavgpyvvtkamasgvsaclatpfkihgvnysissacatsahcignaveqiqlg
kqdivfagggeelcwemacefdamgalstkyndtpekasrtydahrdgfviaggggmvvv
eelehalargahiyaeivgygatsdgadmvapsgegavrcmkmamhgvdtpidylnshgt
stpvgdvkelaairevfgdkspaisatkamtghslgaagvqeaiysllmlehgfiapsin
ieeldeqaaglnivtettdrelttvmsnsfgfggtnatlvmrklk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5kofC (C:)
mstieervkkiigeqlgvkqeevtnnasfvedlgadsldtvelvmaleeefdteipdeea
ekittvqaaidyinghqa

    Sequence, based on observed residues (ATOM records): (download) 
    >5kofC (C:)
stieervkkiigeqlgvkqeevtnnasfvedlgadsldtvelvmaleeefdteipdeeae
kittvqaaidyingh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5kofD (D:)
mstieervkkiigeqlgvkqeevtnnasfvedlgadsldtvelvmaleeefdteipdeea
ekittvqaaidyinghqa

    Sequence, based on observed residues (ATOM records): (download) 
    >5kofD (D:)
mstieervkkiigeqlgvkqeevtnnasfvedlgadsldtvelvmaleeefdteipdeea
ekittvqaaidyingh