PDB entry 7vc0

View 7vc0 on RCSB PDB site
Description: Membrane arm of active state CI from Rotenone-NADH dataset
Class: electron transport
Keywords: Respiratory, Complex, ELECTRON TRANSPORT
Deposited on 2021-09-01, released 2022-04-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2022-04-06, with a file datestamp of 2022-04-01.
Experiment type: EM
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'Q':
  Compound: nadh dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A480JYS1 (0-43)
• Chain 'S':
  Compound: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot K7GR43 (0-69)
• Chain 'U':
  Compound: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A4X1VQ42 (0-82)
• Chain 'V':
  Compound: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot I3LGM4 (0-139)
• Chain 'W':
  Compound: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1S6Q1 (0-112)
• Chain 'X':
  Compound: acyl carrier protein, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0G781 (0-87)
  Domains in SCOPe 2.08: d7vc0x_
• Chain 'Y':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A4X1V766 (0-66)
• Chain 'Z':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A287AS93 (0-79)
• Chain 'a':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1SGC6 (0-137)
• Chain 'b':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q2EN80 (0-125)
• Chain 'c':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1RWL7 (0-155)
• Chain 'd':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A4X1VYV0 (0-174)
• Chain 'e':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • PDB 7VC0 (0-103)
• Chain 'f':
  Compound: NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A1XQS6 (0-48)
• Chain 'g':
  Compound: NADH dehydrogenase [ubiquinone] 1 subunit C2
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A480JRW3 (0-121)
• Chain 'h':
  Compound: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1SV23 (0-104)
• Chain 'i':
  Compound: NADH-ubiquinone oxidoreductase chain 2
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot O79875 (0-346)
• Chain 'j':
  Compound: NADH-ubiquinone oxidoreductase chain 3
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot O79880 (0-114)
• Chain 'k':
  Compound: NADH-ubiquinone oxidoreductase chain 4L
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P56632 (0-97)
• Chain 'l':
  Compound: NADH-ubiquinone oxidoreductase chain 5
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q71K68 (0-605)
• Chain 'm':
  Compound: NADH-ubiquinone oxidoreductase chain 6
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot O79882 (0-174)
• Chain 'n':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1SD73 (0-55)
• Chain 'o':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A4X1T6M0 (0-127)
• Chain 'p':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot A0A4X1T0A8 (0-177)
• Chain 'r':
  Compound: NADH-ubiquinone oxidoreductase chain 4
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q7IIB7 (0-458)
• Chain 's':
  Compound: NADH-ubiquinone oxidoreductase chain 1
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot O79874 (0-317)
• Chain 'u':
  Compound: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1SLR1 (0-170)
• Chain 'v':
  Compound: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1SCH1 (1-124)
    • acetylation (0)
• Chain 'w':
  Compound: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
  Species: Sus scrofa [TaxId:9823]
  Database cross-references and differences (RAF-indexed):
  • Uniprot F1SIS9 (0-319)
• Heterogens: 8Q1, ADP, CDL, MYR, PEE, PLX, UQ, HOH

PDB Chain Sequences:

• Chain 'Q':
  No sequence available.
  
  
• Chain 'S':
  No sequence available.
  
  
• Chain 'U':
  No sequence available.
  
  
• Chain 'V':
  No sequence available.
  
  
• Chain 'W':
  No sequence available.
  
  
• Chain 'X':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >7vc0X (X:)
  sdappltleaikdrvlyvlklydkidpeklsvnshfmkdlgldsldqveiimamedefgf
  eipdidaeklmcpqeivdyiadkkdvye
  

  
  
• Chain 'Y':
  No sequence available.
  
  
• Chain 'Z':
  No sequence available.
  
  
• Chain 'a':
  No sequence available.
  
  
• Chain 'b':
  No sequence available.
  
  
• Chain 'c':
  No sequence available.
  
  
• Chain 'd':
  No sequence available.
  
  
• Chain 'e':
  No sequence available.
  
  
• Chain 'f':
  No sequence available.
  
  
• Chain 'g':
  No sequence available.
  
  
• Chain 'h':
  No sequence available.
  
  
• Chain 'i':
  No sequence available.
  
  
• Chain 'j':
  No sequence available.
  
  
• Chain 'k':
  No sequence available.
  
  
• Chain 'l':
  No sequence available.
  
  
• Chain 'm':
  No sequence available.
  
  
• Chain 'n':
  No sequence available.
  
  
• Chain 'o':
  No sequence available.
  
  
• Chain 'p':
  No sequence available.
  
  
• Chain 'r':
  No sequence available.
  
  
• Chain 's':
  No sequence available.
  
  
• Chain 'u':
  No sequence available.
  
  
• Chain 'v':
  No sequence available.
  
  
• Chain 'w':
  No sequence available.