Lineage for d5sqva_ (5sqv A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2881110Fold c.50: Macro domain-like [52948] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
  4. 2881111Superfamily c.50.1: Macro domain-like [52949] (4 families) (S)
  5. 2881136Family c.50.1.2: Macro domain [89724] (7 proteins)
    found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
  6. 2881179Protein automated matches [190472] (8 species)
    not a true protein
  7. 2881238Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382213] (283 PDB entries)
  8. 3087203Domain d5sqva_: 5sqv A: [423520]
    Other proteins in same PDB: d5sqvb2
    automated match to d6z5ta_
    complexed with qvx

Details for d5sqva_

PDB Entry: 5sqv (more details), 1.05 Å

PDB Description: pandda analysis group deposition -- crystal structure of sars-cov-2 nsp3 macrodomain in complex with z5010894399 - (s,s) isomer
PDB Compounds: (A:) non-structural protein 3

SCOPe Domain Sequences for d5sqva_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5sqva_ c.50.1.2 (A:) automated matches {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
vnsfsgylkltdnvyiknadiveeakkvkptvvvnaanvylkhgggvagalnkatnnamq
vesddyiatngplkvggscvlsghnlakhclhvvgpnvnkgediqllksayenfnqhevl
lapllsagifgadpihslrvcvdtvrtnvylavfdknlydklvssfl

SCOPe Domain Coordinates for d5sqva_:

Click to download the PDB-style file with coordinates for d5sqva_.
(The format of our PDB-style files is described here.)

Timeline for d5sqva_:

  • d5sqva_ is new in SCOPe 2.08-stable