Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316393Superfamily a.28.1: ACP-like [47336] (4 families) (S)
  5. 2316513Family a.28.1.0: automated matches [191582] (1 protein)
    not a true family
  6. 2316514Protein automated matches [191038] (20 species)
    not a true protein

Species:

  1. 2316515Actinoplanes teichomyceticus [TaxId:1867] [268016] (2 PDB entries)
    1. Domain for 2mr7:
    2. Domain for 2mr8:
  2. 2316518Anaplasma phagocytophilum [TaxId:212042] [267793] (1 PDB entry)
  3. 2316520Bacillus subtilis [TaxId:1423] [256569] (3 PDB entries)
    1. Domain for 4bpf:
    2. Domains for 4bpg:
      1. 2316523Domain d4bpga1: 4bpg A:1-78 [256571]
        Other proteins in same PDB: d4bpga2, d4bpgb2
        automated match to d1hqba_
      2. 2316524Domain d4bpgb1: 4bpg B:1-78 [262532]
        Other proteins in same PDB: d4bpga2, d4bpgb2
        automated match to d4bpfa_
    3. Domain for 4bph:
  4. 2316525Brucella melitensis [TaxId:520466] [255402] (1 PDB entry)
  5. 2316527Enterococcus faecalis [TaxId:226185] [279836] (1 PDB entry)
  6. 2316529Escherichia coli [TaxId:83333] [335816] (1 PDB entry)
  7. 2316534Helicobacter pylori [TaxId:210] [324772] (1 PDB entry)
  8. 2316536Helicobacter pylori [TaxId:570508] [327571] (2 PDB entries)
    1. Domains for 5h9g:
      1. 2316540Domain d5h9ga1: 5h9g A:1-76 [327574]
        Other proteins in same PDB: d5h9ga2, d5h9gb2
        automated match to d3gzmb_
      2. 2316541Domain d5h9gb1: 5h9g B:1-75 [327588]
        Other proteins in same PDB: d5h9ga2, d5h9gb2
        automated match to d3gzmb_
    2. Domains for 5h9h:
      1. 2316537Domain d5h9ha_: 5h9h A: [327632]
        automated match to d3gzmb_
      2. 2316538Domain d5h9hb_: 5h9h B: [327572]
        automated match to d3gzmb_
      3. 2316539Domain d5h9hc_: 5h9h C: [327573]
        automated match to d3gzmb_
  9. 2316542Human (Homo sapiens) [TaxId:9606] [255120] (3 PDB entries)
    1. Domain for 2dnw:
    2. Domain for 5ool:
    3. Domain for 5oom:
  10. 2316546Leishmania major [TaxId:5664] [259666] (1 PDB entry)
  11. 2316548Lyme disease spirochete (Borrelia burgdorferi) [TaxId:139] [255384] (1 PDB entry)
  12. 2316550Malaria parasite (Plasmodium falciparum) [TaxId:5833] [188862] (2 PDB entries)
    1. Domain for 3gzl:
    2. Domains for 3gzm:
      1. 2316551Domain d3gzma_: 3gzm A: [177112]
        automated match to d1acpa_
        complexed with bme, mli, pns
      2. 2316552Domain d3gzmb_: 3gzm B: [177113]
        automated match to d1acpa_
        complexed with bme, mli, pns
  13. 2316554Mycobacterium tuberculosis [TaxId:83332] [255086] (1 PDB entry)
  14. 2316556Plasmodium falciparum [TaxId:36329] [255175] (2 PDB entries)
    1. Domain for 2fq0:
    2. Domain for 2fq2:
  15. 2316559Rickettsia prowazekii [TaxId:272947] [255452] (1 PDB entry)
  16. 2316561Spinach (Spinacia oleracea) [TaxId:3562] [255038] (5 PDB entries)
    1. Domain for 2ava:
    2. Domain for 2fva:
    3. Domain for 2fve:
    4. Domain for 2fvf:
    5. Domain for 2xz0:
  17. 2316567Staphylococcus aureus [TaxId:93062] [256240] (1 PDB entry)
  18. 2316574Streptomyces coelicolor [TaxId:100226] [255091] (1 PDB entry)
  19. 2316576Streptomyces coelicolor [TaxId:1902] [255367] (5 PDB entries)
    1. Domain for 2koo:
    2. Domain for 2kop:
    3. Domain for 2koq:
    4. Domain for 2kor:
    5. Domain for 2kos:
  20. 2316582Streptomyces sp. [TaxId:1001349] [258245] (2 PDB entries)
    1. Domain for 4pwv:
    2. Domains for 4pxh:
      1. 2316583Domain d4pxhb1: 4pxh B:6-78 [258778]
        Other proteins in same PDB: d4pxha_, d4pxhb2, d4pxhc_, d4pxhd2, d4pxhe_, d4pxhf2
        automated match to d1dnya_
        complexed with hem, kh4
      2. 2316584Domain d4pxhd1: 4pxh D:6-78 [258777]
        Other proteins in same PDB: d4pxha_, d4pxhb2, d4pxhc_, d4pxhd2, d4pxhe_, d4pxhf2
        automated match to d1dnya_
        complexed with hem, kh4
      3. 2316585Domain d4pxhf1: 4pxh F:6-78 [259097]
        Other proteins in same PDB: d4pxha_, d4pxhb2, d4pxhc_, d4pxhd2, d4pxhe_, d4pxhf2
        automated match to d1dnya_
        complexed with hem, kh4

More info for Protein automated matches from a.28.1.0: automated matches

Timeline for Protein automated matches from a.28.1.0: automated matches: