Lineage for Family c.50.1.2: Macro domain

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2120592Fold c.50: Macro domain-like [52948] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
  4. 2120593Superfamily c.50.1: Macro domain-like [52949] (4 families) (S)
  5. 2120618Family c.50.1.2: Macro domain [89724] (7 protein domains)
    found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme

Protein Domains:

  1. 2120619Histone macro-H2a1.1 [142547] (2 species)
    1. 2120620Species Human (Homo sapiens) [TaxId:9606] [142549] (6 PDB entries)
      Uniprot O75367 179-367! Uniprot O75367 181-371
    2. 2120637Species Norway rat (Rattus norvegicus) [TaxId:10116] [142548] (1 PDB entry)
      Uniprot Q02874 180-370
  2. 2120639Hypothetical protein AF1521 [89725] (1 species)
    contains extra N-terminal strand
  3. 2120646Hypothetical protein BT1257 [142545] (1 species)
  4. 2120650Hypothetical protein YmbD [102530] (1 species)
  5. 2120653Hypothetical protein Ymr087W [110654] (1 species)
    contains structural variations at both termini
  6. 2120658Replicase polyprotein 1ab [142550] (1 species)
  7. 2120661automated matches [190472] (6 species)
    not a true protein
    1. 2120662Species Bacteroides thetaiotaomicron [TaxId:226186] [187703] (1 PDB entry)
    2. 2120664Species Escherichia coli [TaxId:562] [278890] (1 PDB entry)
    3. 2120683Species Escherichia coli [TaxId:83333] [278845] (2 PDB entries)
    4. 2120703Species Human (Homo sapiens) [TaxId:9606] [189352] (1 PDB entry)
    5. 2120708Species Sars coronavirus tor2 [TaxId:227984] [187392] (1 PDB entry)
    6. 2120712Species SARS coronavirus [TaxId:227859] [187695] (1 PDB entry)

More info for Family c.50.1.2: Macro domain

Timeline for Family c.50.1.2: Macro domain: