Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2120592Fold c.50: Macro domain-like [52948] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
  4. 2120593Superfamily c.50.1: Macro domain-like [52949] (4 families) (S)
  5. 2120618Family c.50.1.2: Macro domain [89724] (7 protein domains)
    found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
  6. 2120661Protein automated matches [190472] (6 species)
    not a true protein

Species:

  1. 2120662Bacteroides thetaiotaomicron [TaxId:226186] [187703] (1 PDB entry)
  2. 2120664Escherichia coli [TaxId:562] [278890] (1 PDB entry)
  3. 2120683Escherichia coli [TaxId:83333] [278845] (2 PDB entries)
    1. Domain for 5cb3:
    2. Domains for 5cb5:
      1. 2120685Domain d5cb5a_: 5cb5 A: [278849]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      2. 2120686Domain d5cb5b_: 5cb5 B: [278848]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      3. 2120687Domain d5cb5c_: 5cb5 C: [278846]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      4. 2120688Domain d5cb5d_: 5cb5 D: [278853]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      5. 2120689Domain d5cb5e_: 5cb5 E: [278847]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      6. 2120690Domain d5cb5f_: 5cb5 F: [278856]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      7. 2120691Domain d5cb5g_: 5cb5 G: [278855]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      8. 2120692Domain d5cb5h_: 5cb5 H: [278861]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      9. 2120693Domain d5cb5i_: 5cb5 I: [278858]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      10. 2120694Domain d5cb5j_: 5cb5 J: [278857]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      11. 2120695Domain d5cb5k_: 5cb5 K: [278862]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      12. 2120696Domain d5cb5l_: 5cb5 L: [278860]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      13. 2120697Domain d5cb5m_: 5cb5 M: [278859]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      14. 2120698Domain d5cb5n_: 5cb5 N: [278865]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      15. 2120699Domain d5cb5o_: 5cb5 O: [278866]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      16. 2120700Domain d5cb5p_: 5cb5 P: [278868]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      17. 2120701Domain d5cb5q_: 5cb5 Q: [278872]
        automated match to d1spva_
        complexed with act, apr, so4, zod
      18. 2120702Domain d5cb5r_: 5cb5 R: [278871]
        automated match to d1spva_
        complexed with act, apr, so4, zod
  4. 2120703Human (Homo sapiens) [TaxId:9606] [189352] (1 PDB entry)
  5. 2120708Sars coronavirus tor2 [TaxId:227984] [187392] (1 PDB entry)
  6. 2120712SARS coronavirus [TaxId:227859] [187695] (1 PDB entry)

More info for Protein automated matches from c.50.1.2: Macro domain

Timeline for Protein automated matches from c.50.1.2: Macro domain: