Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2467369Fold c.60: Phosphoglycerate mutase-like [53253] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 324156; strand 5 is antiparallel to the rest
  4. 2467370Superfamily c.60.1: Phosphoglycerate mutase-like [53254] (4 families) (S)
  5. 2467371Family c.60.1.1: Cofactor-dependent phosphoglycerate mutase [53255] (4 proteins)
  6. 2467423Protein automated matches [190196] (7 species)
    not a true protein

Species:

  1. 2467424Burkholderia pseudomallei [TaxId:28450] [188843] (3 PDB entries)
    1. Domains for 3gp3:
      1. 2467425Domain d3gp3a_: 3gp3 A: [176797]
        automated match to d1e59a_
        complexed with pg4, po3, sep
      2. 2467426Domain d3gp3b_: 3gp3 B: [176798]
        automated match to d1e59a_
        complexed with pg4, po3, sep
      3. 2467427Domain d3gp3c_: 3gp3 C: [176799]
        automated match to d1e59a_
        complexed with pg4, po3, sep
      4. 2467428Domain d3gp3d_: 3gp3 D: [176800]
        automated match to d1e59a_
        complexed with pg4, po3, sep
    2. Domains for 3gp5:
      1. 2467431Domain d3gp5a_: 3gp5 A: [176801]
        automated match to d1e59a_
        complexed with 3pg, pg4, pg6, vo4
      2. 2467432Domain d3gp5b_: 3gp5 B: [176802]
        automated match to d1e59a_
        complexed with 3pg, pg4, pg6, vo4
    3. Domains for 3gw8:
      1. 2467429Domain d3gw8a_: 3gw8 A: [177057]
        automated match to d1e59a_
        complexed with gol, pg4, vo4
      2. 2467430Domain d3gw8b_: 3gw8 B: [177058]
        automated match to d1e59a_
        complexed with gol, pg4, vo4
  2. 2467433Burkholderia pseudomallei [TaxId:320372] [188661] (3 PDB entries)
    1. Domains for 3ezn:
      1. 2467434Domain d3ezna_: 3ezn A: [175328]
        Other proteins in same PDB: d3eznb2
        automated match to d1e59a_
        complexed with pg4
      2. 2467435Domain d3eznb1: 3ezn B:1-230 [175329]
        Other proteins in same PDB: d3eznb2
        automated match to d1e59a_
        complexed with pg4
    2. Domains for 3fdz:
      1. 2467438Domain d3fdza_: 3fdz A: [175717]
        automated match to d1e59a_
        complexed with 3pg, dg2, peg
      2. 2467439Domain d3fdzb_: 3fdz B: [175718]
        automated match to d1e59a_
        complexed with 3pg, dg2, peg
    3. Domains for 3lnt:
      1. 2467436Domain d3lnta1: 3lnt A:1-244 [180424]
        Other proteins in same PDB: d3lnta2
        automated match to d1e59a_
        complexed with edo, mli, na
      2. 2467437Domain d3lntb_: 3lnt B: [180425]
        Other proteins in same PDB: d3lnta2
        automated match to d1e59a_
        complexed with edo, mli, na
  3. 2467440Cryptosporidium parvum [TaxId:353152] [188494] (1 PDB entry)
  4. 2467443Human (Homo sapiens) [TaxId:9606] [186938] (14 PDB entries)
    1. Domains for 1yfk:
      1. 2467462Domain d1yfka_: 1yfk A: [162191]
        automated match to d1e58a_
        complexed with cit, cl
      2. 2467463Domain d1yfkb_: 1yfk B: [162192]
        automated match to d1e58a_
        complexed with cit, cl
    2. Domains for 1yjx:
      1. 2467464Domain d1yjxa_: 1yjx A: [162219]
        automated match to d1e58a_
        complexed with cit, cl
      2. 2467465Domain d1yjxb_: 1yjx B: [162220]
        automated match to d1e58a_
        complexed with cit, cl
      3. 2467466Domain d1yjxc_: 1yjx C: [162221]
        automated match to d1e58a_
        complexed with cit, cl
      4. 2467467Domain d1yjxd_: 1yjx D: [162222]
        automated match to d1e58a_
        complexed with cit, cl
      5. 2467468Domain d1yjxe_: 1yjx E: [162223]
        automated match to d1e58a_
        complexed with cit, cl
      6. 2467469Domain d1yjxf_: 1yjx F: [162224]
        automated match to d1e58a_
        complexed with cit, cl
      7. 2467470Domain d1yjxg_: 1yjx G: [162225]
        automated match to d1e58a_
        complexed with cit, cl
      8. 2467471Domain d1yjxh_: 1yjx H: [162226]
        automated match to d1e58a_
        complexed with cit, cl
      9. 2467472Domain d1yjxi_: 1yjx I: [162227]
        automated match to d1e58a_
        complexed with cit, cl
      10. 2467473Domain d1yjxj_: 1yjx J: [162228]
        automated match to d1e58a_
        complexed with cit, cl
      11. 2467474Domain d1yjxk_: 1yjx K: [162229]
        automated match to d1e58a_
        complexed with cit, cl
      12. 2467475Domain d1yjxl_: 1yjx L: [162230]
        automated match to d1e58a_
        complexed with cit, cl
    3. Domains for 2a9j:
      1. 2467456Domain d2a9ja_: 2a9j A: [126440]
        automated match to d1t8pa_
        complexed with 3pg
      2. 2467457Domain d2a9jb_: 2a9j B: [126441]
        automated match to d1t8pa_
        complexed with 3pg
    4. Domains for 2f90:
      1. 2467452Domain d2f90a_: 2f90 A: [133148]
        automated match to d1t8pa_
        complexed with 3pg, alf
      2. 2467453Domain d2f90b_: 2f90 B: [133149]
        automated match to d1t8pa_
        complexed with 3pg, alf
    5. Domains for 2h4x:
      1. 2467446Domain d2h4xa_: 2h4x A: [136086]
        automated match to d1t8pa_
        complexed with 3pg
      2. 2467447Domain d2h4xb_: 2h4x B: [136087]
        automated match to d1t8pa_
        complexed with 3pg
    6. Domains for 2h4z:
      1. 2467460Domain d2h4za_: 2h4z A: [136088]
        automated match to d1t8pa_
        complexed with dg2
      2. 2467461Domain d2h4zb_: 2h4z B: [136089]
        automated match to d1t8pa_
        complexed with dg2
    7. Domains for 2h52:
      1. 2467450Domain d2h52a_: 2h52 A: [136114]
        automated match to d1t8pa_
        complexed with 3pg, hai
      2. 2467451Domain d2h52b_: 2h52 B: [136115]
        automated match to d1t8pa_
        complexed with 3pg, hai
    8. Domains for 2hhj:
      1. 2467448Domain d2hhja_: 2hhj A: [136497]
        automated match to d1t8pa_
        complexed with 3pg, dg2, hai
      2. 2467449Domain d2hhjb_: 2hhj B: [136498]
        automated match to d1t8pa_
        complexed with 3pg, dg2, hai
    9. Domains for 3nfy:
      1. 2467454Domain d3nfya_: 3nfy A: [182241]
        automated match to d1t8pa_
      2. 2467455Domain d3nfyb_: 3nfy B: [182242]
        automated match to d1t8pa_
    10. Domains for 4gpi:
      1. 2467458Domain d4gpib_: 4gpi B: [222082]
        automated match to d1yfka_
        complexed with cl
      2. 2467459Domain d4gpic_: 4gpi C: [222083]
        automated match to d1yjxa_
        complexed with cl
    11. Domains for 4gpz:
      1. 2467444Domain d4gpza_: 4gpz A: [193069]
        automated match to d1yjxa_
        complexed with cl, mes
      2. 2467445Domain d4gpzb_: 4gpz B: [202283]
        automated match to d1yjxa_
        complexed with cl, mes
    12. Domains for 5y2i:
      1. 3055784Domain d5y2ib_: 5y2i B: [355846]
        automated match to d2hhja_
        complexed with 8kx, cl, mes
      2. 3055827Domain d5y2ic_: 5y2i C: [355889]
        automated match to d2hhja_
        complexed with 8kx, cl, mes
    13. Domains for 5y2u:
      1. 3055847Domain d5y2uc_: 5y2u C: [355909]
        automated match to d2hhja_
        complexed with azn, cl, mes
      2. 3055899Domain d5y2ub_: 5y2u B: [355961]
        automated match to d2hhja_
        complexed with azn, cl, mes
    14. Domains for 5y35:
      1. 3055794Domain d5y35b_: 5y35 B: [355856]
        automated match to d2hhja_
        complexed with 8lf, cl, mes
      2. 3055797Domain d5y35c_: 5y35 C: [355859]
        automated match to d2hhja_
        complexed with 8lf, cl, mes
  5. 2467476Plasmodium falciparum [TaxId:36329] [189120] (1 PDB entry)
  6. 2467481Thermus thermophilus HB8 [TaxId:300852] [187129] (15 PDB entries)
    1. Domains for 2ekb:
      1. 2467493Domain d2ekba_: 2ekb A: [164129]
        automated match to d1v37a_
        complexed with na
      2. 2467494Domain d2ekbb_: 2ekb B: [164130]
        automated match to d1v37a_
        complexed with na
    2. Domains for 2ekz:
      1. 2467499Domain d2ekza_: 2ekz A: [164147]
        automated match to d1v37a_
      2. 2467500Domain d2ekzb_: 2ekz B: [164148]
        automated match to d1v37a_
    3. Domains for 2enu:
      1. 2467485Domain d2enua_: 2enu A: [164173]
        automated match to d1v37a_
        complexed with gol; mutant
      2. 2467486Domain d2enub_: 2enu B: [164174]
        automated match to d1v37a_
        complexed with gol; mutant
    4. Domains for 2enw:
      1. 2467506Domain d2enwa_: 2enw A: [164175]
        automated match to d1v37a_
        complexed with gol; mutant
      2. 2467507Domain d2enwb_: 2enw B: [164176]
        automated match to d1v37a_
        complexed with gol; mutant
    5. Domain for 2hia:
    6. Domains for 2owd:
      1. 2467487Domain d2owda_: 2owd A: [166874]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467488Domain d2owdb_: 2owd B: [166875]
        automated match to d1v37a_
        complexed with gol, na
    7. Domain for 2owe:
    8. Domains for 2p6o:
      1. 2467482Domain d2p6oa_: 2p6o A: [167037]
        automated match to d1v37a_
      2. 2467483Domain d2p6ob_: 2p6o B: [167038]
        automated match to d1v37a_
    9. Domains for 2p75:
      1. 2467489Domain d2p75a_: 2p75 A: [167044]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467490Domain d2p75b_: 2p75 B: [167045]
        automated match to d1v37a_
        complexed with gol, na
    10. Domains for 2p77:
      1. 2467502Domain d2p77a_: 2p77 A: [167046]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467503Domain d2p77b_: 2p77 B: [167047]
        automated match to d1v37a_
        complexed with gol, na
    11. Domains for 2p78:
      1. 2467497Domain d2p78a_: 2p78 A: [167048]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467498Domain d2p78b_: 2p78 B: [167049]
        automated match to d1v37a_
        complexed with gol, na
    12. Domains for 2p79:
      1. 2467495Domain d2p79a_: 2p79 A: [167050]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467496Domain d2p79b_: 2p79 B: [167051]
        automated match to d1v37a_
        complexed with gol, na
    13. Domains for 2p9y:
      1. 2467504Domain d2p9ya_: 2p9y A: [167090]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467505Domain d2p9yb_: 2p9y B: [167091]
        automated match to d1v37a_
        complexed with gol, na
    14. Domains for 2p9z:
      1. 2467491Domain d2p9za_: 2p9z A: [167092]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467492Domain d2p9zb_: 2p9z B: [167093]
        automated match to d1v37a_
        complexed with gol, na
    15. Domains for 2pa0:
      1. 2467508Domain d2pa0a_: 2pa0 A: [167094]
        automated match to d1v37a_
        complexed with cl, gol, na
      2. 2467509Domain d2pa0b_: 2pa0 B: [167095]
        automated match to d1v37a_
        complexed with cl, gol, na
  7. 2467510Thermus thermophilus [TaxId:274] [187977] (7 PDB entries)
    1. Domain for 1v7q:
    2. Domains for 2eoa:
      1. 2467516Domain d2eoaa_: 2eoa A: [164185]
        automated match to d1v37a_
      2. 2467517Domain d2eoab_: 2eoa B: [164186]
        automated match to d1v37a_
    3. Domain for 2p2y:
    4. Domains for 2p2z:
      1. 2467514Domain d2p2za_: 2p2z A: [166979]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467515Domain d2p2zb_: 2p2z B: [166980]
        automated match to d1v37a_
        complexed with gol, na
    5. Domain for 2p30:
    6. Domains for 2p6m:
      1. 2467518Domain d2p6ma_: 2p6m A: [167035]
        automated match to d1v37a_
        complexed with gol, na
      2. 2467519Domain d2p6mb_: 2p6m B: [167036]
        automated match to d1v37a_
        complexed with gol, na
    7. Domains for 2p9f:
      1. 2467512Domain d2p9fa_: 2p9f A: [167085]
        automated match to d1v37a_
        complexed with gol
      2. 2467513Domain d2p9fb_: 2p9f B: [167086]
        automated match to d1v37a_
        complexed with gol

More info for Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase

Timeline for Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase: