Lineage for Protein: Microbial and mitochondrial ADK, insert "zinc finger" domain

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2587435Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 2587451Superfamily g.41.2: Microbial and mitochondrial ADK, insert "zinc finger" domain [57774] (2 families) (S)
    automatically mapped to Pfam PF05191
  5. 2587452Family g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain [57775] (1 protein)
  6. 2587453Protein Microbial and mitochondrial ADK, insert "zinc finger" domain [57776] (9 species)

Species:

  1. 2587454Bacillus globisporus [TaxId:1459] [103619] (1 PDB entry)
  2. 2587456Bacillus stearothermophilus [TaxId:1422] [57777] (3 PDB entries)
    1. Domain for 1zin:
    2. Domain for 1zio:
    3. Domain for 1zip:
  3. 2587460Bacillus subtilis [TaxId:1423] [103618] (1 PDB entry)
  4. 2587462Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [57781] (4 PDB entries)
    contains a rudiment "zinc-finger" subdomain
    1. Domain for 1aky:
    2. Domains for 1dvr:
      1. 2587466Domain d1dvra2: 1dvr A:131-168 [45200]
        Other proteins in same PDB: d1dvra1, d1dvrb1
        complexed with atf; mutant
      2. 2587467Domain d1dvrb2: 1dvr B:131-168 [45201]
        Other proteins in same PDB: d1dvra1, d1dvrb1
        complexed with atf; mutant
    3. Domain for 2aky:
    4. Domain for 3aky:
  5. 2587468Cow (Bos taurus), mitochondrial izozyme-2 [TaxId:9913] [57780] (2 PDB entries)
    contains a rudiment "zinc-finger" subdomain
    1. Domain for 1ak2:
    2. Domain for 2ak2:
  6. 2587471Cow (Bos taurus), mitochondrial izozyme-3 [TaxId:9913] [57779] (1 PDB entry)
    contains a rudiment "zinc-finger" subdomain
  7. 2587474Escherichia coli [TaxId:1133853] [256828] (1 PDB entry)
  8. 2587477Escherichia coli [TaxId:562] [57778] (9 PDB entries)
    contains a rudiment form of the domain that lacks zn-binding site
    1. Domains for 1ake:
      1. 2587480Domain d1akea2: 1ake A:122-156 [45185]
        Other proteins in same PDB: d1akea1, d1akeb1
        complexed with ap5
      2. 2587481Domain d1akeb2: 1ake B:122-156 [45186]
        Other proteins in same PDB: d1akea1, d1akeb1
        complexed with ap5
    2. Domains for 1ank:
      1. 2587488Domain d1anka2: 1ank A:122-156 [45187]
        Other proteins in same PDB: d1anka1, d1ankb1
        complexed with amp, anp
      2. 2587489Domain d1ankb2: 1ank B:122-156 [45188]
        Other proteins in same PDB: d1anka1, d1ankb1
        complexed with amp, anp
    3. Domains for 1e4v:
      1. 2587484Domain d1e4va2: 1e4v A:122-156 [45183]
        Other proteins in same PDB: d1e4va1, d1e4vb1
        complexed with ap5; mutant
      2. 2587485Domain d1e4vb2: 1e4v B:122-156 [45184]
        Other proteins in same PDB: d1e4va1, d1e4vb1
        complexed with ap5; mutant
    4. Domains for 1e4y:
      1. 2587486Domain d1e4ya2: 1e4y A:122-156 [45181]
        Other proteins in same PDB: d1e4ya1, d1e4yb1
        complexed with ap5; mutant
      2. 2587487Domain d1e4yb2: 1e4y B:122-156 [45182]
        Other proteins in same PDB: d1e4ya1, d1e4yb1
        complexed with ap5; mutant
    5. Domains for 1eck:
      1. 2587490Domain d1ecka2: 1eck A:122-156 [302377]
        Other proteins in same PDB: d1ecka1, d1eckb1
        automated match to d1akea2
        complexed with adp, amp
      2. 2587491Domain d1eckb2: 1eck B:122-156 [302379]
        Other proteins in same PDB: d1ecka1, d1eckb1
        automated match to d1akea2
        complexed with adp, amp
    6. Domains for 2eck:
      1. 2587492Domain d2ecka2: 2eck A:122-156 [45191]
        Other proteins in same PDB: d2ecka1, d2eckb1
        complexed with adp, amp
      2. 2587493Domain d2eckb2: 2eck B:122-156 [45192]
        Other proteins in same PDB: d2ecka1, d2eckb1
        complexed with adp, amp
    7. Domains for 3hpq:
      1. 2587478Domain d3hpqa2: 3hpq A:122-156 [211183]
        Other proteins in same PDB: d3hpqa1, d3hpqb1
        automated match to d1akea2
        complexed with ap5
      2. 2587479Domain d3hpqb2: 3hpq B:122-156 [211185]
        Other proteins in same PDB: d3hpqa1, d3hpqb1
        automated match to d1akea2
        complexed with ap5
    8. Domains for 4ake:
      1. 2587482Domain d4akea2: 4ake A:122-156 [45189]
        Other proteins in same PDB: d4akea1, d4akeb1
      2. 2587483Domain d4akeb2: 4ake B:122-156 [45190]
        Other proteins in same PDB: d4akea1, d4akeb1
    9. Domain for 6f7u:
  9. 2587494Maize (Zea mays) [TaxId:4577] [57782] (1 PDB entry)

More info for Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain

Timeline for Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain:

  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain first appeared (with stable ids) in SCOP 1.55
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in SCOPe 2.06