SCOPe 2.08: Protein: Histone macro-H2a1.1

Lineage for Protein: Histone macro-H2a1.1

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.50: Macro domain-like [52948] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
Superfamily c.50.1: Macro domain-like [52949] (4 families)
Family c.50.1.2: Macro domain [89724] (7 proteins)
found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
Protein Histone macro-H2a1.1 [142547] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [142549] (6 PDB entries)
Uniprot O75367 179-367! Uniprot O75367 181-371
1. Domains for 1zq0:
  1. Domain d1zq0a_: 1zq0 A: [303470]
    automated match to d2fxka1
  2. Domain d1zq0b_: 1zq0 B: [303471]
    automated match to d2fxka1
  3. Domain d1zq0c_: 1zq0 C: [303472]
    automated match to d2fxka1
  4. Domain d1zq0d_: 1zq0 D: [303473]
    automated match to d2fxka1
2. Domains for 1zr3:
  1. Domain d1zr3a_: 1zr3 A: [125513]
    automated match to d2fxka1
    complexed with mes
  2. Domain d1zr3b_: 1zr3 B: [125514]
    automated match to d2fxka1
    complexed with mes
  3. Domain d1zr3c_: 1zr3 C: [125515]
    automated match to d2fxka1
    complexed with mes
  4. Domain d1zr3d_: 1zr3 D: [125516]
    automated match to d2fxka1
    complexed with mes
3. Domains for 1zr5:
  1. Domain d1zr5a1: 1zr5 A:179-367 [125525]
  2. Domain d1zr5b_: 1zr5 B: [125526]
    automated match to d1zr5a1
4. Domains for 2fxk:
  1. Domain d2fxka1: 2fxk A:182-368 [134323]
    isoform 1
  2. Domain d2fxkb_: 2fxk B: [134324]
    automated match to d2fxka1
5. Domain for 3iid:
  - Domain d3iida_: 3iid A: [211708]
    automated match to d2fxka1
    protein/DNA complex; complexed with apr, no3
6. Domains for 3iif:
  1. Domain d3iifa_: 3iif A: [211709]
    automated match to d2fxka1
    protein/DNA complex; complexed with apr
  2. Domain d3iifb_: 3iif B: [211710]
    automated match to d2fxka1
    protein/DNA complex; complexed with apr
  3. Domain d3iifc_: 3iif C: [211711]
    automated match to d2fxka1
    protein/DNA complex; complexed with apr
Norway rat (Rattus norvegicus) [TaxId:10116] [142548] (1 PDB entry)
Uniprot Q02874 180-370
- Domain for 1yd9:
  - Domain d1yd9a1: 1yd9 A:6-193 [122976]
    Other proteins in same PDB: d1yd9b_, d1yd9c2, d1yd9c3, d1yd9d_
    Isoform 1
    complexed with au

More info for Protein Histone macro-H2a1.1 from c.50.1.2: Macro domain

Timeline for Protein Histone macro-H2a1.1 from c.50.1.2: Macro domain:

Protein Histone macro-H2a1.1 from c.50.1.2: Macro domain first appeared in SCOP 1.73
Protein Histone macro-H2a1.1 from c.50.1.2: Macro domain appears in SCOPe 2.07