Lineage for Fold g.41: Rubredoxin-like

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2587435Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

Superfamilies:

  1. 2587436g.41.1: Methionyl-tRNA synthetase (MetRS), Zn-domain [57770] (1 family) (S)
  2. 2587451g.41.2: Microbial and mitochondrial ADK, insert "zinc finger" domain [57774] (2 families) (S)
    automatically mapped to Pfam PF05191
  3. 2587508g.41.3: Zinc beta-ribbon [57783] (5 families) (S)
  4. 2587623g.41.4: Casein kinase II beta subunit [57798] (1 family) (S)
    automatically mapped to Pfam PF01214
  5. 2587651g.41.5: Rubredoxin-like [57802] (4 families) (S)
  6. 2587931g.41.6: Hypothetical protein MTH1184 [57821] (1 family) (S)
    contains two CXC motifs
    automatically mapped to Pfam PF09082
  7. 2587937g.41.7: Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain [57825] (2 families) (S)
    automatically mapped to Pfam PF02748
  8. 2588084g.41.8: Zn-binding ribosomal proteins [57829] (8 families) (S)
  9. 2588322g.41.9: RNA polymerase subunits [63393] (3 families) (S)
  10. 2588388g.41.10: Zn-finger domain of Sec23/24 [82919] (1 family) (S)
  11. 2588402g.41.11: Ran binding protein zinc finger-like [90209] (2 families) (S)
    contains CxxxxC-x(n)-CxxC zinc-binding site; similar to the Sec23/24 zinc finger domain
  12. 2588442g.41.13: Hypothetical protein Ta0289 C-terminal domain [103623] (1 family) (S)
    contains CxxC-x(n)-CxxxxC zinc-binding site; sequence similarity to NAD-dependent DNA ligase zinc-finger subdomain
  13. 2588448g.41.14: NADH pyrophosphatase intervening domain [116738] (1 family) (S)
    automatically mapped to Pfam PF09297
  14. 2588455g.41.15: NOB1 zinc finger-like [144206] (1 family) (S)
    automatically mapped to Pfam PF08772
  15. 2588460g.41.16: Nop10-like SnoRNP [144210] (1 family) (S)
    automatically mapped to Pfam PF04135
  16. 2588490g.41.17: CSL zinc finger [144217] (2 families) (S)
  17. 2588510g.41.18: YfgJ-like [161187] (1 family) (S)
    duplication: consists of two rubredoxin-like (sub)domains, interlocked together
    automatically mapped to Pfam PF07191

More info for Fold g.41: Rubredoxin-like

Timeline for Fold g.41: Rubredoxin-like: