Species:

1. Anabaena sp. [TaxId:1168] [226793] (1 PDB entry)

   • Domain for 2x3u:

     • Domain d2x3ua2: 2x3u A:140-303 [207122] Other proteins in same PDB: d2x3ua1 automated match to d1frna2 complexed with fad, gol, so4; mutant

2. Bacillus megaterium [TaxId:1404] [226323] (2 PDB entries)

   1. Domains for 4dqk:

      1. Domain d4dqka2: 4dqk A:888-1048 [219937] Other proteins in same PDB: d4dqka1, d4dqkb1 automated match to d1tlla3 complexed with fad, pg4, so4

      2. Domain d4dqkb2: 4dqk B:888-1048 [219939] Other proteins in same PDB: d4dqka1, d4dqkb1 automated match to d1tlla3 complexed with fad, pg4, so4

   2. Domains for 4dql:

      1. Domain d4dqla2: 4dql A:888-1049 [219941] Other proteins in same PDB: d4dqla1, d4dqlb1 automated match to d1tlla3 complexed with 1pe, fad, nap, pg4, so4

      2. Domain d4dqlb2: 4dql B:888-1049 [219943] Other proteins in same PDB: d4dqla1, d4dqlb1 automated match to d1tlla3 complexed with 1pe, fad, nap, pg4, so4

3. Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255833] (1 PDB entry)

   • Domain for 3fjo:

     • Domain d3fjoa3: 3fjo A:499-657 [246160] Other proteins in same PDB: d3fjoa1, d3fjoa2 automated match to d1j9za3 complexed with fad, fmn

4. Burkholderia thailandensis [TaxId:271848] [226397] (2 PDB entries)

   1. Domains for 4f7d:

      1. Domain d4f7da2: 4f7d A:116-270 [221057] Other proteins in same PDB: d4f7da1, d4f7db1 automated match to d1a8pa2

      2. Domain d4f7db2: 4f7d B:116-271 [221059] Other proteins in same PDB: d4f7da1, d4f7db1 automated match to d1a8pa2

   2. Domains for 4fk8:

      1. Domain d4fk8a2: 4fk8 A:116-271 [221245] Other proteins in same PDB: d4fk8a1, d4fk8b1 automated match to d1a8pa2 complexed with fad

      2. Domain d4fk8b2: 4fk8 B:116-271 [221247] Other proteins in same PDB: d4fk8a1, d4fk8b1 automated match to d1a8pa2 complexed with fad

5. Human (Homo sapiens) [TaxId:9606] [226188] (5 PDB entries)

   1. Domains for 3qe2:

      1. Domain d3qe2a3: 3qe2 A:522-680 [248859] Other proteins in same PDB: d3qe2a1, d3qe2a2, d3qe2b1, d3qe2b2 automated match to d1j9za3 complexed with ca, fad, fmn, nap

      2. Domain d3qe2b3: 3qe2 B:522-680 [248862] Other proteins in same PDB: d3qe2a1, d3qe2a2, d3qe2b1, d3qe2b2 automated match to d1j9za3 complexed with ca, fad, fmn, nap

   2. Domains for 3qfc:

      1. Domain d3qfca3: 3qfc A:522-680 [248871] Other proteins in same PDB: d3qfca1, d3qfca2, d3qfcb1, d3qfcb2 automated match to d1j9za3 complexed with ca, fad, fmn, nap; mutant

      2. Domain d3qfcb3: 3qfc B:522-680 [248874] Other proteins in same PDB: d3qfca1, d3qfca2, d3qfcb1, d3qfcb2 automated match to d1j9za3 complexed with ca, fad, fmn, nap; mutant

   3. Domains for 3qfr:

      1. Domain d3qfra3: 3qfr A:522-680 [248877] Other proteins in same PDB: d3qfra1, d3qfra2, d3qfrb1, d3qfrb2 automated match to d1j9za3 complexed with ca, fad, fmn, nap; mutant

      2. Domain d3qfrb3: 3qfr B:522-680 [248880] Other proteins in same PDB: d3qfra1, d3qfra2, d3qfrb1, d3qfrb2 automated match to d1j9za3 complexed with ca, fad, fmn, nap; mutant

   4. Domain for 3qfs:

      • Domain d3qfsa2: 3qfs A:522-680 [215217] Other proteins in same PDB: d3qfsa1 automated match to d1ja1a3 complexed with fad, nap

   5. Domain for 3qft:

      • Domain d3qfta2: 3qft A:522-680 [215219] Other proteins in same PDB: d3qfta1 automated match to d1ja1a3 complexed with fad, nap; mutant

6. Leptospira interrogans [TaxId:173] [225434] (2 PDB entries)

   1. Domains for 2rc5:

      1. Domain d2rc5a2: 2rc5 A:159-314 [206043] Other proteins in same PDB: d2rc5a1, d2rc5b1, d2rc5c1, d2rc5d1 automated match to d1qufa2 complexed with fad, so4, zn

      2. Domain d2rc5b2: 2rc5 B:159-314 [206045] Other proteins in same PDB: d2rc5a1, d2rc5b1, d2rc5c1, d2rc5d1 automated match to d1qufa2 complexed with fad, so4, zn

      3. Domain d2rc5c2: 2rc5 C:159-314 [206047] Other proteins in same PDB: d2rc5a1, d2rc5b1, d2rc5c1, d2rc5d1 automated match to d1qufa2 complexed with fad, so4, zn

      4. Domain d2rc5d2: 2rc5 D:159-314 [206049] Other proteins in same PDB: d2rc5a1, d2rc5b1, d2rc5c1, d2rc5d1 automated match to d1qufa2 complexed with fad, so4, zn

   2. Domains for 2rc6:

      1. Domain d2rc6a2: 2rc6 A:159-314 [206051] Other proteins in same PDB: d2rc6a1, d2rc6b1, d2rc6c1, d2rc6d1 automated match to d1qufa2 complexed with fad, nap, so4, zn

      2. Domain d2rc6b2: 2rc6 B:159-314 [206053] Other proteins in same PDB: d2rc6a1, d2rc6b1, d2rc6c1, d2rc6d1 automated match to d1qufa2 complexed with fad, nap, so4, zn

      3. Domain d2rc6c2: 2rc6 C:159-314 [206055] Other proteins in same PDB: d2rc6a1, d2rc6b1, d2rc6c1, d2rc6d1 automated match to d1qufa2 complexed with fad, nap, so4, zn

      4. Domain d2rc6d2: 2rc6 D:159-314 [206057] Other proteins in same PDB: d2rc6a1, d2rc6b1, d2rc6c1, d2rc6d1 automated match to d1qufa2 complexed with fad, nap, so4, zn

7. Maize (Zea mays) [TaxId:4577] [226538] (5 PDB entries)

   1. Domain for 3lo8:

      • Domain d3lo8a2: 3lo8 A:157-316 [212980] Other proteins in same PDB: d3lo8a1 automated match to d1frna2 complexed with fad, na

   2. Domain for 3lvb:

      • Domain d3lvba2: 3lvb A:157-316 [213074] Other proteins in same PDB: d3lvba1 automated match to d1frna2 complexed with fad

   3. Domains for 3vo1:

      1. Domain d3vo1a2: 3vo1 A:155-314 [217946] Other proteins in same PDB: d3vo1a1, d3vo1b1 automated match to d1frna2 complexed with fad

      2. Domain d3vo1b2: 3vo1 B:155-314 [217948] Other proteins in same PDB: d3vo1a1, d3vo1b1 automated match to d1frna2 complexed with fad

   4. Domains for 3vo2:

      1. Domain d3vo2a2: 3vo2 A:155-314 [217950] Other proteins in same PDB: d3vo2a1, d3vo2b1 automated match to d1frna2 complexed with fad

      2. Domain d3vo2b2: 3vo2 B:160-314 [217952] Other proteins in same PDB: d3vo2a1, d3vo2b1 automated match to d1qfza2 complexed with fad

   5. Domains for 3w5u:

      1. Domain d3w5ua2: 3w5u A:155-314 [201273] Other proteins in same PDB: d3w5ua1, d3w5ub_, d3w5uc1, d3w5ud_, d3w5ue1, d3w5uf_, d3w5ug1, d3w5uh_ automated match to d1frna2 complexed with fad, fes

      2. Domain d3w5uc2: 3w5u C:155-314 [201275] Other proteins in same PDB: d3w5ua1, d3w5ub_, d3w5uc1, d3w5ud_, d3w5ue1, d3w5uf_, d3w5ug1, d3w5uh_ automated match to d1frna2 complexed with fad, fes

      3. Domain d3w5ue2: 3w5u E:155-314 [201278] Other proteins in same PDB: d3w5ua1, d3w5ub_, d3w5uc1, d3w5ud_, d3w5ue1, d3w5uf_, d3w5ug1, d3w5uh_ automated match to d1frna2 complexed with fad, fes

      4. Domain d3w5ug2: 3w5u G:155-314 [201281] Other proteins in same PDB: d3w5ua1, d3w5ub_, d3w5uc1, d3w5ud_, d3w5ue1, d3w5uf_, d3w5ug1, d3w5uh_ automated match to d1frna2 complexed with fad, fes

8. Norway rat (Rattus norvegicus) [TaxId:10116] [256001] (2 PDB entries)

   1. Domain for 3ojw:

      • Domain d3ojwa3: 3ojw A:519-678 [248309] Other proteins in same PDB: d3ojwa1, d3ojwa2 automated match to d1j9za3 complexed with fad, fmn

   2. Domain for 3ojx:

      • Domain d3ojxa3: 3ojx A:519-678 [248312] Other proteins in same PDB: d3ojxa1, d3ojxa2 automated match to d1j9za3 complexed with fad, fmn, nap

9. Nostoc sp. [TaxId:1168] [225653] (2 PDB entries)

   1. Domain for 2vyq:

      • Domain d2vyqa2: 2vyq A:140-303 [206539] Other proteins in same PDB: d2vyqa1 automated match to d1frna2 complexed with fad, gol, so4; mutant

   2. Domain for 2vzl:

      • Domain d2vzla2: 2vzl A:140-303 [206545] Other proteins in same PDB: d2vzla1 automated match to d1frna2 complexed with fad, gol, nad; mutant

10. Ralstonia eutropha [TaxId:381666] [256011] (3 PDB entries)

    1. Domain for 3ozu:

       • Domain d3ozua3: 3ozu A:262-403 [248381] Other proteins in same PDB: d3ozua1, d3ozua2 automated match to d1cqxa3 complexed with fad, hem, po4, x89

    2. Domains for 3ozv:

       1. Domain d3ozva3: 3ozv A:262-403 [248384] Other proteins in same PDB: d3ozva1, d3ozva2, d3ozvb1, d3ozvb2 automated match to d1cqxa3 complexed with dgg, ecn, fad, hem, po4

       2. Domain d3ozvb3: 3ozv B:262-403 [248387] Other proteins in same PDB: d3ozva1, d3ozva2, d3ozvb1, d3ozvb2 automated match to d1cqxa3 complexed with dgg, ecn, fad, hem, po4

    3. Domains for 3ozw:

       1. Domain d3ozwa3: 3ozw A:262-403 [248390] Other proteins in same PDB: d3ozwa1, d3ozwa2, d3ozwb1, d3ozwb2 automated match to d1cqxa3 complexed with dgg, fad, hem, kkk, po4

       2. Domain d3ozwb3: 3ozw B:262-403 [248393] Other proteins in same PDB: d3ozwa1, d3ozwa2, d3ozwb1, d3ozwb2 automated match to d1cqxa3 complexed with dgg, fad, hem, kkk, po4

11. Rhodobacter capsulatus [TaxId:1061] [225020] (7 PDB entries)

    1. Domain for 2bgi:

       • Domain d2bgia2: 2bgi A:114-272 [203595] Other proteins in same PDB: d2bgia1 automated match to d1a8pa2 complexed with co2, fad, htg, so4

    2. Domains for 2bgj:

       1. Domain d2bgja2: 2bgj A:114-272 [203597] Other proteins in same PDB: d2bgja1, d2bgjb1, d2bgjc1, d2bgjd1 automated match to d1a8pa2 complexed with fad

       2. Domain d2bgjb2: 2bgj B:114-272 [203599] Other proteins in same PDB: d2bgja1, d2bgjb1, d2bgjc1, d2bgjd1 automated match to d1a8pa2 complexed with fad

       3. Domain d2bgjc2: 2bgj C:114-272 [203601] Other proteins in same PDB: d2bgja1, d2bgjb1, d2bgjc1, d2bgjd1 automated match to d1a8pa2 complexed with fad

       4. Domain d2bgjd2: 2bgj D:114-272 [203603] Other proteins in same PDB: d2bgja1, d2bgjb1, d2bgjc1, d2bgjd1 automated match to d1a8pa2 complexed with fad

    3. Domain for 2vnh:

       • Domain d2vnha2: 2vnh A:114-272 [206384] Other proteins in same PDB: d2vnha1 automated match to d1a8pa2 complexed with fad, htg, nap

    4. Domain for 2vni:

       • Domain d2vnia2: 2vni A:114-272 [206386] Other proteins in same PDB: d2vnia1 automated match to d1a8pa2 complexed with a2p, fad, htg

    5. Domain for 2vnj:

       • Domain d2vnja2: 2vnj A:114-272 [206388] Other proteins in same PDB: d2vnja1 automated match to d1a8pa2 complexed with fad, htg, nap

    6. Domains for 2vnk:

       1. Domain d2vnka2: 2vnk A:114-272 [206390] Other proteins in same PDB: d2vnka1, d2vnkb1, d2vnkc1, d2vnkd1 automated match to d1a8pa2 complexed with fad, nap

       2. Domain d2vnkb2: 2vnk B:114-269 [206392] Other proteins in same PDB: d2vnka1, d2vnkb1, d2vnkc1, d2vnkd1 automated match to d1a8pa2 complexed with fad, nap

       3. Domain d2vnkc2: 2vnk C:114-272 [206394] Other proteins in same PDB: d2vnka1, d2vnkb1, d2vnkc1, d2vnkd1 automated match to d1a8pa2 complexed with fad, nap

       4. Domain d2vnkd2: 2vnk D:114-269 [206396] Other proteins in same PDB: d2vnka1, d2vnkb1, d2vnkc1, d2vnkd1 automated match to d1a8pa2 complexed with fad, nap

    7. Domains for 4k1x:

       1. Domain d4k1xa2: 4k1x A:114-266 [228950] Other proteins in same PDB: d4k1xa1, d4k1xb1 automated match to d2vnha2 complexed with fad, so4; mutant

       2. Domain d4k1xb2: 4k1x B:114-266 [235078] Other proteins in same PDB: d4k1xa1, d4k1xb1 automated match to d4k1xa2 complexed with fad, so4; mutant

12. Slime mold (Physarum polycephalum) [TaxId:5791] [225254] (1 PDB entry)

    • Domains for 2eix:

      1. Domain d2eixa2: 2eix A:151-281 [204128] Other proteins in same PDB: d2eixa1, d2eixb1 automated match to d1qx4a2 complexed with fad, gol, iod, na

      2. Domain d2eixb2: 2eix B:151-281 [204130] Other proteins in same PDB: d2eixa1, d2eixb1 automated match to d1qx4a2 complexed with fad, gol, iod, na

13. Synechococcus sp. [TaxId:32049] [225028] (1 PDB entry)

    • Domains for 2b5o:

      1. Domain d2b5oa2: 2b5o A:243-402 [203558] Other proteins in same PDB: d2b5oa1, d2b5ob1 automated match to d1frna2 complexed with fad, so4

      2. Domain d2b5ob2: 2b5o B:243-402 [203560] Other proteins in same PDB: d2b5oa1, d2b5ob1 automated match to d1frna2 complexed with fad, so4

14. Vibrio cholerae [TaxId:243277] [226358] (1 PDB entry)

    • Domains for 4eh1:

      1. Domain d4eh1a2: 4eh1 A:111-238 [220537] Other proteins in same PDB: d4eh1a1, d4eh1b1 automated match to d1gvha3 complexed with cl, fad, gol, so4

      2. Domain d4eh1b2: 4eh1 B:111-239 [220539] Other proteins in same PDB: d4eh1a1, d4eh1b1 automated match to d1gvha3 complexed with cl, fad, gol, so4

15. Xanthomonas axonopodis [TaxId:190486] [234121] (1 PDB entry)

    • Domain for 4b4d:

      • Domain d4b4da2: 4b4d A:102-259 [234122] Other proteins in same PDB: d4b4da1 automated match to d1a8pa2 complexed with cl, fad

More info for Protein automated matches from c.25.1.0: automated matches

Timeline for Protein automated matches from c.25.1.0: automated matches:

• Protein automated matches from c.25.1.0: automated matches first appeared in SCOPe 2.03
  
• Protein automated matches from c.25.1.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from c.25.1.0: automated matches appears in the current release, SCOPe 2.08